Abstract
Microplastic (MP) pollution in agricultural soils, resulting from the use of plastic mulch, compost, and sewage sludge, jeopardizes the soil microbial populations. However, the effects of MPs on soil chemical properties and microbial communities remain largely unknown. Here, we investigated the effects of different concentration levels (0, 0.1, 1, 3, 5, and 7%; w:w) of low-density polyethylene (LDPE) MPs on the chemical properties and bacterial communities of agricultural soil in an incubation study. The addition of LDPE MPs did not drastically change soil pH (ranging from 8.22 to 8.42). Electrical conductivity increased significantly when the LDPE MP concentrations were between 1 and 7%, whereas the total exchangeable cations (Na+, K+, Mg2+, and Ca2+) decreased significantly at higher LDPE MP concentrations (3–7%). The highest available phosphorus content (2.13 mg kg−1) was observed in 0.1% LDPE MP. Bacterial richness (Chao1 and Ace indices) was the lowest at 0.1% LDPE MP, and diversity indices (Shannon and Invsimpson) were higher at 0 and 1% LDPE MP than at other concentrations. The effect of LDPE MP concentrations on bacterial phyla remained unchanged, but the bacterial abundance varied. The relative abundance of Proteobacteria (25.8–33.0%) was the highest in all treatments. The abundance of Acidobacteria (15.8–17.2%) was also high, particularly in the 0, 0.1, and 1% LDPE MPs. With the increase in LDPE MP concentration, the abundance of Actinobacteria gradually increased from 7.80 to 31.8%. Our findings suggest that different MP concentration levels considerably alter soil chemical properties and microbial composition, which may potentially change the ecological functions of soil ecosystems.
Similar content being viewed by others
Explore related subjects
Discover the latest articles, news and stories from top researchers in related subjects.Introduction
Global plastic production has surged from 1.5 million metric tons (Mt) to 367 million Mt over the last 70 years (1950–2020)1. The increased use of plastic mulch has resulted in the accumulation of plastic materials in agricultural lands2, 3. In China, nearly 20 million hectares of agricultural land are covered with plastic mulch films, and the quantity of plastic mulch reached 1.25 million tons in 20114. Nearly 79% of global plastic waste is piled in landfills5, and soil serves as a large sink for microplastics (MPs)6, 7. Moreover, the application of sewage sludge as a fertilizer can introduce MPs into agricultural lands8. It has been estimated that 63,000–430,000 tons and 44,000–300,000 tons of MPs can enter the soil annually in European and North American agricultural lands, respectively9. In addition, the weathering of plastics accumulated in the soil can generate MPs and nanoplastics, which may be harmful to various ecosystems10, 11. MP (≤ 5 mm fragments) contamination was listed among the top 10 environmental problems by the United Nations Environment Program in 20146. MPs can negatively affect various soil properties because of their persistent characteristics that pose a threat to important terrestrial ecosystems12, 13. However, the pollution risks and environmental impacts of MPs on agricultural soils have not been well documented, although they have received increasing global attention14,15,16,17.
Polyethylene (PE) is a polymer widely used to produce mulch films and other plastic products used in agriculture18. Low-density polyethylene (LDPE), a synthetic resin manufactured by polymerizing ethylene, is used in agriculture, such as in greenhouses and for mulching19. LDPE is commonly used because of its versatility, processability, low cost, and flexibility20. All these advantages make it an ideal raw material to achieve benefits such as maintaining soil temperature and moisture content and preventing weed growth21, 22, all of which ultimately contribute to enhanced agricultural production. However, the widespread use of non-biodegradable LDPE has resulted in serious environmental concerns22. Recent research has shown that the presence of LDPE MPs in the soil can alter microbial community characteristics and enzymatic activity23,24,25. Moreover, LDPE has been recognized as a substrate for distinct microbial colonization, which may modify the microbial community structure and hinder ecosystem functioning26, 27. These changes can alter the fertility of the soil28. Certain bacteria, such as Arcobacter and Colwellia spp., can colonize LDPE, resulting in the successional formation of plastisphere-specific bacterial assemblages29. Nevertheless, the quantity of MPs in the soil is an important factor in determining the soil's chemical properties and microbial activity. Judy et al.30 found no remarkable shifts in the soil microbial community and diversity with 1% (w:w) PE, polyvinyl chloride, or polyethylene terephthalate MPs compared to the control (without MPs). In contrast, 5% (w:w) polyvinyl chloride MP considerably changed the abundance of bacterial groups31. However, these findings vary among different studies. A few studies have focused on the effects of LDPE MPs across a wide range of concentration levels on the chemical properties and microbial communities in soil. Moreover, correlations among LDPE MP concentrations, soil chemical properties, and microbial communities have rarely been analyzed. Thus, knowledge of the relationships between these properties and their underlying mechanisms remains incomplete, impeding our capacity to address the issues associated with MP pollution in agroecosystems. We hypothesized that LDPE MPs may alter soil chemical properties and microbial community structure and that these changes could differ with varying concentrations and exposure time of LDPE MPs. Thus, the aim of this study was to explore the effect of LDPE MPs across a range of concentration levels on changes in (i) soil chemical properties; (ii) soil bacterial richness, diversity, and abundance; and (iii) correlations among soil chemical properties, bacterial communities, and LDPE MP concentrations using an incubation study. The results of this study enhance our understanding of the potential risks posed by LDPE MPs in agroecosystems. In addition, our findings will be useful for policymakers to develop policies and regulations to minimize plastic-associated environmental issues and to protect soil health.
Materials and methods
Soil collection and handling
The soils used for the incubation study were collected from an agricultural field in Busan (35°14ʹ24.5ʺN, 128°58ʹ44.4ʺE), South Korea. The region has a humid subtropical climate with a mean annual temperature of 15.5 °C and a mean annual precipitation of 98 mm. The field has been used to grow soybeans for several years. The soil samples were collected before soybean planting in May 2020. Considering the soil processes, nutrient cycling, microbial activity, and plant-root interactions occurring in the rooting zone, 30 soil samples were randomly collected from a depth of 0–40 cm (representing the rooting zone).
