Abstract
Freshwater Dothideomycetes are a highly diverse group of fungi, which are mostly saprobic in freshwater habitats worldwide. They are important decomposers of submerged woody debris and leaves in water. In this paper, we outline the genera of freshwater Dothideomycetes with notes and keys to species. Based on multigene analyses and morphology, we introduce nine new genera, viz. Aquimassariosphaeria, Aquatospora, Aquihelicascus, Fusiformiseptata, Neohelicascus, Neojahnula, Pseudojahnula, Purpureofaciens, Submersispora; 33 new species, viz. Acrocalymma bipolare, Aquimassariosphaeria kunmingensis, Aquatospora cylindrica, Aquihelicascus songkhlaensis, A. yunnanensis, Ascagilis submersa, A. thailandensis, Bambusicola aquatica, Caryospora submersa, Dictyocheirospora thailandica, Fusiformiseptata crocea, Helicosporium thailandense, Hongkongmyces aquaticus, Lentistoma aquaticum, Lentithecium kunmingense, Lindgomyces aquaticus, Longipedicellata aquatica, Neohelicascus submersus, Neohelicomyces dehongensis, N. thailandicus, Neohelicosporium submersum, Nigrograna aquatica, Occultibambusa kunmingensis, Parabambusicola aquatica, Pseudoasteromassaria aquatica, Pseudoastrosphaeriella aquatica, Pseudoxylomyces aquaticus, Purpureofaciens aquatica, Roussoella aquatica, Shrungabeeja aquatica, Submersispora variabilis, Tetraploa puzheheiensis, T. yunnanensis; 16 new combinations, viz. Aquimassariosphaeria typhicola, Aquihelicascus thalassioideus, Ascagilis guttulaspora, A. queenslandica, A. seychellensis, A. sunyatsenii, Ernakulamia xishuangbannaensis, Neohelicascus aquaticus, N. chiangraiensis, N. egyptiacus, N. elaterascus, N. gallicus, N. unilocularis, N. uniseptatus, Neojahnula australiensis, Pseudojahnula potamophila; 17 new geographical and habitat records, viz. Aliquandostipite khaoyaiensis, Aquastroma magniostiolata, Caryospora aquatica, C. quercus, Dendryphiella vinosa, Ernakulamia cochinensis, Fissuroma neoaggregatum, Helicotruncatum palmigenum, Jahnula rostrata, Neoroussoella bambusae, N. leucaenae, Occultibambusa pustula, Paramonodictys solitarius, Pleopunctum pseudoellipsoideum, Pseudocapulatispora longiappendiculata, Seriascoma didymosporum, Shrungabeeja vadirajensis and ten new collections from China and Thailand, viz. Amniculicola guttulata, Aquaphila albicans, Berkleasmium latisporum, Clohesyomyces aquaticus, Dictyocheirospora rotunda, Flabellascoma fusiforme, Pseudoastrosphaeriella bambusae, Pseudoxylomyces elegans, Tubeufia aquatica and T. cylindrothecia. Dendryphiella phitsanulokensis and Tubeufia roseohelicospora are synonymized with D. vinosa and T. tectonae, respectively. Six orders, 43 families and 145 genera which belong to freshwater Dothideomycetes are reviewed. Of these, 46 genera occur exclusively in freshwater habitats. A world map illustrates the distribution of freshwater Dothideomycetes.
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Introduction
Shearer (1993a) reviewed the freshwater ascomycota and provided a definition and methods to study their taxonomy, systematics, geographical distribution, ecology, and evolution. This definition and the study techniques have since commonly been used (e.g., Zhang et al. 2017a; Dong et al. 2018; Lu et al. 2018b; Luo et al. 2019; Yang et al. 2019b). Unlike other fungi, which can be often traced to a specific host, freshwater fungi have mostly been collected from “submerged wood” (Wei et al. 2018; Yu et al. 2018; Wang et al. 2019). Thus, there has been little research on the hosts of freshwater fungi. The geographical distribution of freshwater fungi is also unclear and little can be concluded as distribution patterns are still largely based on the locations of mycologists (Shearer 1993a); thus further work are needed in these areas.
Dothideomycetes and Sordariomycetes, the largest classes of Ascomycota, have been comprehensively reviewed (e.g., Hyde et al. 2013, 2020c; Maharachchikumbura et al. 2016; Hongsanan et al. 2020a, b). Some websites, e.g. (http://fungi.life.illinois.edu/) (Shearer and Raja 2010), (https://www.marinefungi.org/) (Jones et al. 2019), (https://www.dothideomycetes.org/) (Pem et al. 2019a) and (https://www.freshwaterfungi.org/) (Calabon et al. 2020), are devoted to taxonomy and classification of Dothideomycetes, provide a database of freshwater ascomycetes and online resources for marine fungi. There has been an increased interest in the taxonomy and phylogeny of freshwater fungi (Lu et al. 2018b; Yang et al. 2018; Bao et al. 2019b, c; Boonmee et al. 2019), but further research will be carried out. Luo et al. (2019) gave accounts of freshwater Sordariomycetes and provided a modified backbone tree and detailed information on distribution, holotypes, sequence data and sexual-asexual morph connections of taxa. They also introduced 47 new taxa based on fresh collections from China and Thailand, which indicated there is a high diversity of freshwater Sordariomycetes.
In this article, a comprehensive study on freshwater Dothideomycetes is carried out based on new collections from China, Egypt and Thailand, as well as studies of specimens in fungal herbaria and literature reviews. Multigene phylogenetic analyses and morphological studies have resulted in nine new genera, 33 new species, 16 new combinations and 17 new geographical and habitat records being reported. Considering that many freshwater fungi are scattered in Dothideomycetes and the study of freshwater fungi have greatly advanced, there is a need to revise all freshwater Dothideomycetes with updated knowledge, and to provide a better understanding of their morphology and phylogeny. This monograph on freshwater Dothideomycetes provides the latest generic concepts, descriptions, illustrations and keys to genera and species. Using data from this study, we present several common morphological traits that appear to be adaptations of microfungi that live in flowing freshwater. Additionally, the global distribution of freshwater Dothideomycetes is reviewed in this study to show the poorly studied areas.
Materials and methods
Sample collection and specimen examination
Submerged wood was mostly collected from lentic or lotic streams, lakes or rivers in China and Thailand as part of a north-south survey (Hyde et al. 2016a), and from the river Nile in Egypt between 2010 to 2019. The principle of processing samples, including collection, incubation, isolation and examination, following Shearer (1993a). The detailed procedure of single spore isolation follows Chomnunti et al. (2014). Pseudoparaphyses are observed at 100× using a Nikon ECLIPSE Ni compound microscope fitted with a Canon EOS 600D digital camera. Two types of pseudoparaphyses, cellular and trabeculate, are defined if they are clearly seen. Herbarium specimens are deposited in the herbarium of Mae Fah Luang University (MFLU), Chiang Rai, Thailand and the herbarium of Cryptogams Kunming Institute of Botany Academia Sinica (KUN-HKAS), Kunming, China. Living cultures are deposited in the Mae Fah Luang University Culture Collection (MFLUCC), Chiang Rai, Thailand and Kunming Institute of Botany culture collection (KUMCC), Kunming, China. Facesoffungi and Index Fungorum numbers are registered as in Jayasiri et al. (2015) and Index Fungorum (2020).
DNA extraction, PCR amplification and sequencing
Cultures were grown on PDA at room temperature (25–27 °C) and a Biospin Fungus Genomic DNA Extraction Kit (Bioer Technology Co., Hangzhou, P.R. China) was used to extract total genomic DNA from the fresh mycelium according to the manufacturer’s instructions. Fragments of five loci were amplified with polymerase chain reaction (PCR). Primer pairs LR0R/LR5, NS1/NS4, ITS5/ITS4, EF1-EF1-983F/EF1-2218R and fRPB2-5F/fRPB2-7cR are used for LSU, SSU, ITS, TEF and RPB2, respectively. The amplifications were carried out using the method described by Zhang et al. (2017a). The PCR products were viewed on 1% agarose electrophoresis gels stained with ethidium bromide. Sequencing of five loci were carried out by Shanghai Sangon Biological Engineering Technology & Services Co. Shanghai, P.R. China.
Phylogenetic analysis
The sequences generated in this study were supplemented with other Dothideomycetous sequences obtained from GenBank, based on blast searches and relevant literatures. The accession numbers used in the multigene analyses were provided in supplementary material 1 and newly obtained strains with their accession numbers were shown in supplementary material 2. Multiple sequence alignments were generated with MAFFT v. 7 (https://mafft.cbrc.jp/alignment/server/index.html) (Kuraku et al. 2013; Katoh et al. 2019). The alignments were visually improved with BioEdit (Hall 1999). Phylogenetic analyses of the combined aligned dataset consisted of maximum likelihood (ML) and Bayesian inference (BI). Maximum likelihood (ML) analysis was performed at the CIPRES Science Gateway v.3.3 (https://www.phylo.org/portal2/home.action) (Miller et al. 2010). The final tree was selected among suboptimal trees from each run by comparing likelihood scores under the GTRGAMMA substitution model. The best-fit models for the Bayesian analyses were selected with MrModeltest v. 2.2 (Nylander 2004). The best-fit model GTR+I+G for LSU, ITS and RPB2, and HKY+I+G for TEF. Six simultaneous Markov chains were run for one million generations and trees were sampled every 100th generation and 10000 trees were obtained. The first 2500 trees representing the burn-in phase of the analyses were discarded, while the remaining 7500 trees were used for calculating posterior probabilities in the majority rule consensus tree. Phylogenetic tree was visualized using FigTree v1.4.0 (http://tree.bio.ed.ac.uk/software/figtree/, Rambaut 2012). Sequences derived in this study are deposited in GenBank.
Results
Phylogenetic analysis of combined LSU, ITS, TEF and RPB2 sequence data
The combined LSU, ITS, TEF and RPB2 sequence dataset were employed for species of Dothideomycetes. The alignment comprised 714 strains with an alignment length of 5882 total characters including gaps. The RAxML analysis resulted in a best scoring likelihood tree selected with a final value for the combined dataset ln L = − 216610.299349. The matrix has 4462 distinct alignment patterns, with 70.36% of undetermined characters or gaps. Estimated base frequencies are as follows: A = 0.238070, C = 0.259088, G = 0.278997, T = 0.223845; substitution rates AC = 1.423061, AG = 3.547230, AT = 1.643052, CG = 1.083323, CT = 7.578123, GT = 1.000000; gamma distribution shape parameter a = 0.439170 (Fig. 1).
Taxonomy
In this section, each freshwater genus is treated with a generic description and notes. A list with freshwater distribution and a key to freshwater species within each genus are provided. A key to freshwater genera within each family is also provided. An illustration of new species, new collections or line-drawings is provided after each entry, where possible. The freshwater distribution mainly follows an online resource for freshwater fungi (http://fungi.life.illinois.edu/) and published papers. The species is marked with an asterisk if there are published sequences deposited in GenBank. Freshwater Dothideomycetes are distributed in six orders, viz. Jahnulales, Kirschsteiniotheliales, Minutisphaerales, Natipusillales, Pleosporales and Tubeufiales; a few are scattered in Dothideomycetes families/genera incertae sedis. Classification and list of freshwater Dothideomycetes are shown in Table 1.
*Denotes species having sequence data in GenBank
Jahnulales K.L. Pang, Abdel-Wahab, El-Shar., E.B.G. Jones & Sivichai, Mycol. Res. 106(9): 1033 (2002)
Aliquandostipitaceae Inderb., Am. J. Bot. 88(1): 54 (2001)
Key to freshwater sexual genera of Aliquandostipitaceae
-
1.
Ascomata hyaline or slightly pigmented………2
-
1.
Ascomata dark………3
-
2.
Ascospores with longitudinal sulcate striations, without appendages or sheath………Megalohypha
-
2.
Ascospores lacking longitudinal sulcate striations, often with a large sheath………Aliquandostipite
-
3.
Peridium composed of single row of cells………………………Neojahnula
-
3.
Peridium not as above………4
-
4.
Ascospores without sheath or appendage………Jahnula
-
4.
Ascospores with sheath or appendage………5
-
5.
Ascospores surrounded by a wavy mucilaginous sheath………Pseudojahnula
-
5.
Ascospores mostly with a refractive mucilaginous pad at each end………Ascagilis
Aliquandostipite Inderbitzin, Am. J. Bot. 88(1): 54 (2001)
Saprobic on submerged wood or fallen, decorticated branch. Sexual morph: Mycelium visible on the substratum, of wide hyphae (> 10 µm and up to 50 µm wide), which may bear ascomata. Ascomata scattered to clustered or gregarious, immersed to erumpent or superficial, uniloculate, globose to broadly ellipsoidal, dimorphic, with or without stalk-like hypha attached to the base, hyaline or pale brown when young, turn to dark brown with age, membranous, papillate. Peridium thin, one-layered, composed of pale brown, thin-walled cells of textura angularis to globosa. Pseudoparaphyses numerous, cellular, sparsely branched, hyaline, septate. Asci 8-spored, bitunicate, fissitunicate, clavate, with thickened apical region. Ascospores bi- to multi-seriate, variably arranged, oval, pale brown, 1-septate, constricted at the septum, usually asymmetric, mostly with a well-developed hyaline sheath (Inderbitzin et al. 2001). Asexual morph: Undetermined.
Type species: Aliquandostipite khaoyaiensis Inderb.
Notes: Aliquandostipite was introduced to accommodate two species A. khaoyaiensis Inderb. and A. sunyatsenii Inderb., which form dimorphic ascomata (sessile and stalked) and the widest hyphae known from ascomycetes (Inderbitzin et al. 2001). However, with Jahnula sequences added in the phylogenetic tree, A. sunyatsenii clustered in Jahnula with high bootstrap support, which was therefore transferred to Jahnula based on limited data (Pang et al. 2002). Among six species recorded in Index Fungorum (2020), four have been confirmed in Aliquandostipite with molecular data (Huang et al. 2018; Hyde et al. 2019). Aliquandostipite is similar to Jahnula, but can be distinguished from the latter by its hyaline or less pigmented ascomata and larger asci and ascospores.
According to our observations and literature, the ascospores of A. crystallinus Raja et al., A. khaoyaiensis and A. minuta Raja & Shearer form acicular crystals when stored in lactic acid and glycerin (Raja et al. 2005; Raja and Shearer 2007). These three taxa, however, can be distinguished based on the gelatinous sheath and appendages on ascospores. Aliquandostipite siamensiae (Sivichai & E.B.G. Jones) J. Campb. et al. is the only species producing dimorphic ascospores. Aliquandostipite manochiae Sri-indr. et al. is distinct in that it has branched and anastomosing pseudoparaphyses, lacking arcicular crystals within the spores, and ascospore size (Liu et al. 2015). Aliquandostipite manochiae might be synonymous with A. khaoyaiensis (Inderbitzin et al. 2001) based on their similar morphological features, overlapping dimension of ascomata, asci, and ascospores, and their freshwater habitats. Molecular data are necessary to confirm A. manochii as a unique species (Fig. 2).
List of freshwater Aliquandostipite species
*Aliquandostipite crystallinus Raja, A. Ferrer & Shearer, Mycotaxon 91: 208 (2005); Fig. 3e, g–i
Freshwater distribution: Costa Rica (Raja et al. 2005), Panama (Raja et al. 2005), Peru (Shearer et al. 2015), USA (Raja et al. 2005, 2009b), Venezuela (Raja et al. 2005)
*Aliquandostipite khaoyaiensis Inderbitzin, Am. J. Bot. 88: 54 (2001)
Facesoffungi number: FoF09158; Figs. 3a–d, f, 4
Freshwater distribution: Costa Rica (Raja et al. 2005), USA (Raja et al. 2009b), Thailand (this study)
Saprobic on submerged wood. Sexual morph: Ascomata 220–240 μm high, 190–210 μm diam., hyaline to pale brown, become dark brown with age, scattered, superficial, sometimes seated in a pseudostroma, globose or subglobose, sessile, membranous, with ostiolate papilla. Peridium 25–40 μm thick, membranous, composed of thin-walled, pale brown, compressed cells of textura angularis. Pseudoparaphyses 2 μm diam., numerous, cellular, sparsely branched, hyaline, septate. Asci 115–175 × 35–65 μm (\( {\bar{\text{x}}} \) = 145 × 45 μm, n = 20), 8-spored, bitunicate, fissitunicate, clavate, thickened at the apex, sessile or short pedicellate, with a well-developed ocular chamber. Ascospores 50–70 × 14.5–19.5 μm (\( {\bar{\text{x}}} \) = 63 × 17 μm, n = 20), variably arranged in asci, oval, hyaline to pale brown, 1-septate, constricted at the septum, asymmetric, upper cell slightly shorter and wider than lower cell, guttulate, straight or curved, thin-walled, smooth, sheathed. Sheath first appressed to the ascospore wall, expanding and detaching from the polar regions when mounted in water, becoming balloon-like at the two poles, finally surrounding the entire ascospore. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 30 mm in 45 days at 25 °C, grey from above, dark brown from below, surface rough, with dense mycelium, mostly immersed in culture, dry, edge entire.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat827-1 (MFLU 18-1573), living culture MFLUCC 18-1249; ibid., hat827-2 (HKAS 105024), living culture KUMCC 19-0039; Chestnut Hill, on submerged wood in a stream, 10 May 2018, W. Dong, hat460-1 (MFLU 18-1554); ibid., hat460-2 (HKAS 105066), living culture KUMCC 19-0083.
