Table 2 Number of genera identified per workflow and number of PCR cycles. No minimal thresholds were set
16S Databases | Silva | RefSeq | |||
|---|---|---|---|---|---|
Workflows | Kraken2 | EPI2ME | BugSeq | ||
16S | WIMP | ||||
PCR cycles | 15 | 71 | 197 | 252 | 8 |
20 | 74 | 206 | 265 | 8 | |
25 | 89 | 211 | 291 | 8 | |
30 | 76 | 214 | 286 | 8 | |
35 | 84 | 209 | 261 | 9 | |