After removing the litter layer from the soil surface, subsamples were collected in a steel container, thoroughly mixed to obtain a composite sample, and then brought to the laboratory. They were spread on ink-free paper for air-drying, which was performed in a dust-free, well-ventilated room at 24 ± 1 °C. Thereafter, plant residues and other organic debris were carefully removed using forceps. The soil was ground and sieved using a 2 mm metallic sieve, homogenized by mixing in a steel container and stored in high-density polyethylene storage containers until chemical analyses and incubation experiments were conducted.
Preparation of LDPE MPs
The LDPE plastic mulch films, produced by IHLSHIN Chemical (Republic of Korea) were fragmented into pieces (16–2100 µm in size) through a cryomilling process. Briefly, the of LDPE mulch film pieces were embrittled with liquid nitrogen and crushed in an ultracentrifugal mill utilizing a 5 mm ring sieve (Freezer/Mill® Cryogenic grinder 6875). The resulting LDPE MPs were air-dried and stored in Pyrex bottles at 24 ± 1 °C until their use in subsequent experiments.
Experiment setup
Considering the accumulation of MPs in soil, six LDPE MP concentration levels were selected: 0, 0.1, 1, 3, 5, and 7% (w:w). According to previous research, these MP levels can be considered environmentally relevant under significant human activities, where the MP level can reach up to 7%. A MP addition of < 1% can be classified as a low concentration, while an addition > 1% can be considered a high concentration32, 33. The incubation experiment was conducted in an automatic incubator at the laboratory scale. The LDPE MPs were thoroughly mixed with 25 g of soil at the above concentrations and placed in enclosed 50 mL sterilized Falcon tubes (perforated lids were used to allow air exchange). The soil moisture content of each tube was maintained at 70% of the soil water-holding capacity by adding deionized water (based on the weight loss) throughout the experiment. The control samples were filled with soil only (i.e., 0% treatment without adding LDPE MPs). All treatments and control groups were quadruplicated and incubated in the dark at 25 °C for 100 d in an incubator (MIR-554, SANYO Electronic, Co., Ltd., Japan). Following the 100 d incubation period, soil samples were gathered and divided into two subsample groups for chemical and microbial analyses.
Soil physicochemical properties
The soil pH and electrical conductivity (EC) were determined by dissolving soil samples (collected before and after incubation) in deionized water in a ratio of 1:5 (solid:solution)34. Available phosphorus (P) content was measured by the ascorbic acid method35 using a UV–VIS spectrophotometer (Thermo Fisher Scientific, USA). Exchangeable cations, including Na+, K+, Mg2+, and Ca2+ were extracted using 1 M ammonium acetate (NH4CH3CO2, pH 7) and their concentrations were measured using inductively coupled plasma optical emission spectroscopy (ICP-OES, Optima 7300 DV, Perkin-Elmer, USA)36. The sum of Na+, K+, Mg2+, and Ca2+ is reported as the total exchangeable cation content. The percentages of sand, silt, and clay were determined using the hydrometer method37, and soil texture was determined according to the USDA textural triangle38. The physicochemical properties of the soil are available in Dissanayake et al.13.
Soil bacterial community composition
For microbial analysis, soil samples were collected twice: (i) on the first day of incubation (0 d) and (ii) at the end of incubation (100 d). Genomic DNA was extracted from the soil (0.5 g) using the FastDNA® spin kit (MP Biomedicals, USA), according to the manufacturer’s instructions39. The concentration and purity of the genomic DNA were measured using a NanoDrop 2000 spectrophotometer (Thermo Fisher Scientific, USA), and the soil DNA was pyrosequenced at Macrogen Inc. (Seoul, Republic of Korea). Briefly, the bacterial 16S gene in the extracted DNA was amplified using universal primers 341F and 805R (341F:5′-CCTACGGGNGGCWGCAG-3′ and 805R:5′-GACTACHVGGGTATCTAATCC-3′). Amplification was performed using the following protocol: initial denaturation at 95 °C for 3 min; 25 cycles of denaturation at 95 °C for 30 s, annealing at 55 °C for 30 s, and extension at 72 °C for 30 s; and final extension at 72 °C for 5 min. The products were normalized and pooled using PicoGreen, and the size of the libraries was verified using the TapeStation DNA Screentape D1000 (Agilent) and sequenced using the MiSeq™ platform (Illumina, San Diego, CA, USA). Based on operational taxonomic units, richness and diversity indices were calculated using MOTHUR40, and then statistically separated using the Statistical Analysis System ver. 9.4 (SAS, Cary, NC, USA).
Quality control and statistical analysis
For quality control and quality assurance (QA/QC) in our research, all glassware was properly cleaned, washed with diluted hydrochloric acid, and rinsed with deionized water before use. The laboratory equipment and work surface were thoroughly cleaned with 70% ethanol and wiped with paper wipes before performing the analysis. Cotton lab coats were worn to prevent MP contamination, and items made of plastic (e.g., plasticware, suits, and fabrics) were avoided during this study. All the analytical instruments were calibrated prior to chemical analysis. Analyses were performed using four experimental replicates, and the results are reported as the mean ± standard deviation. Blank samples and analytical-grade reagents were employed for all the analyses. The values of the blank samples were either low or below the detection limits of the corresponding method. The normal distribution of the data was tested using the PROC UNIVARIATE in SAS ver. 9.4 (Cary, NC, USA). To compare the two groups (0 d vs. 100 d), PROC GLM was performed using SAS ver. 9.4. The significance of differences between treatments was evaluated using one-way analysis of variance (ANOVA). The least significant difference (LSD) test verified significant differences between the various treatments at p < 0.05. Principal component analysis (PCA) was performed using SPSS 19.0, to correlate the LDPE MP concentrations with soil chemical properties and bacterial community data.