Notes: Our two new isolates MFLUCC 18-1249 and KUMCC 19-0083 are identified as Aliquandostipite khaoyaiensis based on their identical LSU, SSU, ITS sequence data and morphology, although they lack a stalked ascomata. The new isolates cluster with A. khaoyaiensis and A. siamensis with high bootstrap support (Fig. 14), which appears to be conspecific. However, our isolates must be A. khaoyaiensis because of its typical sheath. Aliquandostipite khaoyaiensis has monomorphic, pale brown ascospores with well-developed sheath (Inderbitzin et al. 2001). While A. siamensis has dimorphic, hyaline or brown ascospores without sheath (Pang et al. 2002). Aliquandostipite siamensis lacks ITS sequence data and needs fresh material to confirm its phylogenetic difference with A. khaoyaiensis. This is a new geographical record for A. khaoyaiensis from parts of Thailand.
Aliquandostipite manochii Sri-indr., Boonyuen, Suetrong, K.L. Pang & E.B.G. Jones, Fungal Diversity 72: 103 (2015)
Freshwater distribution: Thailand (Liu et al. 2015)
Aliquandostipite minuta Raja and Shearer, Mycoscience 43: 395 (2007); Fig. 5a–e
Freshwater distribution: USA (Raja and Shearer 2007; Raja et al. 2009b)
Aliquandostipite separans (Abdel-Wahab & El-Sharouney) J. Campb., Raja A. Ferrer, Sivichai & Shearer, Can. J. Bot. 85: 881 (2007)
Basionym: Patescospora separans Abdel-Wahab & El-Sharouney, Mycol. Res. 106: 1033 (2002)
Freshwater distribution: Egypt (Pang et al. 2002)
*Aliquandostipite siamensiae (Sivichai & E.B.G. Jones) J. Campb., Raja A. Ferrer, Sivichai & Shearer, Can. J. Bot. 85: 879 (2007)
Basionym: Jahnula siamensiae Sivichai & E.B.G. Jones, Mycol. Res. 106: 1037 (2002)
Freshwater distribution: Thailand (Pang et al. 2002), USA (Raja et al. 2009b)
Key to freshwater Aliquandostipite species
-
1.
Ascospores with sheath………2
-
1.
Ascospores with narrow sheath or without sheath………A. separans
-
2.
Ascospores dimorphic………A. siamensiae
-
2.
Ascospores monomorphic………3
-
3.
Ascospores without appendages………A. khaoyaiensis
-
3.
Ascospores with appendages………4
-
4.
Ascospores with small apical appendages………A. crystallinus
-
4.
Ascospores with numerous filamentous appendages………A. minuta
Jahnula Kirschst., Annls mycol. 34(3): 196 (1936)
Saprobic on submerged wood. Sexual morph: Ascomata semi-immersed to erumpent, become superficial with base remaining immersed, solitary or clustered in small groups, globose to subglobose, unilocular, brown to dark brown, membranous, with a stalk-like strand or stoloniferous hyphae attached to the substratum, or covered by sparse hair-like projections, with ostiolate papilla. Peridium variable in thickness, comprising a few layers of relatively large, thin-walled, light brown cells of textura angularis. Pseudoparaphyses cellular, persistent, filiform or hypha-like, hyaline, sparsely septate. Asci 8-spored, bitunicate, fissitunicate, mostly cylindrical, short-pedicellate, with an ocular chamber and sometimes with a faint ring. Ascospores mostly uniseriate, ellipsoid-fusiform, apical cell slightly larger, both cells tapering with rounded ends, reddish brown or dark brown, l-septate, straight or curved (definition sensu stricto from Hawksworth (1984), Hyde and Goh (1999b) and Raja and Shearer (2006)). Asexual morph: Undetermined.
Type species: Jahnula aquatica (Kirschst.) Kirschst.
Notes: Jahnula is undoubtedly polyphyletic (Hyde et al. 2013, 2017, 2019; Huang et al. 2018) and Jahnula sensu stricto was mentioned in Huang et al. (2018), and Hyde et al. (2013). Hyde et al. (2013) suggested that taxonomic changes are needed for taxa in Jahnula sensu lato, but more jahnula-like species need to be collected and sequenced. We accept three species, J. aquatica, J. granulosa K.D. Hyde & S.W. Wong and J. rostrata Raja & Shearer in Jahnula sensu stricto, which have been collected from freshwater habitats (listed below). These three species share common characters in having dark ascomata with few appendages attached to the base, and ellipsoid-fusiform, brown, l-septate ascospores with wider apical cell (Hawksworth 1984; Hyde and Wong 1999; Raja and Shearer 2006). Asci of J. aquatica are cylindrical, those of J. granulosa are obclavate and those of J. rostrata are clavate. Jahnula aquatica has smooth-walled ascospores without a sheath, while J. granulosa has granular-walled ascospores with a thin mucilaginous sheath. Jahnula rostrata is similar to J. granulosa by rough-walled ascospores, but differs in having an irregularly striated pattern. These three species formed a well-supported and stable clade in previous publications (Huang et al. 2018; Hyde et al. 2019) and in this study (Fig. 14).
The type species, Jahnula aquatica commonly occurs in freshwater habitats as listed below. The lectotype of J. aquatica was examined, illustrated and described by Hawksworth (1984). Jahnula aquatica is characterized by ascomata attached to the substratum by subiculum-like hyphae, peridium uneven in thickness, cylindrical asci, elongate-ellipsoid to very broadly fusiform, reddish brown, smooth, moderately thick-walled ascospores without a distinct gelatinous sheath (Hawksworth 1984). The sequences of two isolates R68-1 and R68-2 (not type) were obtained by Raja and Shearer (2006), recognized and used for current phylogenetic analyses (Suetrong et al. 2011a; Huang et al. 2018; Hyde et al. 2019).
Xylomyces chlamydosporus Goos et al. was considered to be the asexual state of Jahnula aquatica based on fusiform chlamydospores produced in culture (Sivichai et al. 2011). However, the phylogenetic analyses did not support this conclusion because J. aquatica and X. chlamydosporus scattered in different clades within Jahnulales (Campbell et al. 2007; Suetrong et al. 2011a; this study, Fig. 14).
We introduce two new genera Neojahnula and Pseudojahnula to accommodate two known species Jahnula australiensis K.D. Hyde and J. potamophila K.D. Hyde & S.W. Wong, respectively. Seven species, i.e. J. bipolaris, J. guttulaspora, J. queenslandica, J. seychellensis, J. submersa, J. sunyatsenii and J. thailandensis, which are phylogenetically distant from J. aquatica, are transferred to Ascagilis K.D. Hyde. Nine species, i.e. J. apiospora, J. appendiculata, J. bipileata, J. dianchia, J. morakotii, J. poonythii, J. purpurea, J. sangamonensis and J. systyla, are placed in Jahnula sensu lato.
For convenience and practicality, we have excluded Jahnula systyla K.D. Hyde & S.W. Wong from the key, because we believe it may be phylogenetically related to Aliquandostipite, pending future phylogenetic studies (Fig. 6).
List of freshwater Jahnula sensu stricto species
*Jahnula aquatica (Plöttner & Kirschst.) Kirschst., Ann., Mycol. 34: 196 (1936); Fig. 7
Basionym: Melanopsamma aquatica Kirschst., Krypt.-Fl. Brandenburg (Leipzig) 7(2): 226 (1911)
Freshwater distribution: China (Ho 1998), France (Fournier et al. 2010), Germany (Kirschstein 1936; Hawksworth 1984), Malaysia (Ho et al. 2001), South Africa (Hyde and Wong 1999), Thailand (Sivichai et al. 2011), USA (Raja and Shearer 2006; Raja et al. 2009b)
*Jahnula granulosa K.D. Hyde & S.W. Wong, Nova Hedwig. 68: 497 (1999)
Freshwater distribution: China (Cai et al. 2002a), South Africa (Hyde and Wong 1999), Thailand (Suetrong et al. 2011a)
*Jahnula rostrata Raja & Shearer, Mycologia 98: 325 (2006)
Facesoffungi number: FoF09237; Fig. 8
Freshwater distribution: China (this study), USA (Raja and Shearer 2006; Raja et al. 2009b)
Saprobic on submerged wood. Sexual morph: Ascomata 320–420 × 310–330 μm, superficial, solitary to scattered, subglobose or pyriform, brown to black, rough-walled, with ostiolate papilla. Neck 48–75 × 74–98 μm, composed of subglobose cells diverging from the ostiole. Peridium 25–40 μm wide, two-layered, outer layer composed of large, dark brown, thick-walled cells of textura angularis, inner layer composed of compressed, hyaline, thin-walled cells of textura angularis. Pseudoparaphyses 2.5–3.5 μm wide, cellular, hypha-like, hyaline, septate, unbranched. Asci 135–200 × 21–32 μm (\( {\bar{\text{x}}} \) = 160 × 28 μm, n = 15), 8-spored, bitunicate, fissitunicate, clavate, short pedicellate, with an ocular chamber. Ascospores 28–40 × 11–17 μm (\( {\bar{\text{x}}} \) = 35 × 13.5 μm, n = 15), overlapping biseriate, ellipsoidal or broadly fusiform, with rounded or occasionally acute ends, upper cell slightly broader than lower cell, hyaline to brown when young, dark brown at maturity, 1-septate, constricted at the septum, with thick and dark band at septum when mature, rough-walled, with minute striated pattern, guttulate, with or without sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colonies irregular, reaching 35 mm in 30 days at 25 °C, dark from above and below, dry, hairy, dense in the centre, becoming sparse at the edge.
Material examined: CHINA, Yunnan Province, Kunming, Liangwang National Wetland Park, on submerged wood in a stream, 19 March 2019, C.X. Li, L15 (MFLU 20-0435).
Notes: Our collection MFLU 20-0435 is identified as Jahnula rostrata based on very similar morphology and only one and one nucleotide difference in LSU and SSU sequence data between MFLU 20-0435 and F4-3, respectively. They form a well-supported clade in our phylogenetic analysis (Fig. 14). MFLU 20-0435 has thinner asci than the holotype (135–200 × 21–32 μm vs. 152–190 × 32–40 μm) (Raja and Shearer 2006). Our collection is a new geographical record for J. rostrata from China. Jahnula rostrata (F4-3) lacks ITS sequence data, we supplement ITS sequence for this species in this study.
Key to freshwater Jahnula sensu stricto species
-
1.
Ascospores smooth-walled………J. aquatica
-
1.
Ascospores rough-walled………2
-
2.
Ascospores granular-walled………J. granulosa
-
2.
Ascospores with an irregularly striated pattern………J. rostrata
List of freshwater Jahnula sensu lato species
Jahnula apiospora A. Carter, Raja & Shearer, Mycoscience 49: 326 (2008); Fig. 6d, i
Freshwater distribution: Canada (Raja et al. 2008)
*Jahnula appendiculata Pinruan, K.D. Hyde & E.B.G. Jones, Sydowia 54: 243 (2002); Fig. 9
Freshwater distribution: Peru (Shearer et al. 2015), Thailand (Pinruan et al. 2002; Sivichai and Boonyuen 2010)
*Jahnula bipileata Raja & Shearer, Mycologia 98: 321 (2006); Fig. 6c, j
Freshwater distribution: USA (Raja and Shearer 2006)
Jahnula morakotii Sivichai & Boonyuen, Mycotaxon 112: 476 (2012)
Freshwater distribution: Thailand (Sivichai and Boonyuen 2010)
Jahnula poonythii K.D. Hyde & S.W. Wong, Nova Hedwig. 68: 499 (1999)
Freshwater distribution: China (Cai et al. 2002a; Luo et al. 2004), Mauritius (Hyde and Wong 1999), Mexico (Gonzalez and Chavarria 2005)
Jahnula purpurea J. Fourn., Raja & Shearer, Mycokeys 9: 30. (2015)
Freshwater distribution: Martinique (Fournier et al. 2015)
*Jahnula sangamonensis Shearer & Raja, Mycologia 98: 327 (2006)
Freshwater distribution: USA (Raja and Shearer 2006; Raja et al. 2009b)
Jahnula systyla K.D. Hyde & S.W. Wong, Nova Hedwig. 68: 506 (1999)
Freshwater distribution: Australia (Hyde and Wong 1999), China (Ho 1998), Malaysia (Ho et al. 2001)
Key to freshwater Jahnula sensu lato species
-
1.
Ascospores without modification (no appendages/sheath/caps)………2
-
1.
Ascospores equipped with modification (appendages/sheath/caps)………6
-
2.
Ascospores asymmetric………J. apiospora
-
2.
Ascospores symmetric………3
-
3.
Ascomata stain substrate purple………J. purpurea
-
3.
Ascomata not as above………4
-
4.
Ascomata with a short but prominent neck, endoasci extend up to 500 µm long in water………J. sangamonensis
-
4.
Ascomata with a short papilla, endoasci not extending………5
-
5.
Ascomata with stalk-like strands attached to the base, with a few sparse hair-like projections………J. poonythii
-
5.
Ascomata without any appendages………J. dianchia
-
6.
Ascospores without unfurling bipolar appendages………J. bipileata
-
6.
Ascospores with long unfurling bipolar appendages………7
-
7.
Ascospores 18–20 × 5–6 μm………J. morakotii
-
7.
Ascospores 48–55 × 23–26 μm………J. appendiculata
Ascagilis K.D. Hyde, Aust. Syst. Bot. 5(1): 109 (1992)
Saprobic on submerged wood. Sexual morph: Ascomata semi-immersed or superficial, solitary, scattered or gregarious, globose or subglobose, coriaceous, black, ostiolate. Peridium comprising several layers of thin-walled, brown, angular cells. Pseudoparaphyses numerous, cellular, hyaline, thin, septate, branched. Asci 8-spored, clavate, obclavate, broadly or narrowly cylindrical, fissitunicate, sometimes expanding 4–5 times longer than original length, with an ocular chamber and ring. Ascospores bi- to tri-seriate, 1-septate, brown, mostly with a refractive mucilaginous pad at each end. Asexual morph: Undetermined.
Type species: Ascagilis bipolaris K.D. Hyde
Notes: Ascagilis was introduced to accommodate a jahnula-like species, A. bipolaris, characterized by clavate to cylindrical asci with an ocular chamber and ring and fusiform to ellipsoidal, 1-septate, brown ascospores with a pad at each end (Hyde 1992b). Ascagilis was suppressed since the type species A. bipolaris was transferred to Jahnula (Hyde and Wong 1999) and they thought the fusiform to ellipsoidal ascospores with bipolar pads of Ascagilis was insufficient to separate these two genera. Jahnula has been shown to be polyphyletic in previous publications (Hyde et al. 2013, 2017, 2019; Huang et al. 2018) and in this study. The clade comprising A. bipolaris and six other species is phylogenetically distant from Jahnula sensu stricto (Fig. 14). Additionally, most species including our new species, A. submersa and A. thailandensis, have a refractive mucilaginous pad at each end, which is lacking in Jahnula sensu stricto. All species in this clade cluster with strong bootstrap support (Fig. 14). We therefore, resurrect Ascagilis and transfer four species and introduce two new species in the genus (see list below). The mucilaginous pad of ascospores is treated as a noticeable characteristic of Ascagilis.
List of freshwater Ascagilis species
*Ascagilis bipolaris K.D. Hyde, Aust. Syst. Bot. 5(1): 111 (1992); Fig. 6f, g
Synonymy: Jahnula bipolaris (K.D. Hyde) K.D. Hyde, Nova Hedwigia 68(3–4): 494 (1999)
Freshwater distribution: Australia (Hyde 1992b; Hyde and Wong 1999), China (Tsui et al. 2000; Tsui and Hyde 2004), Costa Rica (Raja and Shearer 2006), Malaysia (Ho et al. 2001), Peru (Shearer et al. 2015), Thailand (Suetrong et al. 2011a), USA (Raja et al. 2009b)
*Ascagilis guttulaspora (Qing Tian, Y.Z. Lu & K.D. Hyde) W. Dong, Doilom & K.D. Hyde, comb. nov.
Index Fungorum number: IF557893; Facesoffungi number: FoF09228
Basionym: Jahnula guttulaspora Qing Tian, Y.Z. Lu & K.D. Hyde, Fungal Diversity 87: 6 (2017)
Freshwater distribution: China (Hyde et al. 2017)
*Ascagilis queenslandica (Dayarathne, Fryar & K.D. Hyde) W. Dong, Doilom & K.D. Hyde, comb. nov.
Index Fungorum number: IF557894; Facesoffungi number: FoF09229
Basionym: Jahnula queenslandica Dayarathne, Fryar & K.D. Hyde, Fungal Diversity 96: 91 (2019)
Freshwater distribution: Australia (Hyde et al. 2019)
*Ascagilis seychellensis (K.D. Hyde & S.W. Wong) W. Dong, Doilom & K.D. Hyde, comb. nov.
