Table 2 Genotype and allele frequencies of the BRCA2 rs9534275 SNP in cases and controls
Genotype or allele | Control [n (%)] | CAD [n (%)] | IS [n (%)] | CAD | IS | ||
|---|---|---|---|---|---|---|---|
OR (95% CI) | P | OR (95% CI) | P | ||||
TT | 203 (31.4) | 150 (24.8) | 140 (24.6) | 1 | 1 | ||
GT | 310(47.9) | 316 (52.1) | 291 (51.1) | 1.58 (1.19–2.08) | 0.365 | 1.52 (1.15–2.01) | 0.214 |
GG | 134 (20.7) | 140 (23.1) | 138 (24.3) | 1.78 (0.82–1.91) | 0.005 | 1.85 (1.32–2.59) | 0.003 |
X 2 | 6.812 | 7.257 | |||||
P | 0.033 | 0.027 | |||||
HWE (P) | 0.349 | 0.33 | 0.62 | ||||
TT | 203 (31.4) | 150 (24.8) | 140 (24.6) | 1 | 1 | ||
GT/GG | 444 (68.6) | 456 (75.2) | 429 (75.4) | 1.63 (1.25–2.12) | 0.004 | 1.61 (1.24–2.10) | 0.005 |
X 2 | 6.783 | 6.854 | |||||
P | 0.01 | 0.009 | |||||
T | 716 (55.3) | 616 (50.8) | 571 (50.2) | 1 | 1 | ||
G | 578 (44.7) | 596 (49.2) | 567 (49.8) | 1.35(1.14–1.60) | 0.005 | 1.37 (1.16–1.62) | 0.002 |
X 2 | 5.106 | 6.462 | |||||
P | 0.025 | 0.012 | |||||