Results and discussion
Effects of LDPE MPs on soil chemical properties
The soil texture was silty loam, and the initial soil pH was moderately alkaline (8.25). The higher pH at the sampling sites may have been due to the long-term cultivation of soybeans. Liu et al.41 reported that soil pH and nutrient availability can be improved after long-term continuous soybean cropping. The pH of soils treated with LDPE MPs ranged from 8.22 to 8.42, with no significant difference among treatments (Fig. 1a), indicating that LDPE MPs (0.1–7%) did not affect the soil pH. This is consistent with the results of Qi et al.42, who reported that a short incubation period might not be sufficient for MPs to initiate chemical changes in the soil. The soil EC increased (p < 0.05) at higher LDPE MP concentrations (1–7%) (Fig. 1b). In general, if soil EC exceeds 2 dS m−1, soil salinity development, crop growth, and performance may be restricted43. However, none of the treatments increased soil EC causing soil salinity. The increasing EC values were probably due to enhanced microbial activity at higher LDPE MP levels. Soil microbial communities can enhance the mineralization of soil organic and inorganic compounds, thereby releasing inorganic nutrients that can increase the soil EC44. In contrast, Qi et al.42, demonstrated that the addition of LDPE plastic debris did not affect soil EC and productivity owing to the short incubation period (1 month).
The LDPE MP treatments increased the available P content in the soil, although no significant differences were found among the treatments (Fig. 1c). The highest value was observed for the 0.1% LDPE MP treatment, with a 50.8% increase compared with that of the control. This was probably due to the changes in soil nutrient content at some LDPE MP concentrations. For example, Liu et al.3 reported that MP incorporation into the soil can facilitate the release of soil nutrients such as carbon, nitrogen, and phosphorus into the soil solution. In contrast, the addition of 0.2% PE MPs did not alter the availability of nutrients in the soil, including phosphorus, indicating that environmentally relevant concentrations of MPs did not have an impact on soil nutrient supply45. In addition, no significant changes in inorganic P concentrations were observed in soils amended with MPs46. Generally, an increase in soil pH can facilitate the precipitation of P with Ca2+ (i.e., more crystalline Ca-P), which decreases the amount of soluble phosphate47. However, in this study, no significant difference was found in pH; thus, there was no reduction in available P.
Higher LDPE MP concentrations (3, 5, and 7%) resulted in relatively lower total exchangeable cation content than the control and lower LDPE MP concentrations (0.1 and 1%) (Fig. 1d). These results indicate that an increase in MP concentration could decrease essential plant nutrients such as Na+, K+, Mg2+, and Ca2+ in the soil. Overall, the concentrations of LDPE MP had no effect on pH and available P, whereas soil EC increased, and total soil exchangeable cation content decreased at higher LDPE MP concentrations.
Effects of LDPE MPs on soil bacterial richness and diversity
The Chao1 and Ace indices were used to estimate bacterial richness, and the Shannon and Invsimpson indices were used to evaluate the bacterial diversity of the samples48. The Chao1, Ace, Shannon, and Invsimpson indices were significantly increased after 100 d of incubation compared to the initial samples (0 d), except for a few cases (Fig. 2). The increase in soil bacterial richness and diversity after incubation was likely due to changes in soil microbial habitat over time. For instance, prolonged incubation with adequate moisture content (70% of water-holding capacity) in the soil might have increased soil bacterial growth and activity49. The availability of soil nutrients (e.g., available P) and carbon supplementation over time can promote microbial activity in the soil, thus enhancing their richness and diversity50. Moreover, LDPE can act as a factitious surface for microbial colonization51. Therefore, in the present study, different amounts of LDPE MPs incorporated into the soil were expected to improve microbial richness and diversity after 100 d of incubation.
At the end of the incubation period, different concentrations of LDPE MP did not significantly affect the Chao1 and Ace indices, except for the 0.1% LDPE MP treatment (Fig. 2 and Table S1). The addition of 0.1% MP significantly reduced the Chao1 and Ace indices compared with the control, indicating that certain MP amounts can negatively affect bacterial richness in the soil23, 52. Shannon and Simpson's indices were relatively lower at 5% and 7% LDPE MP concentrations compared with the control and other treatments. This implies that high concentrations of LDPE MPs can negatively affect some soil bacteria, thereby reducing their diversity in the soil. This may be due to variations in growth factors among different bacterial species53 and changes in microbial diversity induced by MPs15, 54. Moreover, the presence of high amounts of MPs can exert selection pressure on soil microbes, which can alter the microbial community structure and diversity, while exerting evolutionary consequences55. The alterations caused by MPs in soil ecosystems may also lead to the loss of microhabitats for indigenous microorganisms56.
Effects of LDPE MPs on soil bacterial community structure
Eleven phyla (Acidobacteria, Actinobacteria, Bacteroidetes, Candidatus Saccharibacteria, Chloroflexi, Cyanobacteria, Firmicutes, Gemmatimonadetes, Planctomycetes, Proteobacteria, and Verrucomicrobia) as well as a few unspecified communities were identified (Fig. 3 and Table S2). Such bacterial communities were present in both soils (before and after incubation), with changes in their relative abundances (%) depending on the LDPE MP concentration and incubation period. Before incubation (0 d), Proteobacteria (31.4–40.2%) displayed the highest relative abundance and was considered one of the dominant bacterial phyla, followed by Bacteroidetes (11.5–20.6%), Actinobacteria (9.94–20.0%), and Firmicutes (9.11–15.7%) in the control and all LDPE-MP-treated soils. These phyla constitute the dominant strains found globally in soil57. The phylum Proteobacteria has substantially high metabolic, physiological, and morphological diversity and can survive under various environmental conditions58,59,60. Proteobacteria are typically observed in soil libraries61. Proteobacteria and Actinobacteria are also the most abundant in soils worldwide62, and can survive under various extreme environmental conditions, such as cold stress, drought, and heavy metal contamination63, 64. Proteobacteria, Acidobacteria, and Actinobacteria are the most common and abundant bacterial phyla in a wide range of forest soils61.