Index Fungorum number: IF557895; Facesoffungi number: FoF09230
Basionym: Jahnula seychellensis K.D. Hyde & S.W. Wong, Nova Hedwig. 68: 504 (1999); Fig. 6b
Freshwater distribution: Brazil (Barbosa et al. 2013), Costa Rica (Raja and Shearer 2006), Seychelles (Hyde and Wong 1999)
*Ascagilis submersa W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557896; Facesoffungi number: FoF09238; Fig. 10
Etymology: in reference to the submerged habitats of the fungus
Holotype: MFLU 18-1527
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 160–250 μm diam., black, solitary or scattered, superficial, globose or subglobose, with several long, brown to dark brown appendages which are procumbent on the substrate surface, membranous. Peridium 30–35 μm thick, composed of 4–5 layers of thick-walled, olive to dark brown, compressed cells of textura angularis, with 2 layers of flattened, compressed, hyaline cells inwardly. Pseudoparaphyses 3 μm diam., numerous, cellular, hypha-like, hyaline, septate, embedded in a gelatinous matrix. Asci 110–160 × 35–42 μm (\( {\bar{\text{x}}} \) = 135 × 38 μm, n = 10), 8-spored, bitunicate, thick-walled, broadly obclavate, with thick-walled apex and well-developed ocular chamber, completely filled by ascospores, short pedicel observed only when young. Ascospores 37.5–41 × 17–19 μm (\( {\bar{\text{x}}} \) = 40 × 18 μm, n = 20), overlapping biseriate and uniseriate near the apex, straight or slightly curved, hyaline when young, pale brown to brown when mature, 1-septate, constricted at the septum, ellipsoidal, guttulate, thin-walled, smooth, with bipolar, helmet-shaped appendages. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 10 mm in 10 days at 25 °C, dark brown from above and below, surface rough, with sparse mycelium, dry, edge entire.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, 20180513-1 (MFLU 18-1527, holotype), ex-type living culture MFLUCC 18-1143; ibid., 20180513-2 (HKAS 104996, isotype), ex-type living culture KUMCC 19-0013.
Notes: Ascagilis submersa clusters with A. queenslandica, A. sunyatsenii and A. thailandensis (Fig. 14). Ascagilis submersa is similar to A. sunyatsenii in having ellipsoidal, pale brown ascospores with bipolar helmet-shaped appendages (Inderbitzin et al. 2001). However, A. sunyatsenii has saccate, ovoid to elongate asci and longer ascospores ((39–)46–52 × 16–23 μm) contrasting with broadly obclavate asci and shorter ascospores (37.5–41 × 17–19 μm) in A. submersa (Inderbitzin et al. 2001). Ascagilis submersa has olive peridium and ascospores, which are unique in the genus and different from the dark pigmented peridium and light brown ascospores of A. sunyatsenii. Additionally, A. sunyatsenii has two types of ascomata, sessile and stalked, while A. submersa has only sessile ascomata and with several appendages which are procumbent on the substrate surface (Inderbitzin et al. 2001). Because of scarcity of some nucleic acid genes, only ITS sequence can be compared. There are two nucleotide differences in ITS sequence data, but only crossing 207 nucleotides. The distinct morphology of A. submersa provides strong evidence to be a new species in Ascagilis.
*Ascagilis sunyatsenii (Inderb.) W. Dong, Doilom & K.D. Hyde, comb. nov.
Index Fungorum number: IF557897; Facesoffungi number: FoF09239
Basionym: Aliquandostipite sunyatsenii Inderb., Am. J. Bot. 88(1): 57 (2001)
Synonymy: Jahnula sunyatsenii (Inderb.) K.L. Pang, E.B.G. Jones & Sivichai, Mycol. Res 106: 1037 (2002)
Freshwater distribution: China (Inderbitzin et al. 2001; Pang et al. 2002)
*Ascagilis thailandensis W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557898; Facesoffungi number: FoF09240; Fig. 11
Etymology: in reference to Thailand, where the holotype was collected
Holotype: MFLU 18-1514
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 280–320 μm high, 200–250 μm diam., black, scattered, superficial with base immersed in host tissue, conical, membranous, coriaceous, with short ostiolate papilla. Peridium 30–40 μm thick, composed of 4–5 layers of thin-walled, pale brown, large cells of textura angularis. Pseudoparaphyses 3.5 μm diam., numerous, cellular, hypha-like, hyaline, septate. Asci 125–185 × 24–30 μm (\( {\bar{\text{x}}} \) = 162 × 27.5 μm, n = 5), 8-spored, bitunicate, broadly or narrowly cylindrical, with an ocular chamber, short pedicellate. Ascospores 33–48.5 × 11–16 μm (\( {\bar{\text{x}}} \) = 41 × 13 μm, n = 30), biseriate or uniseriate above ascus center and overlapping biseriate near the center or base, brown, 1-septate, slightly constricted at the septum, irregularly fusiform, mostly curved, tapering at apical cell and slightly flattened or rounded at the basal cell, guttulate, thin-walled, smooth, with small, inconspicuous pads at one or both apices. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 5 mm in 5 days at 25 °C, olive brown from above, brown from below, surface rough, with sparse mycelium, dry, edge entire.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, 20180524 (MFLU 18-1514, holotype), ex-type living culture MFLUCC 18-1149; ibid., Chestnut Hill, on submerged wood in a stream, 10 May 2018, W. Dong, hat454-1 (MFLU 18-1546), living culture MFLUCC 18-1247; ibid., hat454-2 (HKAS 105022), living culture KUMCC 19-0037.
Notes: Ascagilis thailandensis clusters with A. queenslandica, A. submersa and A. sunyatsenii with low bootstrap support (Fig. 14). The phylogenetically closest species A. sunyatsenii only has ITS sequence data (323 nucleotides) in GenBank, which has three nucleotide differences with A. thailandensis. Due to the limited sequence data, A. sunyatsenii and A. thailandensis appear to represent the same species in our phylogenetic tree (Fig. 14). However, their morphological characteristics strongly support them to be the different species. Ascagilis sunyatsenii has two types of ascomata (sessile and stalked), saccate, ovoid to elongate asci and ellipsoidal ascospores with two conspicuous helmet-shaped appendages (Inderbitzin et al. 2001). Whereas, A. thailandensis has sessile ascomata, cylindrical asci and irregularly fusiform ascospores with small, inconspicuous pads. Ascagilis thailandensis can be easily distinguished from the other two phylogenetically related species A. queenslandica and A. submersa by ascospore shape, size and appendages (Hyde et al. 2019).
Ascagilis thailandensis is morphologically similar to A. guttulaspora in having nearly fusiform, smooth-walled, guttulate ascospores with tapering apical cell and slightly flattened basal cell. However, A. guttulaspora has smaller ascospores (29–33 × 8.5–10.5 μm vs. 33–48.5 × 11–16 μm) and without pads (Hyde et al. 2017). The ascomata of A. guttulaspora are attached to the substratum by wide, brown hyphae, while they are lacking in A. thailandensis (Hyde et al. 2017). Our phylogenetic analysis supports them to be the different species (Fig. 14).
Key to freshwater Ascagilis species
-
1.
Ascospores without mucilaginous pads………2
-
1.
Ascospores with mucilaginous pads at one or both ends………3
-
2.
Ascospores aseptate………A. queenslandica
-
2.
Ascospores 1-septate………A. guttulaspora
-
3.
Ascomata sessile………4
-
3.
Ascomata sessile and stalked………6
-
4.
Ascospores with inconspicuous pads at one or both ends………A. thailandensis
-
4.
Ascospores with conspicuous bipolar pads………5
-
5.
Ascospores 37.5–41 × 17–19 μm………A. submersa
-
5.
Ascospores 42–52 × 16–23 μm………A. bipolaris
-
6.
Ascospores monomorphic………A. sunyatsenii
-
6.
Ascospores dimorphic………A. seychellensis
Neojahnula W. Dong, H. Zhang & K.D. Hyde, gen. nov.
Index Fungorum number: IF557823; Facesoffungi number: FoF07688
Etymology: named refers to its morphological similarity to Jahnula
Saprobic on submerged wood. Sexual morph: Ascomata scattered or clustered in small groups, superficial, subglobose or obpyriform, brown to black, membranous, with scarcely projecting papilla, ostiolate, with few setae. Peridium thin, one-layered. Pseudoparaphyses numerous, cellular, hypha-like, hyaline, sparsely septate. Asci 8-spored, bitunicate, fissitunicate, cylindrical, sessile or short pedicellate, with an ocular chamber and faint apical ring. Ascospores uni- to bi-seriate, elongate, ellipsoidal, tapering towards the apices, brown, 1-septate, upper cell slightly wider than lower cell. Asexual morph: Undetermined.
Type species: Neojahnula australiensis (K.D. Hyde) W. Dong, H. Zhang & K.D. Hyde
Notes: Jahnula australiensis K.D. Hyde was collected from submerged wood in freshwater in Australia (Hyde 1993a). It was initially placed in Jahnula because the peridium comprises massive pseudoparenchymatous cells, which is the remarkable feature of Jahnula (Hyde 1993a). However, J. australiensis was shown to not belong to Jahnula sensu stricto and clustered basal to two asexual genera Brachiosphaera Nawawi and Speiropsis Tubaki with strong bootstrap support (Prihatini et al. 2008; Hyde et al. 2017; Huang et al. 2018; this study, Fig. 14). Jahnula australiensis is not supported in Jahnula because it has few setae surrounding the ascomata, a thin peridium comprising single row of cells, asci with an ocular chamber and faint apical ring and uni- to bi-seriate ascospores, these features are different from Jahnula. As suggested by Hyde et al. (2013), we transfer J. australiensis to a new genus, Neojahnula based on phylogenetic analyses and morphology.
List of freshwater Neojahnula species
*Neojahnula australiensis (K.D. Hyde) W. Dong, H. Zhang & K.D. Hyde, comb. nov.
Index Fungorum number: IF557899; Facesoffungi number: FoF09241; Fig. 12
Basionym: Jahnula australiensis K.D. Hyde, Aust. Syst. Bot. 6(2): 161 (1993)
Freshwater distribution: Australia (Hyde 1993a), Brunei (Ho et al. 2001), China (Ho et al. 2001), Peru (Shearer et al. 2015), Thailand (Suetrong et al. 2011a; this study) USA (Raja et al. 2009b)
Saprobic on submerged wood. Sexual morph: Ascomata 80–110 μm high, 100–130 μm diam., scattered or gregarious, superficial, subglobose or lenticulate when compressed, black, membranous, with scarcely projecting papilla, ostiolate, with few hyaline to pale brown hyphae. Peridium thin, 5–10 μm thick, composed of one row of large, thin-walled, brown to dark brown cells of textura angularis. Pseudoparaphyses 3 μm diam., numerous, cellular, hypha-like, hyaline, sparsely septate. Asci 135–175 × 17–19 μm (\( {\bar{\text{x}}} \) = 155 × 17.5 μm, n = 5), 8-spored, bitunicate, fissitunicate, cylindrical, sessile or short pedicellate, with an ocular chamber and faint apical ring. Ascospores 23–27.5 × 6–7.5 μm (\( {\bar{\text{x}}} \) = 25.5 × 7 μm, n = 15), uni- to bi-seriate, elongate, ellipsoidal, tapering towards the apices, rounded at the base, brown, 1-septate, constricted at the septum, upper cell slightly wider than lower cell, guttulate, mostly curved, smooth, thin-walled, without sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 20 mm in 25 days at 25 °C, reddish brown from above, dark brown to black from below, surface rough, with dense mycelium, fluffy, raised as a annulus around the margin, dry, edge entire.
Material examined: THAILAND, Prachuap Khiri Khan Province, on submerged wood in a stream, 30 July 2015, K.D. Hyde, 66D (MFLU 15-2711), living culture MFLUCC 15-0975.
Notes: Our collection MFLUCC 15-0975 clusters with two strains of Neojahnula australiensis (SS3613 and SS0665) with high bootstrap support (Fig. 14). SS3613 only has ITS and SS0665 only has SSU sequence data in GenBank, which are identical with MFLUCC 15-0975. The morphology of SS3613 and SS0665 cannot be compared as they were not provided in Prihatini et al. (2008) and Pang et al. (2002), respectively. The sequence data from ex-type strain of N. australiensis is lacking, but our collection MFLUCC 15-0975 has identical morphological characteristics with the holotype (BRIP 19208), except for longer asci (135–175 × 17–19 μm vs. 90–140 × 14–18 μm) (Hyde 1993a). Based on morphological characteristics and available sequence data, MFLUCC 15-0975 is identified as N. australiensis.
Pseudojahnula W. Dong, H. Zhang & K.D. Hyde, gen. nov.
Index Fungorum number: IF557824; Facesoffungi number: FoF07689
Etymology: named refers to its morphological similarity to Jahnula
Saprobic on submerged wood. Sexual morph: Ascomata solitary or gregarious, erumpent, become superficial with base remaining immersed, subglobose, obpyriform or almost conical, hyaline and then metallic grey, coriaceous, with ostiolate papilla, with algal associations. Peridium comprising several layers of relatively large, hyaline, thin-walled, angular cells and covered with sparse hyaline hairs. Pseudoparaphyses numerous, trabeculate, filamentous, hyaline, septate, unbranched between the asci, branching and anastomosing above. Asci 8-spored, bitunicate, fissitunicate, obclavate, pedicellate, with an ocular chamber and faint ring. Ascospores bi- to tri-seriate near the base, overlapping uniseriate near the apex, l-septate, light brown, ellipsoid-fusiform, surrounded by a mucilaginous sheath, which is wavy in outline. Asexual morph: Undetermined.
Type species: Pseudojahnula potamophila (K.D. Hyde & S.W. Wong) W. Dong, H. Zhang & K.D. Hyde
Notes: Jahnula potamophila is morphologically closest to Ascagilis bipolaris in ascospore size, but differs by narrow mucilaginous sheath which is wavy in outline (Hyde and Goh 1999b; Hyde and Wong 1999). Both species cluster distantly in Jahnulales (Fig. 14). The phylogenetic placement of J. potamophila is unstable, it clustered with Jahnula sensu stricto clade with low bootstrap support (Huang et al. 2018), but had good affinity in Hyde et al. (2017). With Megalohypha aqua-dulces and our new sequences added in the order, J. potamophila clustered with M. aqua-dulces with moderate bootstrap support (Hyde et al. 2019; this study, Fig. 14).
Jahnula potamophila has hyaline to metallic grey ascomata, a several-layered peridium comprising hyaline cells and covered with sparse hyaline hairs, obclavate asci with an ocular chamber and faint ring, and ascospores surrounded by a wavy mucilaginous sheath (Hyde and Wong 1999). These characteristics differ from Jahnula, therefore, Pseudojahnula is introduced to accommodate J. potamophila.
List of freshwater Pseudojahnula species
*Pseudojahnula potamophila (K.D. Hyde & S.W. Wong) W. Dong, H. Zhang & K.D. Hyde, comb. nov.
Index Fungorum number: IF557900; Facesoffungi number: FoF09242; Fig. 6a, e, h
Basionym: Jahnula potamophila K.D. Hyde & S.W. Wong, Nova Hedwigia 68(3–4): 499 (1999)
Freshwater distribution: Australia (Hyde and Wong 1999), Costa Rica (Raja and Shearer 2006), USA (Raja et al. 2009b)
Megalohypha A. Ferrer & Shearer, Ferrer, Sivichai & Shearer, Mycologia 99: 456 (2007)
Saprobic on submerged wood. Sexual morph: Ascomata superficial, uniloculate, globose to obpyriform, hyaline, membranous, with ostiolate papilla, stalked or sessile. Peridium composed of large, hyaline, thin-walled cells. Pseudoparaphyses numerous, trabeculate, filamentous, hyaline, septate, branched, anastomosing above the asci. Asci 8-spored, bitunicate, fissitunicate, broadly clavate or fusiform, short pedicellate, with or without an ocular chamber. Ascospores irregularly arranged, ellipsoidal, acutely tapered at apices, straight, brown to dark brown, 1-septate, symmetrical, rough-walled, longitudinally striate, without appendages or gelatinous sheath (Ferrer et al. 2007). Asexual morph: Undetermined.
Type species: Megalohypha aqua-dulces A. Ferrer & Shearer
Notes: Megalohypha is monotypic with M. aqua-dulces occurring on submerged decorticated wood in Panama and Thailand (Ferrer et al. 2007). Megalohypha can be easily distinguished from Aliquandostipite and Jahnula based on its pale to dark brown, 1-septate, rough-walled ascospores with longitudinally sulcate striations and without appendages or gelatinous sheath (Ferrer et al. 2007). It formed a moderately supported clade with Pseudojahnula (Hyde et al. 2019) and this study (Fig. 14).
List of freshwater Megalohypha species
*Megalohypha aqua-dulces A. Ferrer & Shearer, Mycologia 99(3): 458 (2007); Fig. 5f–j
Freshwater distribution: Panama (Ferrer et al. 2007), Thailand (Ferrer et al. 2007)
Key to freshwater asexual genera of Aliquandostipitaceae
-
1.
Chlamydospores long, multi-septate………Xylomyces
-
1.
Conidia tetraradiate with 4–8 appendages………Brachiosphaera
Brachiosphaera Nawawi, Descals, Nawawi & Webster, Trans. Br. Mycol. Soc. 67: 213 (1976)
Saprobic on submerged wood, wet wood and river foam. Sexual morph: Undetermined. Asexual morph: Colonies effuse, mycelium mostly immersed. Hyphae varying in width, septate, hyaline at first, turning olivaceous brown with age. Conidiophores macronematous, erect, unbranched, hyaline, septate, of variable length. Conidiogenous cells holoblastic, sympodial. Conidia acrogenous, tetraradiate, clustered in chains, ellipsoid or round-shaped, with 4–10 conidial arms, each 1–4-septate (Nawawi and Webster 1976; Suetrong et al. 2011a).
Type species: Brachiosphaera tropicalis Nawawi
Notes: Brachiosphaera species are commonly recorded in freshwater habitats as listed below. The genus is characterized by tetraradiate conidia with a round central cell with 4–10 arms, each of them 1–4-septate (Nawawi and Webster 1976; Suetrong et al. 2011a). The conidia of B. tropicalis consist of a brown, spherical body and furnished with 4–5 arms, which are longer than 1.5 times diam. of the central part (Nawawi and Webster 1976; Suetrong et al. 2011a). Currently, B. tropicalis is phylogenetically related to Jahnulales (Fig. 14). Sequence data for B. jamaicensis is necessary to shed light on its phylogenetic affinities.
