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Fig. 2 | BMC Genomics

Fig. 2

From: plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style

Fig. 2

Use plotnineSeqSuite to draw various graphs. A) draw a sequence logo based on the ‘chemistry’ color scheme, B) draw a sequence logo based on the ‘chemistry2’ color scheme, C) draw a sequence logo based on the ‘hydrophobicity’ color scheme, D) draw a sequence logo based on the ‘nucleotide’ color scheme, E) draw a sequence logo based on the ‘nucleotide2’ color scheme, F) draw a sequence logo based on the ‘base_pairing’ color scheme, G) draw a sequence logo based on the ‘clustalx’ color scheme, H) draw a sequence logo based on the ‘taylor’ color scheme, I) custom discrete color scheme, J) custom continuous color scheme, K) use lowercase English letters to draw a sequence logo, L) use numeric characters to draw a sequence logo, M) use special symbols to draw a sequence logo, N) draw a custom height logo, O)draw a sequence alignment diagram in no letter mode, P) draw a sequence histogram in no letter mode, Q) draw a sequence alignment diagram in which color schemes are applied to characters, R) drawn all layers in the same coordinate system, S) use with other functions of plotnine

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