After incubation for 100 d, Proteobacteria (25.8–33.0%) displayed the highest relative abundance among the control and all LDPE MP-treated soils. Proteobacteria preferably colonize low bulk density and nutrient-rich soils with high carbon availability65. However, the abundance of Proteobacteria decreased in soils treated with higher concentrations of LDPE MPs. Actinobacteria (7.5–31.8%), Acidobacteria (9.8–17.2%), Chloroflexi (6.5–10.0%), and Bacteroidetes (4.3–10.7%) were the most abundant phyla in all treatments. However, Acidobacteria, Bacteroidetes, Chloroflexi, Proteobacteria, and Verrucomicrobia showed greater relative abundances at lower LDPE MP concentrations (< 1%), whereas Firmicutes and Gemmatimonadetes were more abundant at < 3% LDPE MP concentrations. Acidobacteria can survive in MP-contaminated soils subjected to intensive plastic mulching for more than 30 years26. Acidobacteria, Bacteroidetes, Gemmatimondadetes, Proteobacteria, and Nitrospirae were considerably increased in soils amended with MPs23. Moreover, Firmicutes, Proteobacteria, and Actinobacteria grew in the LDPE MP-contaminated soils. For instance, MPs and As-contaminated soils showed the highest abundance of Proteobacteria66. Additionally, PE MP-treated soils showed the highest abundance of Proteobacteria, followed by Firmicutes and Actinobacteria67. Moreover, Actinobacteria and Proteobacteria can reportedly degrade plastic mulch films in agricultural lands and are therefore termed plastic-associated bacteria26. Interestingly, the relative abundance of Actinobacteria increased as the concentration of the LDPE MPs increased from 0 to 7%. Candidatus Saccharibacteria showed the highest relative abundance (3.9–4.5%) within the 3–5% LDPE MP concentration, whereas Cyanobacteria exhibited the greatest abundance (0.94%) at the 7% LDPE MP concentration. These results imply that different concentrations of LDPE MPs distinctly affect the bacterial species in the soil. Actinobacteria can degrade LDPE, which generates long-chain alkanes as byproducts of bacterial LDPE decay68. Several studies have shown that Streptomyces (e.g., Streptomyces fulvissimus), which is the largest genus of Actinobacteria, can degrade PE in soil68. Thus, the increase in substrate-specific bacteria on LDPE MPs shows that LDPE MPs can act as substances for the proliferation of potential plastic-degrading bacteria in the soil. Further studies are essential to explore these reasons, gather additional evidence for the differences in bacterial phyla, and identify the ability of MP-associated bacteria to degrade LDPE MPs.
A heat map of the bacterial community in terms of phyla in the agricultural soil before incubation (0 d) and after incubation (100 d) according to the LDPE MP concentration is shown in Fig. 4. Overall, the relative abundance of the bacterial community after 100 d of incubation was higher than that before incubation (0 d). Aminicenantes, Firmicutes, and Bacteroidetes showed the highest relative abundance before incubation (0 d); however, the relative abundances of these phyla tended to decrease after incubation (100 d). Elusimicrobia, Latescibacteria, Microgenomates, Pacearchaeota, Fibrobacteres, Chloroflexi, and Hydrogenedentes showed the highest relative abundances at concentrations of 0%, 0.1%, and 1%, after 100 d of incubation. Actinobacteria and Candidatus Saccharibacteria had the highest relative abundances at concentrations of 3, 5, and 7% after incubation for 100 d. These results showed that the prolonged incubation period and the addition of LDPE MP altered the bacterial community structure in the soil. The effects of MPs on soil strongly depend on the exposure time69. Similarly, Wang et al.25 found that the addition of MP significantly shifted the soil bacterial community structure, and community structure differences increased over the incubation period.
After 100 d of incubation, the relative abundances of Actinobacteria and Candidatus Saccharibacteria tended to increase. In contrast, the relative abundances of Acidobacteria, Microgenomates, Pacearchaeota, Chloroflexi, Hydrogenedentes, and Euryarchaeota tended to decrease with increasing LDPE MP concentrations (Fig. 4). These results reveal that LDPE MP addition stimulated soil microbial abundance, and specific bacterial phyla were present in higher relative abundances across different treatments, indicating that LDPE MPs akin to anthropogenic activity can impose selective pressure on distinct microbial taxa. The effects of MPs on the soil mainly depend on their quantity3. MPs can distinctly affect soil properties and exert certain selection pressures on soil microorganisms, thereby altering the community structure and diversity12. An increase in the quantity of LDPE MPs in the soil disrupts soil structure, alters porosity, and impairs aeration and water retention70. Moreover, increased LDPE MP concentration can affect microbial species, altering soil physical properties, such as soil structure and porosity15, 71. Increased soil porosity may enhance airflow in the soil, thereby promoting the abundance of aerobic microorganisms72. In contrast, MP exposure substantially decreases the relative abundance of Acidobacteria in fertilized red soil45, which could negatively affect soil ecosystems because Acidobacteria plays a key role in soil ecological function73, 74. Furthermore, in the 1% LDPE MP treatment, the relative abundance of Diapherotrites after the incubation period was noticeably higher than that of the other phyla (Fig. 4). Their abundance decreased with increasing LDPE MP concentration from 1 to 7%. This implies that 1% LDPE MP is the ideal quantity for the growth and proliferation of some bacterial species belonging to the Diapherotrites. This could be attributed to the formation of a suitable microhabitat for some bacteria at the MP level26. Notably, Ignavibacteriae, Acidobacteria, Crenarchaeota, Verrucomicrobia, and Euryarchaeota were more abundant at 0% and 0.1% LDPE MP; however, their abundance decreased with increasing LDPE MP concentrations (Fig. 4), suggesting their low tolerance to high amounts of LDPE MP. Overall, the bacterial heat map demonstrated that the addition of LDPE MPs to the soil tended to increase the bacterial community structure over time, but the abundance of many phyla decreased with increasing LDEP MP concentration. In general, the influence of different quantities of LDPE MP on the soil bacterial communities remains unclear. Thus, further studies are required to elucidate the relationship between MP and microorganisms, which may be highly related to soil properties and MP type, shape, and quantity.