List of freshwater Brachiosphaera species
Brachiosphaera jamaicensis (J.L. Crane & Dumont) Nawawi, Trans. Br. mycol. Soc. 67(2): 216 (1976)
Basionym: Actinospora jamaicensis J.L. Crane & Dumont, Can. J. Bot. 53(9): 843 (1975)
Freshwater distribution: Jamaica (Crane and Dumont 1975), China (Chang 1994), Poland (Suetrong et al. 2011a)
*Brachiosphaera tropicalis Nawawi, Trans. Br. mycol. Soc. 67(2): 213 (1976); Fig. 13c–f
Freshwater distribution: China (Chang 1994; Cai et al. 2002a), Malaysia (Nawawi and Webster 1976), Panama (Campbell et al. 2007), Peru (Shearer et al. 2015), Puerto Rico (Nieves-Rivera and Santos-Flores 2005), Thailand (Tubaki et al. 1983; Suetrong et al. 2011a), USA (Raja et al. 2009b), Venezuela (Smits et al. 2007)
Key to freshwater Brachiosphaera species
-
1.
Conidia with 4–5 arms………B. tropicalis
-
1.
Conidia with 6–10, up to 10–13 arms………B. jamaicensis
Xylomyces Goos, Brooks & Lamore, Mycologia 69(2): 282 (1977)
Saprobic on submerged wood, leaves in freshwater or rotten leaves, root in terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Colonies on natural substrate thin, effuse, reddish brown. Mycelium immersed and superficial, composed of branched, septate, fuscous hyphae. Stroma absent. Conidiophores and conidia absent. Chlamydospores abundant, broadly fusiform, brown to blackish, intercalary, solitary or catenate, occasionally branched, straight or curved, uniform in colour or sometimes end cells paler, with thick septate, distinctly constricted at the septa, thick-walled (Goos et al. 1977).
Type species: Xylomyces chlamydosporus Goos, R.D. Brooks & Lamore
Notes: The chlamydospores of Xylomyces are often found on submerged wood in freshwater habitats (Goos et al. 1977; Goh et al. 1997). The type species X. chlamydosporus was shown to belong in Aliquandostipitaceae based on molecular data (Campbell et al. 2007; Huang et al. 2018). Freshwater species X. aquaticus (Dudka) K.D. Hyde & Goh and X. elegans Goh et al. clustered in Pleosporales, therefore they were excluded from Xylomyces (Prihatini et al. 2008; Suetrong et al. 2011a; Tanaka et al. 2015). Five species are accepted in the genus, however, only X. chlamydosporus has been confirmed with molecular data. The species can be distinguished by chlamydospores size, septation and ornamentation of wall (see key below). This genus is in need of additional molecular studies to establish if other described species are phylogenetically related to X. chlamydosporus within Jahnulales (Fig. 14).
List of freshwater Xylomyces species
Xylomyces acerosisporus M.S. Oliveira, Malosso & R.F. Castañeda, Mycotaxon 130: (2015)
Freshwater distribution: Brazil (Oliveira et al. 2015)
*Xylomyces chlamydosporus Goos, R. D. Brooks & Lamore [as ‘chlamydosporis’], Mycologia 69(2): 282 (1977); Fig. 13a, b
Freshwater distribution: Australia (Hyde and Goh 1997), Brunei (Goh et al. 1997; Fryar et al. 2004), China (Luo et al. 2004), China (Goh et al. 1997; Tsui et al. 2001c), Seychelles (Hyde and Goh 1998b), USA (Goos et al. 1977; Lamore and Goos 1978; Raja et al. 2009b)
Xylomyces giganteus Goh, W.H. Ho, K.D. Hyde & K.M. Tsui, Mycol. Res. 101(11): 1324 (1997)
Freshwater distribution: Australia (Goh et al. 1997), China (Jiang et al. 2008), South Africa (Hyde et al. 1998)
Xylomyces punctatus Goh, W.H. Ho, K.D. Hyde & K.M. Tsui, Mycol. Res. 101(11): 1328 (1997)
Freshwater distribution: China (Goh et al. 1997; Tsui et al. 2001c)
Xylomyces pusillus Goh, W.H. Ho, K.D. Hyde & K.M. Tsui, Mycol. Res. 101(11): 1328 (1997)
Freshwater distribution: China (Goh et al. 1997; Tsui et al. 2001c; Cai et al. 2002a)
Key to freshwater Xylomyces species
-
1.
Chlamydospores > 25 µm wide………2
-
1.
Chlamydospores < 20 µm wide………3
-
2.
Chlamydospores 5–9-septate………X. chlamydosporis
-
2.
Chlamydospores 6–26-septate………X. giganteus
-
3.
Chlamydospores with distinct punctate wall………X. punctatus
-
3.
Chlamydospores lack distinct punctate wall………4
-
4.
Chlamydospores 42–56 × 7–11 µm………X. pusillus
-
4.
Chlamydospores 95–180 × 8–10 µm………X. acerosisporus
Kirschsteiniotheliales Hern.-Restr., R.F. Castañeda, Gené & Crous, Stud. Mycol. 86: 72 (2017)
Kirschsteiniotheliaceae Boonmee & K.D. Hyde, Mycologia 104(3): 705 (2012)
Kirschsteiniothelia D. Hawksw., J. Linn. Soc., Bot. 91: 182 (1985)
synonymy: Dendryphiopsis S. Hughes, Can. J. Bot. 31:655 (1953)
Saprobic mostly on dead wood in terrestrial or submerged wood in freshwater habitats. Sexual morph: Ascomata superficial, solitary or clustered, subglobose to globose, membranaceous, dark brown to black, with a central papilla. Peridium composed of several layers of cells of textura angularis. Pseudoparaphyses numerous, trabeculate, filiform, hyaline. Asci 8-spored, bitunicate, fissitunicate, cylindric-clavate, long pedicellate, apically rounded, with an ocular chamber. Ascospores biseriate, ellipsoidal, dull green, olive brown to dark brown at maturity, 1–2-septate, smooth-walled (Hawksworth 1985; Boonmee et al. 2012). Asexual morph: Hyphomycetous. Conidiophores macronematous, mononematous, erect, gregarious, elongate and thick-walled, straight and slightly curved, apically branched, septate, brown to dark brown, smooth-walled. Conidiogenous cells holoblastic, monoblastic, terminal, constricted at delimiting septa. Conidia broadly ellipsoid-obovoid, fusiform to obclavate, rounded at both ends, initially 1-septate, later becoming 2-septate, occasionally 3-septate, constricted and darkly pigmented at the septa, reddish brown to dark brown, grayish brown, smooth-walled (Hyde et al. 2013; Su et al. 2016b).
Type species: Kirschsteiniothelia atra (Corda) D. Hawksw.
Notes: Kirschsteiniothelia is characterized by superficial, subglobose to globose ascomata, cylindric-clavate asci and ellipsoidal, dull green, olive-brown to dark brown ascospores (Boonmee et al. 2012). The asexual morph of Kirschsteiniothelia has been connected to Dendryphiopsis, typified by D. atra (Corda) S. Hughes with molecular data (Boonmee et al. 2012; Hyde et al. 2013; Su et al. 2016b). For convenience, Wijayawardene et al. (2014) proposed to use Kirschsteiniothelia over Dendryphiopsis and named K. atra as the type species. All Kirschsteiniothelia species formed a well-supported clade and were placed in Kirschsteiniotheliaceae by Boonmee et al. (2012). Six freshwater species with molecular data have been accepted in the genus and all of which are asexual morphs (see list below). All freshwater species have unbranched conidiophores and mostly clavate conidia (slender conidia in K. fluminicola Z.L. Luo et al.), except K. aethiops (Sacc.) D. Hawksw. producing branched conidiophores and cylindrical conidia (Su et al. 2016b).
List of freshwater Kirschsteiniothelia species
*Kirschsteiniothelia aquatica Z.L. Luo, K.D. Hyde & H.Y. Su, Mycosphere 9(4): 759 (2018)
Freshwater distribution: China (Bao et al. 2018)
*Kirschsteiniothelia atra (Corda) D. Hawksw., Fungal Diversity 69:37 (2014); Fig. 15a–h
Basionym: Dendryphion atrum Corda, Icon. fung. (Prague) 4: 33 (1840)
Synonymy: Amphisphaeria aethiops Sacc., Syll. fung. (Abellini) 1: 722 (1882)
Dendryphiopsis atra (Corda) S. Hughes, Can. J. Bot. 31: 655 (1953)
Sphaeria aethiops Berk. & Curtis, Grevillea 4: 143 (1876)
Kirschsteiniothelia aethiops (Sacc.) D. Hawksw., J. Linn. Soc., Bot. 91(1 -2): 185 (1985)
Freshwater distribution: China (Su et al. 2016b)
*Kirschsteiniothelia cangshanensis Z.L. Luo, D.F. Bao, K.D. Hyde & H.Y. Su, Mycosphere 9(4): 760 (2018)
Freshwater distribution: China (Bao et al. 2018)
*Kirschsteiniothelia fluminicola Z.L. Luo, K.D. Hyde & H.Y. Su, Mycosphere 9(4): 760 (2018)
Freshwater distribution: China (Bao et al. 2018)
*Kirschsteiniothelia rostrata J Yang & K.D. Hyde, Fungal Diversity 87: 45 (2017)
Freshwater distribution: China (Bao et al. 2018), Thailand (Hyde et al. 2017)
*Kirschsteiniothelia submersa H.Y. Su & K.D. Hyde, Fungal Diversity (2016); Fig. 15i–o
Freshwater distribution: China (Su et al. 2016b)
Key to freshwater Kirschsteiniothelia species
-
1.
Conidiophores branched………K. atra
-
1.
Conidiophores unbranched………2
-
2.
Conidia slender, solitary to short-catenate………K. fluminicola
-
2.
Conidia not slender, solitary………3
-
3.
Conidia with sheath………4
-
3.
Conidia without sheath………5
-
4.
Conidia 33–43 μm long………K. cangshanensis
-
4.
Conidia 80–150 μm long………K. rostrata
-
5.
Conidiophores 114–151 × 7–8 μm………K. aquatica
-
5.
Conidiophores 220–280 × 6–7 μm………K. submersa
Minutisphaerales Raja, Oberlies, Shearer & A.N. Mill., Mycologia 107(4): 854 (2015)
Acrogenosporaceae Jayasiri & K.D. Hyde, Mycosphere 9(4): 809 (2018)
Acrogenospora M.B. Ellis, Dematiaceous Hyphomycetes (Kew): 114 (1971)
Saprobic on decaying wood, bark, culms of bamboo in freshwater or terrestrial habitats. Sexual morph: Hysterothecia laterally compressed, with a prominent sunken slit, solitary to gregarious, erect and elevated, presenting an almost stipitate appearance, thick-walled. Pseudoparaphyses branched. Asci 8-spored, cylindrical, fusoid or obovate, obtuse at the apex, short pedicellate, thin-walled. Ascospores oval, aseptate, hyaline or moderately pigmented (Mason 1941; Jayasiri et al. 2018). Asexual morph: Hyphomycetous. Colonies effuse, dark brown to black, glistening, hairy. Mycelium mostly immersed, consist of septate, thin-walled, smooth, hyaline to pale brown hyphae. Conidiophores macronematous, mononematous, solitary, erect, subulate or cylindrical, straight or slightly flexuous, pale brown to dark brown, septate, unbranched, smooth. Conidiogenous cells holoblastic, monoblastic, integrated, terminal or intercalary, with percurrent proliferations, cylindrical. Conidia solitary, dry, acrogenous, simple, spherical, subspherical, olive to brown, aseptate, truncate at the base, smooth or verrucose (Ellis 1971; Hyde et al. 2019).
Type species: Acrogenospora sphaerocephala (Berk. & Broome) M.B. Ellis
Notes: Acrogenospora is a holomorphic genus, characterized by laterally compressed hysterothecia with a prominent sunken slit, oval, aseptate, hyaline ascospores and spherical, olive to brown conidia (Hyde et al. 2019). Acrogenospora is used to suppress Farlowiella Sacc. (Rossman et al. 2015) and their sexual-asexual connections were linked based on molecular data (Jayasiri et al. 2018). Thus, Acrogenospora is the only genus in Acrogenosporaceae (Jayasiri et al. 2018; Hyde et al. 2019). The sequence data of the type species A. sphaerocephala were generated based on a freshwater collection from Thailand (Hyde et al. 2019). Bao et al. (2020) introduced seven new species collected from a small area of Yunnan Province, China, which indicated Acrogenospora is a speciose genus. 20 species were reported in Acrogenospora and 13 have been confirmed with molecular data (Bao et al. 2020). Freshwater Acrogenospora species are morphologically very similar and the sequence data are main evidence to separate them.
List of freshwater Acrogenospora species
*Acrogenospora aquatica D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Frontiers in Microbiology 11: 3 (2020)
Freshwater distribution: Yunnan, China (Bao et al. 2020)
*Acrogenospora basalicellularispora D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Frontiers in Microbiology 11: 8 (2020)
Freshwater distribution: Yunnan, China (Bao et al. 2020)
*Acrogenospora ellipsoidea D.M. Hu, L. Cai & K.D. Hyde, Sydowia 62(2): 194 (2010)
Freshwater distribution: Yunnan, China (Hu et al. 2010a)
*Acrogenospora guttulatispora D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Frontiers in Microbiology 11: 8 (2020)
Freshwater distribution: Yunnan, China (Bao et al. 2020)
*Acrogenospora obovoidspora D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Frontiers in Microbiology 11: 8 (2020)
Freshwater distribution: Yunnan, China (Bao et al. 2020)
*Acrogenospora olivaceospora D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Frontiers in Microbiology 11: 10 (2020)
Freshwater distribution: Yunnan, China (Bao et al. 2020)
Acrogenospora ovalis Goh, K.D. Hyde & C.K.M. Tsui [as ‘ovalia’], Mycol. Res. 102(11): 1312 (1998)
Freshwater distribution: Hong Kong (China) (Goh et al. 1998b)
*Acrogenospora sphaerocephala (Berk. & Broome) M.B. Ellis, Dematiaceous Hyphomycetes (Kew): 114 (1971)
Basionym: Monotospora sphaerocephala Berk. & Broome, Ann. Mag. nat. Hist., Ser. 3 3: 361 (1859)
Synonymy: Halysium sphaerocephalum (Berk. & Broome) Vuill., Bull. Séanc. Soc. Sci. Nancy, Sér. 3 11: 167 (1911)
Monosporella sphaerocephala (Berk. & Broome) S. Hughes, Can. J. Bot. 31: 654 (1953)
Monotosporella sphaerocephala (Berk. & Broome) S. Hughes, Can. J. Bot. 36: 787 (1958)
Freshwater distribution: China (Goh and Hyde 1999; Tsui et al. 2000), Philippines (Cai et al. 2003a), Seychelles (Hyde and Goh 1998b), Thailand (Sivichai et al. 2000; Hyde et al. 2019), USA (Lamore and Goos 1978; Shearer and Crane 1986)
*Acrogenospora submersa D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Frontiers in Microbiology 11: 12 (2020)
Freshwater distribution: Yunnan, China (Bao et al. 2020)
*Acrogenospora subprolata Goh, K.D. Hyde & C.K.M. Tsui, Mycol. Res. 102(11): 1314 (1998)
Freshwater distribution: Australia (Goh et al. 1998b), China (Goh et al. 1998b; Tsui et al. 2001c; Bao et al. 2020), Seychelles (Goh et al. 1998b), South Africa (Goh et al. 1998b), UK (Goh et al. 1998b)
*Acrogenospora thailandica J. Yang & K.D. Hyde, Fungal Diversity 96: 78 (2019)
Freshwater distribution: Thailand (Hyde et al. 2019)
*Acrogenospora verrucispora Hong Zhu, L. Cai & K.Q. Zhang [as ‘verrucospora’], Mycotaxon 92: 384 (2005)
Freshwater distribution: Yunnan, China (Zhu et al. 2005; Bao et al. 2020)
*Acrogenospora yunnanensis D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Frontiers in Microbiology 11: 18 (2020)
Freshwater distribution: Yunnan, China (Bao et al. 2020)
Key to freshwater Acrogenospora species
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1.
Conidiophores 850–950 × 3.5–8 µm………A. thailandica
-
1.
Conidiophores < 800 µm long………2
-
2.
Conidiophores have wide range of length, 100–730 × 7.2–10.5 µm………A. sphaerocephala
-
2.
Conidiophores not as above………3
-
3.
Conidia with a small, hyaline basal cell………4
-
3.
Conidia without basal cell………5
-
4.
Conidiophores 202–250 × 7.5–9.5 µm………A. aquatica
-
4.
Conidiophores 259–395 × 8–12 µm………A. basalicellularispora
-
5.
Conidia hyaline when young, darker when mature………6
-
5.
Conidia colour almost consistent………8
-
6.
Conidiophores 163–223 × 6.7–10 µm………A. submersa
-
6.
Conidiophores > 260 µm long………7
-
7.
Conidiophores 7.5–8.6 µm wide………A. guttulatispora
-
7.
Conidiophores 8.6–12 µm wide………A. yunnanensis
-
8.
Conidia verrucose………A. verrucispora
-
8.
Conidia smooth………9
-
9.
Conidia ellipsoidal………A. ellipsoidea
-
9.
Conidia not as above………10
-
10.
Conidia 24–33 × 18–22 µm………A. ovalia
-
10.
Conidia > 32 µm long………11
-
11.
Conidia 39–46 × 30–39 µm………A. subprolata
-
11.
Conidia < 39 µm long………12
-
12.
Conidiophores 209–277 × 7.5–10 µm………A. obovoidspora
-
12.
Conidiophores 102–172 × 5.8–9 µm………A. olivaceospora
Minutisphaeraceae Raja, Oberlies, Shearer & A.N. Mill., Mycologia 107(4): 854 (2015)
Minutisphaera Shearer, A.N. Mill. & A. Ferrer, Mycologia 103(2): 415 (2011)
Saprobic on submerged wood. Sexual morph: Ascomata scattered or clustered in groups, erumpent to superficial, uniloculate, globose to subglobose, brown, with central, rounded ostiole surrounded by black hairs. Peridium thin, composed of textura angularis to globulosa cells. Pseudoparaphyses sparse in young ascomata, becoming abundant with age, cellular, hyaline, septate, simple or branched, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, fissitunicate, ovoid to obclavate, lacking a pedicel, rounded at the apex. Ascospores irregularly arranged, clavate, mostly straight, hyaline to pale brown, 1(–3)-septate, constricted at the septum, multiguttulate, asymmetrical, smooth- or rough-walled when mature, with sheath and filamentous appendages (Ferrer et al. 2011). Asexual morph: Undetermined.
Type species: Minutisphaera fimbriatispora Shearer, A.N. Mill. & A. Ferrer
Notes: All species reported within Minutisphaera were collected from freshwater habitats (Ferrer et al. 2011; Raja et al. 2013b, 2015; Bao et al. 2019a). The ascospores of Minutisphaera are unusual in being asymmetrical and often equipped with a sheath and filamentous appendages (Ferrer et al. 2011; Raja et al. 2015). The shape and size of ascospores, and features of appendages and sheaths are used for distinguishing all species within the genus (see key below).
In the analysis of Raja et al. (2015) BLAST search of ITS sequences revealed that two isolates, Pleosporales sp. 39g (JX244063) and Didymosphaeria sp. TS_04_050 (HQ713763), shared 99% similarity with Minutisphaera aspera. Both strains were isolated as fungal endophytes in previous studies (Grünig et al. 2011). Thus, it was hypothesized that members of Minutisphaerales may lead a dual life as saprobes on submerged wood and as fungal endophytes of trees living in close proximity to rivers and streams. However, additional studies are needed to shed light on the dual ecological life style of Minutisphaera spp.
List of freshwater Minutisphaera species
*Minutisphaera aquaticum D.F. Bao, L. Xu & H.Y. Su, Asian Journal of Mycology 2(1): 309 (2019)
Freshwater distribution: Thailand (Bao et al. 2019a)
*Minutisphaera aspera Raja, Oberlies, Shearer & A.N. Mill, Mycologia 107(4): 854 (2015); Fig. 16a–c
Freshwater distribution: USA (Raja et al. 2015)
*Minutisphaera fimbriatispora Shearer, A.N. Mill. & A. Ferrer, Mycologia 103(2): 415 (2011)
Freshwater distribution: USA (Ferrer et al. 2011; Raja et al. 2013b)
*Minutisphaera japonica Kaz. Tanaka, Raja & Shearer, Mycologia 105(4): 966, (2013); Fig. 17
Freshwater distribution: Japan (Raja et al. 2013b), France (Raja et al. 2015)
*Minutisphaera parafimbriatispora Raja, Oberlies, Shearer & A.N. Mill, Mycologia 107(4): 855 (2015); Fig. 16d–f
Freshwater distribution: USA (Raja et al. 2015)
Key to freshwater Minutisphaera species
-
1.
Ascospores with sheath, but lacking appendages………2
-
1.
Ascospores with sheath and appendages………4
-
2.
Ascospores with rough-walled………M. aspera
-
2.
Ascospores smoth-walled………3
-
3.
Ascospores broadly fusiform, with acute apex………M. japonica
-
3.
Ascospores fusiform to clavate, with rounded apex………M. aquaticum
-
4.
Ascospores 24–36 × 6–8 µm………M. fimbriatispora
-
4.
Ascospores 18–25 × 4–7 µm………M. parafimbriatispora
Natipusillales Raja, Shearer, A.N. Mill. & K.D. Hyde, Fungal Diversity 63: 9 (2013)
Natipusillaceae Raja, Shearer & A.N. Mill., Mycologia 104(2): 570 (2012)
Natipusilla A. Ferrer, A.N. Mill. & Shearer, Mycologia 103(2): 417 (2011)
Saprobic on submerged wood. Sexual morph: Ascomata scattered or aggregated, erumpent to superficial, uniloculate, globose to subglobose, hyaline to brown, lacking ostioles, occasionally with minute papilla. Peridium thin, membranous, glabrous, forming a textura angularis in surface view. Pseudoparaphyses sparse or absent. Asci 8-spored, bitunicate, fissitunicate, globose to obclavate, lacking a pedicel, with or without an ocular chamber. Ascospores overlapping tri- to multi-seriate, arranged in a group, fusiform or clavate, straight, the upper cell often shorter and broader than the lower one, mostly 1-septate, hyaline, occasionally becoming 3-septate, pale brown at age, guttulate when young, smooth, thin-walled, with or without a gelatinous sheath (Ferrer et al. 2011). Asexual morph: Undetermined.
Type species: Natipusilla decorospora A. Ferrer, A.N. Mill. & Shearer
Notes: All species described in this genus were reported from freshwater habitats in tropical and subtropical regions (Ferrer et al. 2011; Raja et al. 2012). Phylogenetic analysis using combined SSU and LSU sequence dataset placed this genus in a distinct clade within Dothideomycetes. Therefore, a novel family, Natipusillaceae (Raja et al. 2012), and new order Natipusillales (Hyde et al. 2013) were established for Natipusilla.
Ascominuta Ranghoo & K.D. Hyde was thought to be an earlier name of Natipusilla (Hyde et al. 2013) due to the bitunicate, globose asci, sheathed ascospores and freshwater habitat (Ranghoo and Hyde 1999; Hu et al. 2010a; Ferrer et al. 2011; Raja et al. 2012). However, Ascominuta differs from Natipusilla in the numbers of ascospores per asci (4 vs. 8) and colour of ascomata (hyaline to brown vs. dark brown to black). Only LSU sequence (AF132335) of A. lignicola Ranghoo & K.D. Hyde (generic type) was deposited in Genbank, and it cannot be aligned with Natipusilla. Further molecular and morphological data are needed to clarify these two genera (Raja et al. 2012). All Natipusilla species are surrounded by a complex gelatinous sheath, except N. naponensis A. Ferrer et al. lacks a sheath (Ferrer et al. 2011; Raja et al. 2012).
List of freshwater Natipusilla species
*Natipusilla decorospora A. Ferrer et al., Mycologia 103(2): 417 (2011)
Freshwater distribution: Ecuador (Ferrer et al. 2011)
*Natipusilla limonensis A. Ferrer, A.N. Mill. & Shearer, Mycologia 103(2): 417 (2011); Fig. 18
Freshwater distribution: Costa Rica (Ferrer et al. 2011), Peru (Shearer et al. 2015)
*Natipusilla naponensis A. Ferrer, A.N. Mill. & Shearer, Mycologia 103(2): 420 (2011)
Freshwater distribution: Ecuador (Ferrer et al. 2011)
*Natipusilla bellaspora Raja, Shearer & A.N. Mill., Mycologia 104(2): 570 (2012)
Freshwater distribution: Peru (Raja et al. 2012; Shearer et al. 2015)
Key to freshwater Natipusilla species
-
1.
Ascospores without sheath………N. naponensis
-
1.
Ascospores with complex gelatinous sheaths………2
-
2.
Ascospores 40–48 × 10–13 µm………N. bellaspora
-
2.
Ascospores < 40 µm long………3
-
3.
Ascospores 30–37 × 6–9 µm, with a single scythe shaped appendage at the apex………N. decrospora
-
3.
Ascospores 35–40 × 9–11 µm, without appendage………N. limonensis
Pleosporales Luttrell ex M.E. Barr
Acrocalymmaceae Crous & Trakun., IMA Fungus 5(2): 404 (2014)
Acrocalymma Alcorn & J.A.G. Irwin, Trans. Br. mycol. Soc. 88(2): 163 (1987)
Saprobic on submerged wood, leaf litter or other plants. Sexual morph: (from culture) Ascomata scattered, erumpent becoming superficial, uniloculate, globose, covered with light gray, gnarled, warted hairs, black, coriaceous, with ostiolate papilla. Neck central, terete, composed of 2–5 layers of brown, polygonal cells around ostiole with hyaline periphyses. Peridium thin, composed of polygonal, brown, pseudoparenchyma cells. Pseudoparaphyses numerous, septate, anastomosing. Asci bitunicate, 8-spored, cylindrical, short pedicellate, apically rounded, with an distinct ocular chamber. Ascospores uni- to bi-seriate, narrowly fusiform, straight or slightly curved, hyaline first, pale reddish brown with lighter coloured end cells, 1–3-septate, constricted at first submedian septum, basically symmetrical, smooth to rough-walled, thin-walled, with 4 guttules, with a thin sheath (Shoemaker et al. 1991). Asexual morph: Coelomycetous. Pycnidia scattered or aggregated, semi-immersed to superficial, unilocular, globose, brown to black, with ostiolate papilla or rostrate. Conidiophores reduced. Conidiogenous cells holoblastic, determinate, discrete, cylindrical, lageniform to ampulliform, hyaline, smooth. Conidia cylindrical to fusoid with subobtuse apex, straight, hyaline at first, becoming pigmented with age, 0–3-septate, not constricted at septa, smooth, thin-walled, with or without helmet-shaped appendages (Zhang et al. 2012a).
Type species: Acrocalymma medicaginis Alcorn & J.A.G. Irwin
Notes: Acrocalymma is well-studied because all species have sequences in GenBank. Acrocalymma species are easy to produce pycnidia in culture (Trakunyingcharoen et al. 2014). The sexual morph was linked to Massarina walkeri Shoemaker et al. which formed in the pure culture of Acrocalymma medicaginis (Shoemaker et al. 1991). However, these two species are phylogenetically distinct (Trakunyingcharoen et al. 2014). Therefore, Trakunyingcharoen et al. (2014) transferred M. walkeri to Acrocalymma and treated A. medicaginis and A. walkeri as distinct species. The type material of A. medicaginis was re-examined and described by Li et al. (2020). Acrocalymma aquatica is the first species reported from freshwater habitats, and it is characterized by cylindrical to fusoid, 0(–1)-septate conidia with an apical, mucilaginous, helmet-shaped appendage (Zhang et al. 2012a). In this study, we report a new freshwater species A. bipolare, which is collected from Egypt.
List of freshwater Acrocalymma species
*Acrocalymma aquatica H. Zhang & K.D. Hyde, Cryptog. Mycol. 33(3): 337 (2012); Fig. 19
Freshwater distribution: Thailand (Zhang et al. 2012a)
*Acrocalymma bipolare Abdel-Aziz & Abdel-Wahab, sp. nov.
Index Fungorum number: IF557901; Facesoffungi number: FoF09243; Fig. 20
Etymology: in reference to the polar mucoid appendages of the conidia
Holotype: CBS H-22673
Saprobic on submerged wood in freshwater habitats. Sexual morph: Undetermined. Asexual morph: Pycnidia 175–230 µm diam., globose or subglobose, erumpent to superficial, solitary, dark brown to black, without ostiolate papilla. Peridium 8–17 µm thick, composed of 8–11 layers of dark brown to black, thick walled, melanized cells of textura angularis, inwardly with narrow lumens, hyaline and thin walled cells. Conidiophores reduced to conidiogenous cells. Conidiogenous cells 2.5–7 × 2–3.5 μm, holoblastic, determinate, discrete, cylindrical or lageniform, hyaline, formed from the inner cells of the pycnidial wall. Conidia 9–12 × 3–5 µm (\( {\bar{\text{x}}} \) = 10.8 × 4.3, n = 50), cylindrical to fusiform, straight, unicellular, hyaline, thin-walled, guttulate, with rounded apex and slightly narrow, truncate base, with mucoid polar appendages that filled with oil droplets, appendages elongate in water to form filaments. Apical appendages 4–6 μm diam., rounded. Lower appendages 1–2 μm in length, sometimes split in the middle.
Culture characteristics: Colonies on PDA up to 22 mm diam. after 2 weeks at 23 °C, with grey to dark brown aerial and immersed mycelium; reverse dark brown.
Material examined: EGYPT, Sohag City, River Nile, 26°33′32ʺN, 31°41′44ʺE, on decaying wood submerged in River Nile water, 14 August 2012, F.A. Abdel-Aziz, (CBS H-22673, holotype), ex-type living culture MD1321.
Notes: Acrocalymma bipolare clusters with the type species A. medicaginis and A. pterocarpi Jayasiri et al. with high bootstrap support (Fig. 2). Morphologically, Acrocalymma bipolare is different from A. medicaginis by its appendages that are filled with oil droplets and become filaments when mounted in water, while A. medicaginis processes globose to hemispherical or helmet-shaped appendages which do not form filaments in water (Alcorn and Irwin 1987). In addition, A. bipolare has shorter conidia than A. medicaginis (9–12 × 3–5 µm vs. 11–21 × 3.5–5 µm). The phylogenetically close species A. pterocarpi did not produce asexual morph in culture, thus their morphology can not be compared (Jayasiri et al. 2019).
Acrocalymma bipolare only has LSU sequence data, and it has four and six nucleotide differences with A. medicaginis and A. pterocarpi, respectively, which indicates them to be different species. This is also supported by our phylogenetic analysis (Fig. 2).
Acrocalymma bipolare differs from the other freshwater species A. aquatica in having shorter conidia (9–12 × 3–5 μm vs. 12–17 × 3–4 μm) and bipolar appendages compared with a single appendage in A. aquatica (Zhang et al. 2012a).
Key to freshwater Acrocalymma species
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1.
Conidia 12–17 × 3–4 μm, with a single, helmet-shaped appendage………A. aquatica
-
1.
Conidia 9–12 × 3–5 μm, with bipolar appendages filled with oil droplets, appendages elongate in water to form filaments………A. bipolare
Aigialaceae Suetrong, Sakay., E.B.G. Jones, Kohlm., Volkm.-Kohlm. & C.L. Schoch, Stud. Mycol. 64: 166 (2009)
Key to freshwater genera of Aigialaceae
-
1.
Asci cylindro-clavate, ascospores often hyaline, smooth………Fissuroma
-
1.
Asci obclavate, ascospores often brown, verrucose………Neoastrosphaeriella
Fissuroma J.K. Liu, Phook., E.B.G. Jones & K.D. Hyde, Fungal Diversity 51(1): 145 (2011)
Saprobic on submerged wood, dead stem of bamboo or other plant materials. Sexual morph: Ascomata scattered, rarely clustered, solitary to gregarious, immersed beneath host epidermis, becoming raised, uniloculate, rarely biloculate joined at the base, hemispherical domes, glabrous, black, coriaceous or carbonaceous, opening with a slit-like ostiole. Peridium thick, uneven in thickness, poorly developed at the base, thick at sides towards the apex, composed of dark brown pseudoparenchymatous cells, with host cells, plus fungal tissue, arranged in a textura angularis to textura epidermoidea, carbonaceous at slit-like opening. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, embedded in a gelatinous matrix and anastomosing between and above the asci. Asci 8-spored, bitunicate, fissitunicate, obclavate to cylindrical, pedicellate, apically rounded, with a small ocular chamber. Ascospores overlapping uni- to tri-seriate, fusiform, straight to slightly curved, hyaline, 1-septate, slightly constricted at the septum, smooth, thin-walled, surrounded by a mucilaginous sheath (Liu et al. 2011). Asexual morph: Coelomycetous, reported as pleurophomopsis-like from culture of Fissuroma aggregata (KT 767). Conidiomata globose to subglobose. Conidiophores cylindrical, simple to branched, septate. Conidiogenous cells phialidic. Conidia globose, hyaline (Tanaka and Harada 2005).
Type species: Fissuroma maculans (Rehm) J.K. Liu, E.B.G. Jones & K.D. Hyde
Notes: Fissuroma comprises 12 species in Index Fungorum (2020). Eight species have been confirmed with molecular data (Liu et al. 2011; Phookamsak et al. 2015b; Tennakoon et al. 2018; Wanasinghe et al. 2018a). However, Phookamsak et al. (2015b) indicated that F. aggregata (I. Hino & Katum.) Phook. et al. is a species complex which might comprise at least three distinct species based on their phylogenetic analyses. After re-examination of the holotype specimen of F. aggregata (≡ Melanopsamma aggregata), Phookamsak et al. (2015b) considered the collection MFLU 11-0146 of Liu et al. (2011) as a distinct species from F. aggregata. Therefore, F. neoaggregatum Phook. & K.D. Hyde was introduced based on the specimen MFLU 11-0146 (Phookamsak et al. 2015b). The asexual morph was developed in the culture of F. aggregata (KT 767) (Tanaka and Harada 2005). However, the real identity of KT 767 needs confirmation to separate F. aggregata KT 984, as shown in the phylogenetic tree (Fig. 2). We provide a description and illustration for F. neoaggregatum collected from submerged wood in Thailand.