The relationship of LDPE MP concentration and soil chemical properties with bacterial communities
PCA was employed to visualize the correlations between the bacterial community structure and chemical properties of soil with different concentrations of LDPE MPs (Fig. 5). The length and direction of the arrow represent the degree of influence of LDPE MP concentrations on soil chemical and microbial properties and the positive and negative correlations between the two. Components 1 and 2 explained 61.9 and 21.6% of the variance, respectively, accounting for 83.5% of the total variance of the 29 variables. Soil properties, including pH and total exchangeable cations (Na+, K+, Mg2+, and Ca2+), were positively correlated with 0% and lower LDPE MP levels (0.1% and 1%) and negatively correlated with higher LDPE MP concentrations (5% and 7%) (Fig. 5). Bacterial richness and diversity indices were positively correlated with the 0% and 1% LDPE MP treatments. These results confirmed that the presence of LDPE MPs in the soil at relatively low quantities (0.1% and 1%) did not have an impact on chemical properties, bacterial richness, and diversity; however, increasing LDPE MPs could alter soil properties and microbial activity. Higher LDPE MP concentrations (3%, 5%, and 7%) were positively correlated with soil EC, indicating that relatively higher MP amounts could increase soil EC.
Acidobacteria, Bacteroidetes, Chloroflexi, Firmicutes, Gemmatimonadetes, Proteobacteria, and Verrucomicrobia were positively correlated with LDPE MP concentrations of 0%, 0.1%, and 1%. Furthermore, these phyla were negatively correlated with LDPE MP concentrations of 5% and 7%. These findings demonstrate that bacterial species belonging to the aforementioned phyla are vulnerable to higher quantities of LDPE MPs. Thus, soil contamination with high amounts of plastics can threaten bacterial abundance and activity in the soil. In contrast, Actinobacteria, Candidatus Saccharibacteria, and Cyanobacteria showed strong positive correlations with the LDPE MP concentrations of 5% and 7%. This implies that bacteria belonging to the aforementioned phyla can grow well under high LDPE MP pollution owing to their LDPE MP tolerance. Similarly, Ren et al.75 reported a reduced abundance of Acidobacteria, Bacteroidetes, Gemmatimonadetes, and Proteobacteria and an increased abundance of Actinobacteria in MP-contaminated soil. Acidobacteria, Bacteroidetes, Chloroflexi, Firmicutes, Gemmatimonadetes, Proteobacteria, and Verrucomicrobia were positively correlated with soil pH and exchangeable cation content (Na+, K+, Mg2+, and Ca2+). Actinobacteria, Candidatus Saccharibacteria, and Cyanobacteria were positively correlated with the soil EC. These findings further confirmed that changes in soil chemical properties caused by LDPE MPs lead to a greater abundance of bacterial phyla. Changes induced by MPs in the soil may exert a favorable or unfavorable impact on certain soil microorganisms, thereby affecting the soil microbial community structure76. Our results showed that LDPE MP addition promoted the growth of tolerant bacteria but impeded that of sensitive bacteria in the soil.
Conclusion
In summary, the addition of LDPE MPs to soil increased the soil EC at LDPE MP concentrations ranging from 1 to 7%. The total exchangeable cation content decreased at higher LDPE MP concentrations (3–7%), whereas soil pH was not significantly affected by LDPE MP addition. Incubation time increased the overall soil microbial properties in terms of richness, diversity, and relative abundance of the bacterial community. However, at the end of the incubation period, the Chao1 and Ace indices decreased with the addition of 0.1% LDPE MP. Shannon and Invsimpson indices were relatively higher at 0% and 1% LDPE MP addition when compared with those of the other treatments. The relative abundance of Proteobacteria, Actinobacteria, and Acidobacteria was higher in all treatments. The abundance of Actinobacteria increased with an increase in the LDPE MP concentrations and showed a positive correlation with higher LDPE MP concentrations (5% and 7%). Moreover, PCA showed that the presence of LDPE MPs in relatively low quantities in the soil did not affect the chemical properties and bacterial richness, diversity, and abundance. However, increasing the quantity of LDPE MPs may affect soil properties and microbial properties. These results provide new insights into the impact of LDPE MPs on agricultural soil and highlight the important role of LDPE in the soil. Further research is required to determine the impact of various types of MPs on microorganisms, macro-organisms, and higher plants in various agroecosystems. Moreover, field experiments must be conducted in various crop systems under different climatic conditions involving diverse soil types, which will be advantageous for evaluating the ecological impact of plastic mulch pollution on agricultural soils, ecosystems, and ecosystem functions.
Data availability
The data available upon a reasonable request to the corresponding author.
References
Statista. Annual Production of Plastics Worldwide from 1950 to 2020. https://www.statista.com/statistics/282732/global-production-of-plastics-since-1950/. (Accessed January 2020).
Huang, Y., Liu, Q., Jia, W. Q., Yan, C. R. & Wang, J. Agricultural plastic mulching as a source of microplastics in the terrestrial environment. Environ. Pollut. 260, 114096. https://doi.org/10.1016/j.envpol.2020.114096 (2020).
Liu, H. et al. Response of soil dissolved organic matter to microplastic addition in Chinese loess soil. Chemosphere 185, 907–917. https://doi.org/10.1016/j.chemosphere.2017.07.064 (2017).
Liu, E. K., He, W. Q. & Yan, C. R. “White revolution” to ’white pollution’-agricultural plastic film mulch in China. Environ. Res. Lett. 9, 1–3. https://doi.org/10.1088/1748-9326/9/9/091001 (2014).
Geyer, R., Jambeck, J. R. & Law, K. L. Production, use, and fate of all plastics ever made. Sci. Adv. 3, e1700782. https://doi.org/10.1126/sciadv.1700782 (2017).