List of freshwater Fissuroma species
*Fissuroma neoaggregatum Phook. & K.D. Hyde [as ‘neoaggregata’], Fungal Diversity 74: 158 (2015); Fig. 21
Freshwater distribution: Thailand (this study)
Saprobic on submerged wood. Sexual morph: Ascostromata dark brown to black, solitary to gregarious, immersed in host epidermis, visible as raised, dome-shaped areas on the host surface, hemisphaerical to depressed conical, with flattened base, uniloculate, coriaceous, ostiolate, with slit-like opening. Peridium of unequal thickness, poorly developed at the base. Pseudoparaphyses dense, trabeculate, filiform, embedded in a hyaline gelatinous matrix. Asci 140–155 × 16–21 μm (\( {\bar{\text{x}}} \) = 149 × 19 μm, n = 5), 8-spored, bitunicate, obclavate, with furcate to truncate pedicel, apically rounded, with an ocular chamber. Ascospores 36–43 × 6–8 μm (\( {\bar{\text{x}}} \) = 40.5 × 7 μm, n = 10), overlapping biseriate and uniseriate at the apex, hyaline, fusiform, with acute ends, 1-septate, constricted at the septum, smooth-walled, guttulate, surrounded by a gelatinous sheath. Asexual morph: Undetermined.
Material examined: THAILAND, Chiang Rai Province, on submerged wood, 18 January 2010, H. Zhang, a45 (MFLU 11-1140), living culture MFLUCC 10-0917.
Notes: Our new collection MFLUCC 10-0917 is identified as Fissuroma neoaggregatum based on nearly identical ITS sequence data with ex-type strain MFLUCC 10-0554 (two nucleotide differences) and morphological characters. Our collection has shorter asci (140–155 × 16–21 μm vs. 155–197 × 15–18) μm) and ascospores (36–43 × 6–8 μm vs. 39–54 × 7–9 μm) than the holotype (Phookamsak et al. 2015b). Moreover, our collection shows a broad, mucilaginous sheath in Indian Ink, while the holotype has only a thin sheath (Phookamsak et al. 2015b). Other sequences are expected for MFLUCC 10-0917 to further clarify this species. This is a new habitat record for F. neoaggregatum from freshwater.
Neoastrosphaeriella J.K. Liu, E.B.G. Jones & K.D. Hyde, Fungal Diversity 51(1): 148 (2011)
Saprobic on decaying twigs, petiole and submerged wood in terrestrial and freshwater habitats. Sexual morph: Ascomata scattered, immersed to semi-immersed, with a slit-like ostiole, black. Peridium uneven in thickness, carbonaceous, composed of dark brown, thick-walled cells. Pseudoparaphyses trabeculate, hyaline, anastomosing, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, fissitunicate, obclavate to cylindrical, pedicellate, with a small ocular chamber. Ascospores fusiform, hyaline to dark brown, mostly verrucose when mature, 1-septate, surrounded by a mucilaginous sheath (Liu et al. 2011). Asexual morph: Undetermined.
Type species: Neoastrosphaeriella krabiensis J.K. Liu, E.B.G. Jones & K.D. Hyde
Notes: Neoastrosphaeriella was established by Liu et al. (2011) to accommodate species having ascomata with slit-like ostioles, obclavate asci and brown, verrucose ascospores. Neoastrosphaeriella aquatica D.F. Bao et al. was the only species found in freshwater habitats and differed from the others by hyaline to greyish brown, verrucose ascospores and distinct molecular characters (Bao et al. 2019b). Neoastrosphaeriella nested well in Aigialaceae (Liu et al. 2011; Wanasinghe et al. 2018a; Bao et al. 2019b; Zhang et al. 2020; this study, Fig. 2).
List of freshwater Neoastrosphaeriella species
*Neoastrosphaeriella aquatica D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Phytotaxa 391(3): 201 (2019)
Freshwater distribution: Thailand (Bao et al. 2019b)
Amniculicolaceae Y. Zhang ter, C.L. Schoch, J. Fourn., Crous & K.D. Hyde, Stud. Mycol. 64: 95 (2009)
Key to freshwater genera of Amniculicolaceae
-
1.
Asexual morph………Vargamyces
-
1.
Sexual morph………2
-
2.
Ascospores hyaline, 1-septate………Amniculicola
-
2.
Ascospores pigmented, multi-septate………3
-
3.
Ascospores golden yellow to brown, dictyoseptate………Murispora
-
3.
Ascospores reddish brown, phragmoseptate………Neomassariosphaeria
Amniculicola Y. Zhang ter & K.D. Hyde, Mycological Research 112 (10): 1189 (2008)
Saprobic on submerged wood or in plant humus. Sexual morph: Ascomata solitary to gregarious, immersed to nearly superficial, black, uniloculate, subglobose to conical, glabrous, ostiolate, with or without two tuberculate flared lips surrounding a slit-like ostiole, sometimes with a flattened base not easily removed from the substrate, usually staining the woody substrate purple. Peridium 2-layered, outer layer composed of heavily pigmented thick-walled cells of textura angularis, inner layer composed of hyaline thin-walled cells of textura angularis. Pseudoparaphyses dense, trabeculate, filiform, persistent, hyaline, embedded in mucilage, anastomosing between and above the asci. Asci 8-spored, bitunicate, fissitunicate, cylindrical to narrowly fusoid, short pedicellate. Ascospores mostly uniseriate, fusoid, hyaline, septate, symmetrical, smooth, thin-walled, surrounded by a hyaline, gelatinous sheath (Zhang et al. 2008c, 2009b, 2012b). Asexual morph: Hyphomycetous. Conidiophores usually simple. Conidia curved or sigmoid, tapering to the end, septate, hyaline (illustration and description see Ingold (1942)).
Type species: Amniculicola lignicola Y. Zhang ter & K.D. Hyde
Notes: The freshwater genus Amniculicola is characterized by staining the woody substrate purple (Zhang et al. 2008c, 2009b). However, two other species, A. aquatica Z.L. Luo et al. and A. guttulata et al., did not produce pigmentation on the host substrate (Hyde et al. 2019; this study, Fig. 22). A comprehensive account of Amniculicola was provided by Zhang et al. (2008c, 2012b). Amniculicola immersa Y. Zhang ter, J. Fourn., A. lignicola and A. parva Y. Zhang ter, J. Fourn. were collected from Europe (Denmark and France), A. longissima (Sacc. & P. Syd.) Nadeeshan & K.D. Hyde was collected from Latin America (Costa Rica), while A. aquatica and A. guttulata were collected from Asia (China). Amniculicola longissima is the only asexual morphic species in the genus and confirmed by phylogenetic analyses (Hyde et al. 2019; this study, Fig. 2).
The paraphyletic nature of Amniculicola was shown in Wanasinghe et al. (2015), as Amniculicola species clustered in three different sister clades. This nature is not well resolved as one asexual genus Vargamyces Tóth nested within Amniculicola in Hyde et al. (2019) and this study (Fig. 2).
List of freshwater Amniculicola species
*Amniculicola aquatica Z.L. Luo, K.D. Hyde & H.Y. Su, Fungal Diversity 96: 13 (2019)
Freshwater distribution: China (Hyde et al. 2019)
*Amniculicola guttulata Z.L. Luo, K.D. Hyde & H.Y. Su, Fungal Diversity 96: 13 (2019); Fig. 22
Freshwater distribution: China (Hyde et al. 2019, this study)
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 160–180 μm high, 170–190 μm diam., black, solitary, scattered or occasionally gregarious, superficial, subglobose to conical, with ostiolate papilla. Peridium 35–45 μm thick, comprising several layers of hyaline to pale brown, thin-walled, large cells of textura angularis or irregular cells. Pseudoparaphyses 2.2 μm diam., dense, trabeculate, filiform, persistent, hyaline, embedded in mucilage, anastomosing between and above the asci. Asci 105–141(–256) × 8.5–10.5 μm (\( {\bar{\text{x}}} \) = 158.5 × 10 μm, n = 10), 8-spored, bitunicate, fissitunicate, cylindrical to narrowly fusiform, with a twisted, bifurcate, short pedicel, 7.5–18.5 μm long, apically rounded or slightly obtuse, endoascus elongate to 256 μm long when mature, with a small inconspicuous apical apparatus barely seen in water. Ascospores 21.5–27 × 5.2–6.2 μm (\( {\bar{\text{x}}} \) = 23.7 × 5.6 μm, n = 15), uni-seriate or overlapping uni-seriate, straight or slightly curved, hyaline, 1-septate, obscure when young, visible when germinated, deeply constricted at the septa, slightly constricted at a quarter, the upper cell slightly broader than the lower one, broadly fusiform, with two prominent big guttules in the middle cell and four gradually smaller ones beside, thin-walled, smooth, with a thin, hyaline, bipolar narrowed, mucilaginous sheath which is 1–2 μm thick. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 25 mm diam. in 25 days at 25 °C, grey to white from above, pale grey from below, surface rough, fluffy, with dense mycelium, dry, raised, edge entire, with white margin.
Material examined: CHINA, Yunnan Province, Dehong, on submerged wood in a stream, 25 November 2017, G.N. Wang, H55A-1 (MFLU 18-1160), living culture MFLUCC 18-1038; ibid., H55A-2 (HKAS 101736), living culture KUMCC 18-0088.
Notes: Our new collection MFLUCC 18-1038 is identified as Amniculicola guttulata based on morphological characters; identical LSU and TEF sequence data and phylogenetic analysis (Fig. 2). The asci in the holotype are up to 127 μm long, while in our collection they are up to 256 μm long when mature (Hyde et al. 2019).
*Amniculicola immersa Y. Zhang ter, J. Fourn., Crous & K.D. Hyde, Persoonia 23: 50 (2009)
Freshwater distribution: Denmark (Zhang et al. 2009b)
*Amniculicola lignicola Y. Zhang ter & K.D. Hyde, Mycological Research 112 (10): 1189 (2008)
Freshwater distribution: France (Zhang et al. 2008c)
*Amniculicola longissima (Sacc. & P. Syd.) Nadeeshan & K.D. Hyde, IMA Fungus 7(2): 301 (2016)
Freshwater distribution: Leicester, UK (Ingold 1942)
*Amniculicola parva Y. Zhang ter, J. Fourn., Crous & K.D. Hyde, Persoonia 23: 52 (2009)
Freshwater distribution: France (Zhang et al. 2009b)
Key to freshwater Amniculicola species
-
1.
Asexual morph………A. longissima
-
1.
Sexual morph………2
-
2.
Ascomata superficial………3
-
2.
Ascomata immersed………A. immersa
-
3.
Asci longer than 130 μm………A. lignicola
-
3.
Asci shorter than 130 μm………4
-
4.
Substrate stained purple………A. parva
-
4.
Substrate natural colour………5
-
5.
Peridium 35–50 µm thick, ascospores 24–32 × 6–8 µm………A. aquatica
-
5.
Peridium 27–35 µm thick, ascospores 23–27 × 5–7 µm………A. guttulata
Murispora Yin. Zhang, C.L. Schoch, J. Fourn., Crous & K.D. Hyde, Studies in Mycology 64: 95 (2009)
Saprobic on submerged wood or dead stems or branches of plant materials. Sexual morph: Ascomata scattered to gregarious, immersed, uniloculate, lenticular, slightly protruding at the apex, opening through a small rounded pore, with ostiolate papilla, stain substrate purple. Peridium thin, composed of a few layers cells of textura angularis, thicker at the apex with pseudoparenchymatous cells. Pseudoparaphyses cellular, embedded in mucilage. Asci 8-spored, bitunicate, fissitunicate, cylindro-clavate, short pedicellate. with a small ocular chamber. Ascospores biseriate to uniseriate near the base, fusoid with narrowly rounded ends, slightly curved, golden yellow or hyaline, turning brown when senescent, muriform, with one, rarely two longitudinal septa in all cells except end cells, 7–9-transversally septate, basically symmetrical, smooth or finely verruculose, surrounded by a wide mucilaginous sheath (Zhang et al. 2009c, 2012b). Asexual morph: Coelomycetous. Pycnidia solitary, mainly immersed, uniloculate, dark brown to black. Peridium reddish brown cells of textura angularis, with inner most layer thin, hyaline. Conidiophores reduced to conidiogenous cells. Conidiogenous cells phialidic, determinate, hyaline, smooth, formed from the inner most layer of pycnidium wall. Conidia ellipsoidal, hyaline, aseptate, smooth-walled, thin-walled (Wanasinghe et al. 2015).
Type species: Murispora rubicunda (Niessl) Y. Zhang ter, J. Fourn. & K.D. Hyde
Notes: Zhang et al. (2009c) introduced Murispora based on Pleospora rubicunda Niessl which clustered in a robust clade with Amniculicola species in Amniculicolaceae. Wanasinghe et al. (2015) introduced another six species to Murispora from terrestrial habitats and they found the asexual morph of M. hawksworthii Wanas. et al. from single ascospore isolates. Murispora species stain substrate purple (Zhang et al. 2009c, 2012b; Wanasinghe et al. 2015; Bao et al. 2019d) and this character should be a common feature to the genus. Four freshwater species have been reported in Murispora, three of which were collected from China (see list below).
List of freshwater Murispora species
*Murispora aquatica D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Phytotaxa 416(1): 5 (2019)
Freshwater distribution: China (Bao et al. 2019d)
*Murispora cicognanii Wanas., Camporesi, E.B.G. Jones & K.D. Hyde, Cryptog. Mycol. 36(4): 437 (2015)
Freshwater distribution: China (Hyde et al. 2019)
*Murispora fagicola Wanas., Camporesi, E.B.G. Jones & K.D. Hyde, Cryptog. Mycol. 36(4): 429 (2015)
Freshwater distribution: China (Bao et al. 2019d)
*Murispora rubicunda (Niessl) Yin. Zhang, J. Fourn. & K.D. Hyde, Studies in Mycology 64: 96 (2009); Fig. 23
Basionym: Pleospora rubicunda Niessl, Verh. nat. Ver. Brünn 14: 191 (1876)
Synonymy: Sphaeria rubicunda Schwein., Transactions of the American Philosophical Society 4 (2): 222 (1832)
Massariosphaeria rubicunda (Niessl) Crivelli, Über die heterogene Ascomycetengattung Pleospora Rabh.: 144 (1983)
Karstenula rubicunda (Niessl) M.E. Barr, N. Amer. Fl., Ser. 2 (New York) 13: 52 (1990)
Freshwater distribution: Austria (Magnes and Hafellner 1991), France (Zhang et al. 2012b)
Key to freshwater Murispora species
-
1.
Ascospores > 31 μm long………2
-
1.
Ascospores < 31 μm long………3
-
2.
Ascospores more than 10 transverse septa………M. cicognanii
-
2.
Ascospores 7–9 transverse septa………M. rubicunda
-
3.
Ascospores 21–25 × 8–10 μm………M. aquatica
-
3.
Ascospores 27–31 × 11–13 μm………M. fagicola
Neomassariosphaeria Y. Zhang ter, J. Fourn. & K.D. Hyde, Stud. Mycol. 64: 96 (2009)
Saprobic on submerged culm of Phragmites. Sexual morph: Ascomata scattered or in small groups, deeply immersed, lenticular or depressed ellipsoidal, with ostiolate papilla, stain substrate purple, visible as black, slit-like spot on the surface of substrate. Peridium comprising several layers of rounded to angular, brown to dark brown, thick-walled cells. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, embedded in a matrix. Asci 8-spored, bitunicate, fissitunicate, cylindro-clavate to broadly clavate, with an ocular chamber and short pedicel. Ascospores bi- to tri-seriate, narrowly to broadly fusoid, straight or curved, multi-septate, reddish brown, minutely verruculose, usually with a thin gelatinous sheath. Asexual morph: Undetermined.
Type species: Neomassariosphaeria typhicola Y. Zhang ter, J. Fourn. & K.D. Hyde
Notes: Neomassariosphaeria was established in Amniculicolaceae to accommodate Massariosphaeria typhicola (P. Karst.) Leuchtm (Zhang et al. 2009c). Later, it was transferred to Lindgomycetaceae based on phylogenetic analysis (Ariyawansa et al. 2015). However, we found that CBS 123126 is a problematic strain, which possesses two different LSU sequences and clusters in different families, i.e. FJ795504 (Zhang et al. 2009c) in Lindgomycetaceae and GU301844 (Schoch et al. 2009) in Amniculicolaceae. We substantiate GU301844 is the real sequence of Neomassariosphaeria typhicola (P. Karst.) Y. Zhang ter et al., while FJ795504, listed in Zhang et al. (2009c), is invalid (pers. comm. Zhang Y.). Ariyawansa et al. (2015) only included the invalid sequence FJ795504 in their phylognetic tree, which resulted in the classification of Neomassariosphaeria in Lindgomycetaceae.
Neomassariosphaeria often stains the woody substrate purple, and has reddish brown, multi-septate ascospores with an irregular, hyaline, gelatinous sheath, which morphologically fit well with the familial concept of Amniculicolaceae (Zhang et al. 2009c; Hyde et al. 2013). Based on morphology and our phylogenetic tree (Fig. 2), we follow Zhang et al. (2009c), to retain Neomassariosphaeria in Amniculicolaceae. Accession number FJ795504 bearing CBS123126 is treated as an invalid sequence.
Neomassariosphaeria typhicola (IFRD 2018) was considered as a synonym of Massariosphaeria typhicola (Zhang et al. 2009c). Although they are similar in the ascomata that staining the substrate purple, re-examination of IFRD 2018 (Fig. 24) shows that it is different from M. typhicola in having lenticular ascomata with an elongate papilla on the substrate, dark brown to black, reddish brown ascospores (Leuchtmann 1984). Phylogeny also placed them in different families, i.e. N. typhicola in Amniculicolaceae, M. typhicola in Lindgomycetaceae (Zhang et al. 2009c; this study, Fig. 2). We therefore, treat Neomassariosphaeria typhicola and Massariosphaeria typhicola as different species in this study.