Ng, E. L. et al. An overview of microplastic and nanoplastic pollution in agroecosystems. Sci. Total Environ. 627, 1377–1388. https://doi.org/10.1016/j.scitotenv.2018.01.341 (2018).
Horton, A. A., Walton, A., Spurgeon, D. J., Lahive, E. & Svendsen, C. Microplastics in freshwater and terrestrial environments: Evaluating the current understanding to identify the knowledge gaps and future research priorities. Sci. Total Environ. 586, 127–141. https://doi.org/10.1016/j.scitotenv.2017.01.190 (2017).
van den Berg, P., Huerta-Lwanga, E., Corradini, F. & Geissen, V. Sewage sludge application as a vehicle for microplastics in eastern Spanish agricultural soils. Environ. Pollut. 261, 114198 (2020).
Nizzetto, L., Futter, M. & Langaas, S. Are agricultural soils dumps for microplastics of urban origin?. Environ. Sci. Technol. 50, 10777–10779. https://doi.org/10.1021/acs.est.6b04140 (2016).
Mitrano, D. M., Wick, P. & Nowack, B. Placing nanoplastics in the context of global plastic pollution. Nat. Nanotechnol. 16, 491–500 (2021).
Palansooriya, K. N. et al. Particulate Plastics in Terrestrial and Aquatic Environments 107–124 (CRC Press, 2020).
Rillig, M. C., Machado, A. A. D., Lehmann, A. & Klumper, U. Evolutionary implications of microplastics for soil biota. Environ. Chem. 16, 3–7. https://doi.org/10.1071/En18118 (2019).
Dissanayake, P. D. et al. Combined effect of biochar and soil moisture on soil chemical properties and microbial community composition in microplastic-contaminated agricultural soil. Soil Use Manag. https://doi.org/10.1111/sum.12804 (2022).
Qi, R. M., Jones, D. L., Li, Z., Liu, Q. & Yan, C. R. Behavior of microplastics and plastic film residues in the soil environment: A critical review. Sci. Total Environ. 703, 134722. https://doi.org/10.1016/j.scitotenv.2019.134722 (2020).
Rillig, M. C. Microplastic in terrestrial ecosystems and the soil?. Environ. Sci. Technol. 46, 6453–6454. https://doi.org/10.1021/es302011r (2012).
Machado, A. A. D., Kloas, W., Zarfl, C., Hempel, S. & Rillig, M. C. Microplastics as an emerging threat to terrestrial ecosystems. Glob. Change Biol. 24, 1405–1416. https://doi.org/10.1111/gcb.14020 (2018).
Helmberger, M. S., Tiemann, L. K. & Grieshop, M. J. Towards an ecology of soil microplastics. Funct. Ecol. 34, 550–560. https://doi.org/10.1111/1365-2435.13495 (2020).
Kasirajan, S. & Ngouajio, M. Polyethylene and biodegradable mulches for agricultural applications: A review. Agron. Sustain. Dev. 32, 501–529. https://doi.org/10.1007/s13593-011-0068-3 (2012).
Espi, E., Salmeron, A., Fontecha, A., Garcia, Y. & Real, A. I. Plastic films for agricultural applications. J. Plast. Film Sheeting 22, 85–102. https://doi.org/10.1177/8756087906064220 (2006).
Horodytska, O., Valdés, F. J. & Fullana, A. Plastic flexible films waste management–A state of art review. Waste Manag. 77, 413–425 (2018).
Astner, A. F. et al. Mechanical formation of micro- and nano-plastic materials for environmental studies in agricultural ecosystems. Sci. Total Environ. 685, 1097–1106. https://doi.org/10.1016/j.scitotenv.2019.06.241 (2019).
Steinmetz, Z. et al. Plastic mulching in agriculture. Trading short-term agronomic benefits for long-term soil degradation?. Sci. Total Environ. 550, 690–705. https://doi.org/10.1016/j.scitotenv.2016.01.153 (2016).
Huang, Y. et al. LDPE microplastic films alter microbial community composition and enzymatic activities in soil. Environ. Pollut. 254, 112983. https://doi.org/10.1016/j.envpol.2019.112983 (2019).
Rong, L. et al. LDPE microplastics affect soil microbial communities and nitrogen cycling. Sci. Total Environ. 773, 145640 (2021).
Wang, J. et al. LDPE microplastics significantly alter the temporal turnover of soil microbial communities. Sci. Total Environ. 726, 138682. https://doi.org/10.1016/j.scitotenv.2020.138682 (2020).
Zhang, M. et al. Microplastics from mulching film is a distinct habitat for bacteria in farmland soil. Sci. Total Environ. 688, 470–478. https://doi.org/10.1016/j.scitotenv.2019.06.108 (2019).
McCormick, A., Hoellein, T. J., Mason, S. A., Schluep, J. & Kelly, J. J. Microplastic is an abundant and distinct microbial habitat in an urban river. Environ. Sci. Technol. 48, 11863–11871. https://doi.org/10.1021/es503610r (2014).
Xu, B. L. et al. Microplastics in the soil environment: Occurrence, risks, interactions and fate—A review. Crit. Rev. Environ. Sci. Technol. 50, 2175–2222. https://doi.org/10.1080/10643389.2019.1694822 (2020).
Harrison, J. P., Schratzberger, M., Sapp, M. & Osborn, A. M. Rapid bacterial colonization of low-density polyethylene microplastics in coastal sediment microcosms. BMC Microbiol. 14, 1–15. https://doi.org/10.1186/s12866-014-0232-4 (2014).
Judy, J. D. et al. Microplastics in municipal mixed-waste organic outputs induce minimal short to long-term toxicity in key terrestrial biota. Environ. Pollut. 252, 522–531. https://doi.org/10.1016/j.envpol.2019.05.027 (2019).
Fei, Y. F. et al. Response of soil enzyme activities and bacterial communities to the accumulation of microplastics in an acid cropped soil. Sci. Total Environ. 707, 135634. https://doi.org/10.1016/j.scitotenv.2019.135634 (2020).
Wang, J., Li, J., Wang, Q. & Sun, Y. Microplastics as a vector for HOC bioaccumulation in earthworm Eisenia fetida in soil: Importance of chemical diffusion and particle size. Environ. Sci. Technol. 54, 12154–12163 (2020).
Fuller, S. & Gautam, A. A procedure for measuring microplastics using pressurized fluid extraction. Environ. Sci. Technol. 50, 5774–5780 (2016).
Igalavithana, A. D. et al. Heavy metal immobilization and microbial community abundance by vegetable waste and pine cone biochar of agricultural soils. Chemosphere 174, 593–603 (2017).
USEPA, E. method 310.1: Ortho-phosphorus, dissolved automated, ascorbic acid. Environmental Sciences Section Inorganic Chemistry Unit, Wisconsin State Lab of Hygiene (1992).
Rajapaksha, A. U. et al. Invasive plant-derived biochar inhibits sulfamethazine uptake by lettuce in soil. Chemosphere 111, 500–504 (2014).
Klute, A. Methods of Soil Analysis Part 1: Physical and Mineralogical Methods 2nd edn. (American Society of Agronomy, 1986).
USDA. United States Department of Agriculture. Soil Texture Calculator. https://www.nrcs.usda.gov/wps/portal/nrcs/detail/soils/survey/?cid=nrcs142p2_054167 (2022).
MP Biomedicals. Instruction Manual, FastDNATM SPIN Kit for Soil. https://www.livning.com/uploads/manual/2021/b0/850e58074019785db486807862eb58c76bb8c3.pdf. (2021).
Schloss, P. D. et al. Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75, 7537–7541 (2009).
Liu, Z. et al. Long-term continuous cropping of soybean is comparable to crop rotation in mediating microbial abundance, diversity and community composition. Soil Tillage Res. 197, 104503 (2020).
Qi, Y. L. et al. Impact of plastic mulch film debris on soil physicochemical and hydrological properties. Environ. Pollut. 266, 115097. https://doi.org/10.1016/j.envpol.2020.115097 (2020).
Abrol, I., Yadav, J. S. P. & Massoud, F. Salt-Affected Soils and Their Management (Food & Agriculture Org., 1988).
Sartore, L. et al. Effect of hydrolyzed protein-based mulching coatings on the soil properties and productivity in a tunnel greenhouse crop system. Sci. Total Environ. 645, 1221–1229. https://doi.org/10.1016/j.scitotenv.2018.07.259 (2018).
Li, H. Z. et al. Long-term fertilization history alters effects of microplastics on soil properties, microbial communities, and functions in diverse farmland ecosystem. Environ. Sci. Technol. 55, 4658–4668. https://doi.org/10.1021/acs.est.0c04849 (2021).
Chen, H. P., Wang, Y. H., Sun, X., Peng, Y. K. & Xiao, L. Mixing effect of polylactic acid microplastic and straw residue on soil property and ecological function. Chemosphere 243, 125271. https://doi.org/10.1016/j.chemosphere.2019.125271 (2020).
Yan, Z. J., Chen, S., Dari, B., Sihi, D. & Chen, Q. Phosphorus transformation response to soil properties changes induced by manure application in a calcareous soil. Geoderma 322, 163–171. https://doi.org/10.1016/j.geoderma.2018.02.035 (2018).
Palansooriya, K. N. et al. Biochar alters chemical and microbial properties of microplastic-contaminated soil. Environ. Res. 209, 112807 (2022).
de Nijs, E. A., Hicks, L. C., Leizeaga, A., Tietema, A. & Rousk, J. Soil microbial moisture dependences and responses to drying–rewetting: The legacy of 18 years drought. Glob. Change Biol. 25, 1005–1015 (2019).
Wang, Q. et al. Effects of nitrogen and phosphorus inputs on soil bacterial abundance, diversity, and community composition in Chinese fir plantations. Front. Microbiol. 9, 1543 (2018).
Rummel, C. D., Jahnke, A., Gorokhova, E., Kuhnel, D. & Schmitt-Jansen, M. Impacts of biofilm formation on the fate and potential effects of microplastic in the aquatic environment. Environ. Sci. Technol. Lett. 4, 258–267. https://doi.org/10.1021/acs.estlett.7b00164 (2017).
Yu, H., Zhang, Y. & Tan, W. The, “neighbor avoidance effect” of microplastics on bacterial and fungal diversity and communities in different soil horizons. Environ. Sci. Ecotechnol. 8, 100121. https://doi.org/10.1016/j.ese.2021.100121 (2021).
Blagodatskaya, E. & Kuzyakov, Y. Active microorganisms in soil: Critical review of estimation criteria and approaches. Soil Biol. Biochem. 67, 192–211. https://doi.org/10.1016/j.soilbio.2013.08.024 (2013).
He, P. J., Chen, L. Y., Shao, L. M., Zhang, H. & Lu, F. Municipal solid waste (MSW) landfill: A source of microplastics?-Evidence of microplastics in landfill leachate. Water Res. 159, 38–45. https://doi.org/10.1016/j.watres.2019.04.060 (2019).
Paramdeep, K., Singh, K. & Singh, B. Microplastics in soil: Impacts and microbial diversity and degradation. Pedosphere 32, 49–60 (2022).
Guo, J.-J. et al. Source, migration and toxicology of microplastics in soil. Environ. Int. 137, 105263 (2020).
Delgado-Baquerizo, M. et al. A global atlas of the dominant bacteria found in soil. Science 359, 320–325. https://doi.org/10.1126/science.aap9516 (2018).
Kersters, K. et al. Introduction to the proteobacteria. In The Prokaryotes 3rd edn, Vol. 5 (eds Dwarkin, M. et al.) 3–37 (Springer, 2006). https://doi.org/10.1053/j.tcam.2011.09.002.
Spain, A. M., Krumholz, L. R. & Elshahed, M. S. Abundance, composition, diversity and novelty of soil Proteobacteria. ISME J. 3, 992–1000. https://doi.org/10.1038/ismej.2009.43 (2009).