List of freshwater Neomassariosphaeria species
*Neomassariosphaeria typhicola Y. Zhang ter, J. Fourn. & K.D. Hyde, Stud. Mycol. 64: 96 (2009)
Facesoffungi number: FoF09244; Fig. 24
Saprobic on submerged culm of Phragmites. Sexual morph: Ascomata 150–250 μm high, 300–500 μm diam., scattered or gregarious, immersed, lenticular or depressed ellipsoidal, with ostiolate papilla, stain the substrate purple, visible as a black, slightly protruding elongate papilla on the substrate. Peridium 20–35 μm thick, comprising several layers of rounded to angular, brown to dark brown, thick-walled cells. Pseudoparaphyses 1–2 μm wide, numerous, uneven in width or tuberculed, trabeculate, hyaline, septate, embedded in hyaline to reddish matrix. Asci 90–120 × 14–20 μm (\( {\bar{\text{x}}} \) = 97 × 16.5 μm, n = 10), 8-spored, bitunicate, fissitunicate, cylindro-clavate to broadly clavate, apically rounded, with a well-developed ocular chamber and short pedicel. Ascospores 30–40 × 6–8 μm (\( {\bar{\text{x}}} \) = 34.5 × 6.5 μm, n = 20), bi- to tri-seriate, narrowly to broadly fusoid, with subacute or rounded ends, straight or curved, 7-septate, constricted at the septa, dark brown to black or reddish brown, minutely verruculose, somewhat thick-walled, usually with a thin, broadly fusoid or irregular, gelatinous sheath. Asexual morph: Undetermined.
Material examined: DENMARK, Sjaeland, Frederikskilde, Suserup Skove, Tystrup Lake, on submerged culm of Phragmites, 25 May 2007, leg. & det. J. Fournier (IFRD 2018).
Notes: We re-examined the specimen Neomassariosphaeria typhicola IFRD 2018 collected by Zhang et al. (2009c) to confirm its generic placement in Amniculicolaceae. The sequence data (LSU: GU301844, SSU: GU296174, RPB2: GU371795) and morphological characters of N. typhicola support it as a distinct genus in Amniculicolaceae. The reddish brown, phragmoseptate ascospores of Neomassariosphaeria differs from hyaline, 1-septate ascospores of Amniculicola and golden yellow to brown, dictyoseptate ascospores of Murispora (see key to freshwater genera of Amniculicolaceae).
Vargamyces Tóth, Acta bot. hung. 25: 403 (1980) [1979]
Saprobic on submerged wood or leaves. Sexual morph: Undetermined. Asexual morph: Mycelium mostly immersed, composed of septate, hyaline to pale brown, smooth hyphae. Conidiophores micronematous to semi-macronematous, solitary, erect, straight to flexuous, cylindrical, subhyaline to pale brown, with percurrent proliferations. Conidiogenous cells integrated, terminal, cylindrical to cupuliforme, hyaline to pale brown. Conidia solitary, fusiform, truncate at the base, apically rounded, paler toward the ends, multi-septate, smooth-walled. Microconidia blastic growing on undifferentiated hyphae, solitary, terminal, lateral or intercalary, globose to obovoid, unicellular, hyaline, smooth (Hernández-Restrepo et al. 2017).
Type species: Vargamyces aquaticus (Dudka) Tóth
Notes: The monotypic genus Vargamyces was introduced by Tóth (1979) to accommodate V. aquaticus which was collected from submerged leaves and wood (Dudka 1966; Hyde and Goh 1999a). Vargamyces aquaticus was transferred to Xylomyces based on detachable, fusiform, dematiaceous and multiseptate chlamydospores (Hyde and Goh 1999a). However, Hernández-Restrepo et al. (2017) showed that V. aquaticus clustered in Amniculicolaceae, which is phylogenetically distant from the type species of Xylomyces, X. chlamydosporus (this study, Fig. 2). Therefore, Vargamyces is distinct and the only asexual genus in Amniculicolaceae, as listed in Wijayawardene et al. (2018, 2020). The lectotype (Fig. 1 in Dudka (1966)) and epitype (CBS H-22992, culture ex-epitype CBS 636.91) were also designated by Hernández-Restrepo et al. (2017).
List of freshwater Vargamyces species
*Vargamyces aquaticus (Dudka) Tóth, Acta Mus. Silesiae, Ser. A 25(3–4): 403 (1980) [1979]
Basionym: Camposporium aquaticum Dudka, Ukr. Bot. Zh. 23:91 (1966)
Synonymy: Sporidesmium ontariense Matsush., Matsush. Mycol. Mem. 3: 16 (1983)
Xylomyces aquaticus (Dudka) K.D. Hyde & Goh, Mycol. Res. 103(12): 1573 (1999)
Repetophragma ontariense (Matsush.) W.P. Wu, Fungal Diversity Res. Ser. 15: 82 (2005)
Freshwater distribution: England (Hyde and Goh 1999a), Spain (Hernández-Restrepo et al. 2017), Ukraine (Dudka 1966), USA (Tóth 1979)
Anteagloniaceae K.D. Hyde, J.K. Liu & A. Mapook, Fungal Diversity 63: 33 (2013)
Key to freshwater sexual genera of Anteagloniaceae
-
1.
Ascomata orange-pigmented at the apex, asci clavate to cylindric-clavate, ascospores hyaline, fusiform………Flammeascoma
-
2.
Ascomata stain the substrate purple, asci cylindrical, ascospores olivaceous, ellipsoidal………Purpureofaciens
Flammeascoma Phook. & K.D. Hyde, Fungal Diversity 72(1): 63 (2015)
Saprobic on submerged bamboo or dead wood. Sexual morph: Ascostromata solitary to gregarious, erumpent to superficial, visible as dull, black, dark at the basal region and orange brown at the apex, conical to lenticular, with a flattened base, uni- to bi-loculate, glabrous, coriaceous, ostiolate, with pore-like opening. Peridium thick-walled, of unequal thickness, poorly developed at the base, composed of several layers of dark, pseudoparenchymatous cells, with fungal tissue intermixed with the host cells. Pseudoparaphyses dense, trabeculate, filiform, hyaline, septate. Asci 8-spored, bitunicate, fissitunicate, clavate to cylindric-clavate, short pedicellate, apically rounded with well-developed ocular chamber. Ascospores uni- to bi-seriate, fusiform, hyaline, becoming brown when released from asci, septate, smooth-walled, with or without mucilaginous sheath (Liu et al. 2015). Asexual morph: Undetermined.
Type species: Flammeascoma bambusae Phook. & K.D. Hyde
Notes: Flammeascoma was introduced to accommodate F. bambusae, which was collected from submerged bamboo (Liu et al. 2015). Flammeascoma is similar to familial type Anteaglonium Mugambi & Huhndorf in the shape of asci and ascospores (Mugambi and Huhndorf 2009, Liu et al. 2015). However, Flammeascoma is unique in producing reddish orange pigmentation at the apex of ascostromata, while Anteaglonium lacks this character and always sits on a thin darkened crust with or without sparse, dark brown, septate subiculum (Mugambi and Huhndorf 2009; Ariyawansa et al. 2015; Liu et al. 2015).
Flammeascoma appears to be polyphyletic as F. bambusae (type) clusters with Anteaglonium gordoniae Jayasiri et al. and F. lignicola Boonmee & K.D. Hyde clusters with our new genus Purpureofaciens, but without bootstrap support (Fig. 2). More species are expected to clarify whether Flammeascoma is polyphyletic.
List of freshwater Flammeascoma species
*Flammeascoma bambusae Phookamsak & K.D. Hyde, Fungal Diversity 72(1): 64 (2015); Fig. 25
Freshwater distribution: Thailand (Liu et al. 2015)
Purpureofaciens W. Dong, H. Zhang & K.D. Hyde, gen. nov.
Index Fungorum number: IF557804; Facesoffungi number: FoF08717
Etymology: referring to staining the substrate purple
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata black, scattered or gregarious, semi-immersed to superficial, conical, flattened at the basal region, stain the substrate purple and produce reddish pigmentation at the apex, coriaceous, with a large, protuberant, ostiolate papilla. Peridium of unequal thickness, poorly developed at the base, composed of reddish brown, large cells of textura angularis. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, embedded in a hyaline gelatinous matrix. Asci 8-spored, bitunicate, cylindrical, pedicellate, apically rounded. Ascospores uniseriate, curved, olivaceous, septate, ellipsoidal with acute ends, guttulate, thin-walled, smooth, surrounded by a thin mucilaginous sheath. Asexual morph: Undetermined.
Type species: Purpureofaciens aquatica W. Dong, H. Zhang & K.D. Hyde
Notes: Purpureofaciens is unique by semi-immersed to superficial, conical ascomata staining woody substrate purple, cylindrical asci, ellipsoidal, curved, olivaceous ascospores with acute ends and white to reddish colonies in culture (Mugambi and Huhndorf 2009; Liu et al. 2015). The reddish culture is also observed in a strain of Anteaglonium parvulum (MFLUCC 14-0821), which has similar shape of ascospores, but the characters of ascomata, asci and ascospores can easily separate them (Jayasiri et al. 2016). Flammeascoma has reddish pigmentation at the apex of ascomata, which resembles Purpureofaciens. However, the conical ascomata with a large, protuberant, ostiolate papilla, cylindrical asci and ellipsoidal, olivaceous ascospores of Purpureofaciens are different from those of Flammeascoma (Liu et al. 2015). Purpureofaciens clusters with Flammeascoma species with low bootstrap support (Fig. 2) and morphology separates them as distinct genera. Purpureofaciens comprises one freshwater species P. aquatica which was collected from Thailand.
List of freshwater Purpureofaciens species
*Purpureofaciens aquatica W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557902; Facesoffungi number: FoF08718; Fig. 26
Etymology: in reference to aquatic habitat of the fungus
Holotype: MFLU 18-1569
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 200–300 μm high, 300–400 μm diam., dark brown to black, scattered or gregarious, semi-immersed to superficial, conical, flattened at the basal region, stain the substrate purple and produce reddish pigmentation at the apex, coriaceous, with a large, protuberant, ostiolate papilla, 110–130 μm long, 110–130 μm wide. Peridium unequal thickness, poorly developed at the base, up to 45 μm at the sides and 15 μm at the base, composed of reddish brown, large cells of textura angularis. Pseudoparaphyses 2 μm diam., numerous, trabeculate, filiform, hyaline, embedded in a hyaline gelatinous matrix. Asci 135–150 × 8.5–11 μm (\( {\bar{\text{x}}} \) = 143 × 9.7 μm, n = 10), 8-spored, bitunicate, cylindrical, pedicellate, apically rounded. Ascospores 15–22 × 7–10 μm (\( {\bar{\text{x}}} \) = 18.5 × 8 μm, n = 20), uniseriate, curved, olivaceous, 1-septate, constricted at the septum, ellipsoidal with acute ends, with two prominent guttules when immature, thin-walled, smooth, surrounded by a thin mucilaginous sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 50 mm diam. in 25 days at 25 °C, annulate, white to reddish to purplish red from center to edge, surface rough, dry, raised, edge entire.
Material examined: THAILAND, Satun Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat266-1 (MFLU 18-1569, holotype), ex-type living culture MFLUCC 18-1241; ibid. hat266-2 (HKAS 105016, isotype), ex-type living culture KUMCC 19-0032.
Aquasubmersaceae A. Hashim. & Kaz. Tanaka, Persoonia 39: 56 (2017)
Aquasubmersa K.D. Hyde & H. Zhang, Cryptog. Mycol. 33(3): 340 (2012)
Saprobic on submerged or dead wood. Sexual morph: Ascomata scattered to grouped, immersed to semi-immersed, uniloculate, subglobose, glabrous, dark brown to black, with ostiolate papilla. Peridium composed of flattened, thin-walled cells of textura angularis. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, septate. Asci 8-spored, bitunicate, cylindrical, short pedicellate, apically rounded, with an ocular chamber. Ascospores biseriate, broadly fusiform with rounded ends, straight, hyaline, with one mostly median septum, with gelatinous sheath (Ariyawansa et al. 2015). Asexual morph: Coelomycetous. Pycnidia solitary to scattered, semi-immersed to superficial, subglobose to ellipsoidal, dark brown to black, ostiolate, minute or without papilla. Ostiole circular, dark-brown, central. Peridium composed of polygonal, hyaline to brown cells. Conidiophores reduced. Conidiogenous cells holoblastic, determinate, lageniform, hyaline, smooth. Conidia ellipsoidal, some with papillate base, hyaline, aseptate, smooth, thin-walled, without sheath or appendage (Zhang et al. 2012a).
Type species: Aquasubmersa mircensis Huang Zhang & K.D. Hyde
Notes: Aquasubmersa was established to accommodate a freshwater coelomycetous species, A. mircensis (Zhang et al. 2012a). It was placed in the family Lophiotremataceae in previous studies (Ariyawansa et al. 2015; Doilom et al. 2017). A comprehensive study on Lophiotremataceae based on morphological observations and multigene analyses showed that Aquasubmersa should be transferred to a newly established family Aquasubmersaceae (Hashimoto et al. 2017). The second species, A. japonica A. Hashim. & Kaz. Tanaka with sexual morph, was also collected from freshwater habitats and conidiomata were produced in culture (Ariyawansa et al. 2015). The asexual morph of A. japonica matches the generic concept of Aquasubmersa. It differs from A. mircensis by pycnidia with minute papilla, thicker peridium and conidia lacking papillate bases. The type material of A. mircensis was re-examined by Li et al. (2020) and this study.
List of freshwater Aquasubmersa species
*Aquasubmersa japonica A. Hashim. & Kaz. Tanaka, Fungal Diversity 75: 87 (2015)
Freshwater distribution: Japan (Ariyawansa et al. 2015)
*Aquasubmersa mircensis H. Zhang & K.D. Hyde, Cryptog. Mycol. 33(3): 340 (2012); Fig. 27
Freshwater distribution: Thailand (Zhang et al. 2012a)
Key to freshwater Aquasubmersa species
1. Pycnidia up to 215 μm high, 115–195 μm diam., with minute papilla, peridium > 20 µm thick, conidia without papillate base………A. japonica
1. Pycnidia 130–170 μm high, 150–250 μm diam., without papilla, peridium < 20 μm thick, conidia with papillate base………A. mircensis
Astrosphaeriellaceae Phook. & K.D. Hyde, Fungal Diversity 74: 161 (2015)
Key to freshwater genera of Astrosphaeriellaceae
-
1.
Asci mostly broadly clavate………2
-
1.
Asci cylindrical………3
-
2.
Ascospores hyaline, cylindrical………Aquatospora
-
2.
Ascospores mostly dark brown to black, fusiform to broad-ellipsoid or biconic………Caryospora
-
3.
Producing hyphomycetous asexual morph………Pithomyces
-
3.
Producing coelomycetous asexual morph or unknown………4
-
4.
Ascospores brown to reddish brown, with paler end cells………Xenoastrosphaeriella
-
4.
Ascospores hyaline to brown, without paler end cells………Astrosphaeriella
Aquatospora W. Dong, H. Zhang & K.D. Hyde, gen. nov.
Index Fungorum number: IF557903; Facesoffungi number: FoF09245
Etymology: referring to aquatic habitat of this fungus
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata black, scattered or gregarious, superficial, hemisphaerical to conical, base flattened, carbonaceous, with ostiolate papilla. Ostiole central, relatively broad, circular, black. Peridium uneven in width, carbonized, composed of black amorphous layer, whose cells are obscured. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, sparsely septate. Asci 8-spored, bitunicate, clavate to narrowly ellipsoidal, with a short pedicel, apically rounded. Ascospores 2–4-seriate, hyaline, septate, subcylindrical, thin-walled, smooth. Asexual morph: Undetermined.
Type species: Aquatospora cylindrica W. Dong, H. Zhang & K.D. Hyde
Notes: Aquatospora clusters with Acrocordiopsis Borse & K.D. Hyde and Xenoastrosphaeriella Jayasiri et al. with low bootstrap support (Fig. 2). Acrocordiopsis is a problematic genus, which was placed in Salsugineaceae by Hyde et al. (2013) and Caryosporaceae by Ariyawansa et al. (2015). Acrocordiopsis was referred to Salsugineaceae (Wijayawardene et al. 2018, 2020) based on some common morphology between Acrocordiopsis and Salsuginea K.D. Hyde (Borse and Hyde 1989; Hyde 1991). Acrocordiopsis clustered distantly from Salsuginea in the phylogenetic tree of Zhang et al. (2018) and close to Aquatospora in our study (Fig. 2). Xenoastrosphaeriella differs from Aquatospora in having paler end cells of ascospores (Hawksworth and Boise 1985; Phookamsak et al. 2015b; Jayasiri et al. 2019). Aquatospora shares similar characters with Astrosphaeriellaceae members in having large, erumpent to superficial, hemisphaerical or conical, carbonaceous ascomata with nearly flattened bases (Borse and Hyde 1989; Ariyawansa et al. 2015; Phookamsak et al. 2015b). However, the unique combination of morphology of clavate to narrowly ellipsoidal asci, hyaline, cylindrical ascospores and molecular characters warrant Aquatospora as a new genus (more details see key to freshwater genera of Astrosphaeriellaceae).