Rampelotto, P. H., Ferreira, A. D., Barboza, A. D. M. & Roesch, L. F. W. Changes in diversity, abundance, and structure of soil bacterial communities in brazilian savanna under different land use systems. Microb. Ecol. 66, 593–607. https://doi.org/10.1007/s00248-013-0235-y (2013).
Janssen, P. H. Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes. Appl. Environ. Microbiol. 72, 1719–1728. https://doi.org/10.1128/Aem.72.3.1719-1728.2006 (2006).
Faoro, H. et al. Influence of soil characteristics on the diversity of bacteria in the southern Brazilian Atlantic Forest. Appl. Environ. Microbiol. 76, 4744–4749. https://doi.org/10.1128/Aem.03025-09 (2010).
Singh, K. N. & Narzary, D. Heavy metal tolerance of bacterial isolates associated with overburden strata of an opencast coal mine of Assam (India). Environ. Sci. Pollut. Res. 28, 63111–63126 (2021).
Gaete, A., Mandakovic, D. & González, M. Isolation and identification of soil bacteria from extreme environments of Chile and their plant beneficial characteristics. Microorganisms 8, 1213 (2020).
Eilers, K. G., Lauber, C. L., Knight, R. & Fierer, N. Shifts in bacterial community structure associated with inputs of low molecular weight carbon compounds to soil. Soil Biol. Biochem. 42, 896–903. https://doi.org/10.1016/j.soilbio.2010.02.003 (2010).
Zhu, D., Li, G., Wang, H. T. & Duan, G. L. Effects of nano- or microplastic exposure combined with arsenic on soil bacterial, fungal, and protistan communities. Chemosphere 281, 130998. https://doi.org/10.1016/j.chemosphere.2021.130998 (2021).
Yu, H. W. et al. Microplastic residues in wetland ecosystems: Do they truly threaten the plant-microbe-soil system?. Environ. Int. 156, 106708. https://doi.org/10.1016/j.envint.2021.106708 (2021).
Lwanga, E. H. et al. Decay of low-density polyethylene by bacteria extracted from earthworm’s guts: A potential for soil restoration. Sci. Total Environ. 624, 753–757. https://doi.org/10.1016/j.scitotenv.2017.12.144 (2018).
Machado, A. A. D. et al. Impacts of microplastics on the soil biophysical environment. Environ. Sci. Technol. 52, 9656–9665. https://doi.org/10.1021/acs.est.8b02212 (2018).
Wang, F., Wang, Q., Adams, C. A., Sun, Y. & Zhang, S. Effects of microplastics on soil properties: Current knowledge and future perspectives. J. Hazard. Mater. 424, 127531. https://doi.org/10.1016/j.jhazmat.2021.127531 (2022).
Zhang, F., Li, M., Qi, J. H., Li, F. M. & Sun, G. J. Plastic film mulching increases soil respiration in ridge-furrow maize management. Arid Land Res. Manag. 29, 432–453. https://doi.org/10.1080/15324982.2015.1018456 (2015).
Tran, H.-T. et al. Aerobic composting remediation of petroleum hydrocarbon-contaminated soil. Current and future perspectives. Sci. Total Environ. 753, 142250 (2021).
Kalam, S. et al. Recent understanding of soil acidobacteria and their ecological significance: A critical review. Front. Microbiol. 11, 1–15. https://doi.org/10.3389/fmicb.2020.580024 (2020).
Xue, Y. F. et al. The persistence of bacterial diversity and ecosystem multifunctionality along a disturbance intensity gradient in karst soil. Sci. Total Environ. 748, 142381. https://doi.org/10.1016/j.scitotenv.2020.142381 (2020).
Ren, X., Tang, J., Liu, X. & Liu, Q. Effects of microplastics on greenhouse gas emissions and the microbial community in fertilized soil. Environ. Pollut. 256, 113347. https://doi.org/10.1016/j.envpol.2019.113347 (2020).
Li, C. et al. Effect of LDPE and biodegradable PBAT primary microplastics on bacterial community after four months of soil incubation. J. Hazard. Mater. 429, 128353 (2022).
Acknowledgements
This work was carried out with the support of the Cooperative Research Program for Agriculture Science and Technology Development (Project No. PJ01475801) from Rural Development Administration of the Republic of Korea. This work was also supported by the National Research Foundation of Korea (NRF) grant funded by the Korea government (MSIT) (No. 2021R1A2C2011734). This research was supported by Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education (NRF-2021R1A6A1A10045235). This work was also supported by the National Research Foundation of Korea(NRF) grant funded by the Korea government (MSIT) (NRF-2022M3J4A1091450) and the OJEong Resilience Institute, Korea University.The authors would also like to thank Soobin Kim from Korea University for his assistance with the soil analysis and laboratory work. We would like to thank Editage (www.Editage.co.kr) for English language editing.
Author information
Authors and Affiliations
Contributions
K.N.P. and M.K.S. carried out experiments, performed chemometric calculations, and wrote the original manuscript; A.E.N., L.S., S.X.C., J.S., and W.Z. reviewed and edited the manuscript; Y.S.O. conceptualized, supervised the funding of this work, reviewed, and edited the manuscript. All authors reviewed the manuscript and contributed to the final version.
Corresponding authors
Ethics declarations
Competing interests
The authors declare no competing interests.
Additional information
Publisher's note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary Information
Rights and permissions
Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
About this article
Cite this article
Palansooriya, K.N., Sang, M.K., El-Naggar, A. et al. Low-density polyethylene microplastics alter chemical properties and microbial communities in agricultural soil. Sci Rep 13, 16276 (2023). https://doi.org/10.1038/s41598-023-42285-w
Received:
Accepted:
Published:
DOI: https://doi.org/10.1038/s41598-023-42285-w
- Springer Nature Limited
This article is cited by
-
Phenanthrene Degradation by Sphingobium sp. PM1B in Soil Containing Polyethylene Microplastics: Effects and Mechanisms
Water, Air, & Soil Pollution (2024)