List of freshwater Aquatospora species
*Aquatospora cylindrica W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557904; Facesoffungi number: FoF09246; Fig. 28
Etymology: referring to cylindrical ascospores of this fungus
Holotype: MFLU 18-1534
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 600–650 μm high, 800–900 μm diam., black, scattered or gregarious, superficial, hemisphaerical to conical, base flattened, carbonaceous, with ostiolate papilla. Ostiole central, relatively broad, circular, black. Peridium up to 155 μm at the sides and 65 μm at the base, carbonized, composed of black amorphous layer, whose cells are obscured. Pseudoparaphyses 0.5 μm diam., numerous, trabeculate, filiform, hyaline, sparsely septate. Asci 175–270 × 50–65 μm (\( {\bar{\text{x}}} \) = 225 × 58 μm, n = 10), 8-spored, bitunicate, clavate to narrowly ellipsoidal, straight or slightly curved, with a short pedicel, apically rounded. Ascospores 70–85 × 20–25 μm (\( {\bar{\text{x}}} \) = 77 × 23 μm, n = 10), 2–4-seriate, cylindrical, slightly tapering at two sides, 1-septate, constricted at the septum, hyaline, straight, with four prominent big guttules, thin-walled, smooth, without sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 40 mm in 35 days at 25 °C, brown to white from above, dark brown from below, surface rough, dry, raised, edge entire.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat146-1 (MFLU 18-1534, holotype), ex-type living culture MFLUCC 18-1287; ibid., hat146-2 (HKAS 105042, isotype), ex-type living culture KUMCC 19-0060.
Astrosphaeriella Syd. & P. Syd., Annls mycol. 11(3): 260 (1913)
Saprobic or parasitic on bamboo, palm or stout grasses in freshwater or terrestrial habitats. Sexual morph: Ascostromata solitary to gregarious, erumpent to superficial, conical or mammiform, at maturity with stellate appearance from above, dark opaque, uniloculate, glabrous, brittle, carbonaceous, ostiolate. Peridium relatively thick, poorly developed at the base, composed of thick, opaque and melanized cells, arranged in a textura angularis with palisade-like cells at the rim. Pseudoparaphyses dense, trabeculate, filiform, hyaline, anastomosing, embedded in a hyaline gelatinous matrix. Asci 8-spored, bitunicate, fissitunicate, cylindrical to cylindric-clavate, subsessile to short-pedicellate, apically rounded with ocular chamber. Ascospores overlapping uni- to bi-seriate, hyaline to brown, fusiform with rounded to acute ends, septate, smooth, with or without appendages or mucilaginous sheaths (Phookamsak et al. 2015b). Asexual morph: Coelomycetous. Conidiomata pycnidial, scattered or solitary, immersed to superficial, conical or hemisphaerical to globose. Pycnidial walls composed of several layers of dark brown to black, textura angularis to textura intricata of cells. Conidiophores reduced to conidiogenous cells. Conidiogenous cells holoblastic or phialidic, integrated, cylindrical or cylindric-clavate or ampulliform, septate or aseptate, hyaline, smooth. Conidia globose to subglobose, or oblong, aseptate, hyaline, smooth (Phookamsak et al. 2015b).
Type species: Astrosphaeriella fusispora Syd. & P. Syd.
Notes: Astrosphaeriella is characterized by carbonaceous, conical to mammiform ascostromata with ruptured, reflexed, stellate, host remnants and hyaline to brown, fusiform ascospores (Liu et al. 2011; Phookamsak et al. 2015b). Astrosphaeriella aquatica K.D. Hyde, A. seychellensis K.D. Hyde & Goh and A. thailandensis J. Ren et al. were only found from freshwater habitats (Hyde 1994; Hyde and Frohlich 1998; Hyde and Goh 1998b; Ren et al. 2013). Other freshwater Astrosphaeriella species were found from both freshwater and terrestrial habitats (see list below). Astrosphaeriella aquatica resembles A. seychellensis and A. thailandensis in having hyaline, fusiform ascospores, but differs in having a wide spreading mucilaginous sheath which is drawn out at the poles.
Phookamsak et al. (2015b) transferred Astrosphaeriella sensu lato, which have coriaceous ascomata with short to long neck and striate ascospores, to a newly established family Pseudoastrosphaeriellaceae. Astrosphaeriella papuana Aptroot has striate ascospores which are typical characters of Pseudoastrosphaeriellaceae (Aptroot 1995; Hyde and Frohlich 1998; Phookamsak et al. 2015b). However, molecular data for A. papuana is unavailable, thus this species is retained in Astrosphaeriellaceae. Astrosphaeriella papuana might be transferred to Pseudoastrosphaeriellaceae when the type specimen is recollected and recircumscribed.
Astrosphaeriella stellata (Pat.) Sacc. was treated as an earlier name of A. fusispora and followed by some studies (Hyde and Frohlich 1998; Hyde et al. 2000; Tanaka et al. 2009; Liu et al. 2011). Liu et al. (2011) named one collection MFLUCC 10-0555 as A. stellata, which was later considered as a reference specimen of A. fusispora (Phookamsak et al. 2015b). Therefore, A. stellata isolated from freshwater habitats is probably a collection of A. fusispora.
The asexual morph was developed in the culture of Astrosphaeriella bambusae Phookamsak& K.D. Hyde (Phookamsak et al. 2015b).
List of freshwater Astrosphaeriella species
Astrosphaeriella aquatica K.D. Hyde, Mycol. Res. 98(7): 719 (1994)
Freshwater distribution: Papua New Guinea (Hyde 1994), Ecuador (Hyde and Frohlich 1998)
Astrosphaeriella exorrhiza Boise, Sydowia 38: 117 (1986) [1985]
Freshwater distribution: Ecuador (Hyde and Frohlich 1998)
Astrosphaeriella maquilingiana (Rehm) K.D. Hyde & J. Fröhl., Sydowia 50(1): 103 (1998)
Basionym: Trematosphaeria maquilingiana Rehm, Leafl. of Philipp. Bot. 8: 2952 (1916)
Synonymy: Trematosphaeria maquilingiana var. schizostachyi Rehm, Leafl. of Philipp. Bot. 8: 2952 (1916)
Trematosphaeria maquilingiana Rehm, Leafl. of Philipp. Bot. 8: 2952 (1916) var. maquilingiana
Freshwater distribution: Australia (Vijaykrishna and Hyde 2006)
Astrosphaeriella papuana Aptroot, Nova Hedwigia 60(3–4): 333 (1995)
Freshwater distribution: Papua New Guinea (Hyde and Frohlich 1998), Philippines (Cai et al. 2003a)
Astrosphaeriella seychellensis K.D. Hyde & Goh, S. Afr. J. Bot. 64: 332 (1998)
Freshwater distribution: Seychelles (Hyde and Goh 1998b)
*Astrosphaeriella stellata (Pat.) Sacc., Syll. fung. (Abellini) 24(2): 938 (1928); Fig. 29
Basionym: Amphisphaeria stellata Pat., Bull. Soc. mycol. Fr. 29: 223 (1913)
Synonymy: Astrosphaeriella stellata var. palmicola F. San Martín & P. Lavín, Lavin & Lavín, Acta Bot. Mexicana 46: 22 (1999)
Astrosphaeriella bambusella Höhn., Sber. Akad. Wiss. Wien, Math.-naturw. Kl., Abt. 1 129: 168 (1920)
Astrosphaeriella fuscomaculans W. Yamam., Sci. Rep. Hyogo Univ. Agric., Ser. 2, Agr. Biol. 1: 63 (1954)
Microthelia fuscomaculans (W. Yamam.) E. Müll., Beitr. Kryptfl. Schweiz 11(no. 2): 286 (1962)
Freshwater distribution: China (Tsui et al. 2001d; Wong and Hyde 2001; Luo et al. 2004; Hu et al. 2013), Philippines (Cai et al. 2003a)
Astrosphaeriella thailandensis J. Ren, C.Y. Jie, Y.L. Jiang, K.D. Hyde & Yong Wang bis, Sydowia 65(1): 33–43 (2013)
Freshwater distribution: Thailand (Ren et al. 2013)
Key to freshwater Astrosphaeriella species
-
1.
Ascospores surrounded by sheath or with appendage………2
-
1.
Ascospores without sheath or appendage………6
-
2.
Ascospores sometimes slightly verrucose………A. maquilingiana
-
2.
Ascospores smooth-walled………3
-
3.
Ascospores with minute appendages at both ends………A. exorrhiza
-
3.
Ascospores surrounded by a mucilaginous sheath………4
-
4.
Ascospores pigmented………A. stellata
-
4.
Ascospores hyaline………5
-
5.
Ascospores 30–42 × 7–8 μm, sheath drawn out at the poles………A. aquatica
-
5.
Ascospores 16–22 × 4–4.5 μm, sheath appears as remnants in drided material………A. seychellensis
-
6.
Ascospores with striate ornamentation………A. papuana
-
6.
Ascospores smooth-walled………A. thailandensis
Caryospora De Not., Micr. Ital. Novi 9: 7 (1855)
Saprobic on submerged wood, decaying fruit pericarp or old stone of Amygdalus persica. Sexual morph: Ascomata pseudothecioid, medium to large, scattered, erumpent to superficial, uniloculate, broadly conical or hemispherical, with flattened base, brown to black, carbonaceous, with ostiolate papilla. Ostiole relatively broad, central, circular. Peridium thicker at sides and thinner at base, strongly carbonized. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, sparsely septate. Asci 2(8)-spored, bitunicate, fissitunicate, broadly cylindrical to clavate or obclavate, pedicellate. Ascospores large, bi- to tri-seriate, fusiform to broad-ellipsoid or biconic, straight, usually hyaline when young, becoming pigmented at maturity, septate, most symmetrical, smooth or rough, often with polar germ pores at each end, thin- to thick-walled, with or without sheath. Asexual morph: Undetermined.
Type species: Caryospora putaminum (Schwein.) Fuckel
Notes: Caryospora was placed in Caryosporaceae based on sequence data of C. aquatica and one putative strain of C. minima (Ariyawansa et al. 2015). Caryospora clustered with Acrocordiopsis with weak bootstrap support (Ariyawansa et al. 2015). Jayasiri et al. (2019) placed Caryospora in Astrosphaeriellaceae based on the similarity of carbonaceous ascostromata and trabeculate pseudoparaphyses with other genera in Astrosphaeriellaceae. However, Astrosphaeriellaceae members, including Caryospora, did not form a well-supported clade (Jayasiri et al. 2019; this study, Fig. 2). Zopfia rhizophila Rabenh. (Zopfiaceae) also clustered in Astrosphaeriellaceae, but with low bootstrap support (Jayasiri et al. 2019; this study, Fig. 2). In this study, we follow Jayasiri et al. (2019) and accept Caryospora in Astrosphaeriellaceae based on morphology.
Caryospora obclavata was reported from freshwater habitat and characterized by obclavate asci with ellipsoidal to biconic ascospores uniseriately arranged at the apex and base (Raja and Shearer 2008). The taxonomic placement of this species needs to be confirmed with molecular data. We introduce one new species C. submersa based on morphology and phylogeny. Additionally, C. aquatica and C. quercus are redescribed and reported as new geographical record in Thailand and new habitat record in freshwater, respectively.
List of freshwater Caryospora species
*Caryospora aquatica H. Zhang, K.D. Hyde & Ariyawansa, Fungal Diversity 75: 54 (2015); Figs. 30, 31
Freshwater Distribution: China (this study), Thailand (Ariyawansa et al. 2015)
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 270–310 μm high, 250–330 μm diam., black, scattered or gregarious, superficial, hemisphaerical, flattened at the base, carbonaceous, ostiolate, always covered with mass of black, glistening ascospores. Peridium 50–60 μm at the sides, poorly developed at the base, easily cracked, two-layered, outer layer strongly carbonized, amorphous, composed of several layers of black cells that cannot be differentiated and often occluded, inner layer composed of several layers of hyaline cells of textura angularis. Pseudoparaphyses 2 μm diam., numerous, trabeculate, filiform, hyaline, septate. Asci 160–210(–270) × 45–58 μm (\( {\bar{\text{x}}} \) = 190 × 52 μm, n = 10), 8-spored, bitunicate, narrowly to broadly clavate, with short pedicel, apically rounded. Ascospores 35–48 × 18–28 μm (\( {\bar{\text{x}}} \) = 42 × 22 μm, n = 40), biseriate, straight, broadly fusiform, hyaline to pale brown, 1-septate when young, becoming irregularly diamond-shaped, dark brown to black, 3-septate when mature, with rounded ends, constricted and darker at the median septum, not constricted and inconspicuous at two terminal septa, asymmetric, with two large central cells and two small end cells, guttulate, thick-walled, smooth, sometimes with polar germ pores at each end, surrounded by an irregular, mucilaginous sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 15 mm diam. in 50 days at 25 °C, grey from above, black from below, surface rough, dry, with dense mycelium, raised, edge entire.
Material examined: CHINA, Yunnan Province, on submerged wood in a stream, 25 November 2017, G.N. Wang, H3A-1 (MFLU 18-1202), living culture MFLUCC 18-1030; ibid., H3A-2 (HKAS 101729), living culture KUMCC 18-0079.
Notes: Our new collection MFLUCC 18-1030 clusters with Caryospora aquatica H. Zhang et al. (MFLUCC 11-0008) and one putative strain of C. minima Jeffers with high bootstrap support (Fig. 2). MFLUCC 18-1030 has identical LSU sequence data with C. aquatica MFLUCC 11-0008 and seven (including three gaps) nucleotide differences in ITS sequence data between the two isolates, which indicate them to be the same species. Morphologically, our collection has very similar morphological characters with C. aquatica (Figs. 30, 31), except the slightly thinner asci (45–58 μm wide vs. 60–80 μm wide) and irregular sheaths (Ariyawansa et al. 2015). Given this, we identify our collection MFLUCC 18-1030 as C. aquatica. This is a new geographical record of C. aquatica in China.
Caryospora minima was initially collected from putrescent putamina of Amygdalus persica in Maryland, USA (Jeffers 1940). Later, several freshwater collections of C. minima were reported in China, Philippines and South Africa (see freshwater distribution of this species), but they were not confirmed by molecular data. Cai and Hyde (2007b) provided LSU (EU196550) and SSU (EU196551) sequence data for C. minima without strain code, description, illustration and herbarium information. Thus, these two sequences are doubtful. A specimen (IFRD 083-010) under name C. minima is illustrated in this study (Fig. 32). However, this species should be treated with caution based on the holotype BPI 71132. It would be good to establish an epitype for C. minima with reliable sequence data.
*Caryospora minima Jeffers, Mycologia 32(4): 561 (1940); Fig. 32
Freshwater Distribution: China (Tsui et al. 2000; Luo et al. 2004), Philippines (Cai et al. 2003a), South Africa (Hyde et al. 1998)
Caryospora obclavata Raja & Shearer, Mycologia 100(3): 479 (2008)
Freshwater Distribution: USA (Raja and Shearer 2008)
*Caryospora quercus Jayasiri, E.B.G. Jones & K.D. Hyde, Mycosphere 10(1): 34 (2019); Fig. 33
Freshwater Distribution: Thailand (this study)
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 400–450 μm high, 410–460 μm diam., black, scattered, semi-immersed to superficial, conical, flattened at the base, carbonaceous, ostiolate, 70 μm diam., often covered with mass of black, glistening ascospores. Peridium 60–70 μm at the sides, poorly developed at the base, easily cracked, two-layered, outer layer strongly carbonized, composed of several layers of black cells that cannot be differentiated and often occluded, inner layer composed of 8–10 layers of hyaline, compressed cells of textura angularis. Pseudoparaphyses 2 μm diam., numerous, trabeculate, filiform, hyaline, distantly septate. Asci (165–)205–270(–305) × (58–)65–80 μm (\( {\bar{\text{x}}} \) = 235 × 70 μm, n = 10), 8-spored, bitunicate, narrowly to broadly clavate, indistinctly pedicellate which become tapered and disappeared with age, 30–60 μm long, apically rounded. Ascospores 47–60 × 19–33 μm (\( {\bar{\text{x}}} \) = 54 × 27 μm, n = 30), overlapping bi- to tri-seriate, straight, broadly fusiform to ellipsoidal, hyaline to pale brown, 1-septate when young, becoming irregularly diamond-shaped, dark brown to black, 3-septate when mature, with acute ends, constricted and darker at the median septum, not constricted and inconspicuous at two terminal septa, asymmetric, with two large central cells and two small end cells, thick-walled, smooth, sometimes with polar germ pores at each end, surrounded by a large, ellipsoidal, gelatinous, mucilaginous sheath, 3–37 μm thick, sheath two-layered and large when young, becoming one-layered and smaller after mature. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 5 mm diam. in 20 days at 25 °C, grey from above and brown from below, surface rough, dry, raised, edge entire.
Material examined: THAILAND, Chiang Mai Province, on submerged wood in a stream, 1 September 2017, X.D. Yu, 1A (MFLU 17-1705, holotype), ex-type living culture MFLUCC 17-2342; ibid., G.N. Wang, 4.2 (MFLU 17-1668), living culture MFLUCC 17-2323.
Notes: Our new collections MFLUCC 17-2342 and MFLUCC 17-2323 cluster with Caryospora quercus with strong bootstrap support (Fig. 2). They have identical LSU sequence data and there are two nucleotide differences in SSU sequence data between MFLUCC 17-2342 and MFLU 18-2151 (type). No other genes can be compared.
Our new collections have overlapping ascospore size (47–60 × 19–33 μm vs. 41–54 × 18–28 μm) and similar morphological characters with C. quercus, i.e. broadly fusiform to ellipsoidal and hyaline to pale brown when young, becoming irregularly diamond-shaped and dark brown to black when mature, with acute ends, with one primary median septum and two inconspicuous septa near both ends, asymmetric, and with a sheath (Jayasiri et al. 2019). However, the ascospore sheaths in our collections are up to 37 μm thick, while they are 5.5 μm thick in the holotype of C. quercus. This might be a result of only measuring the mature ascospores in Jayasiri et al. (2019), because they are 37 μm thick in young ascospores and 3 μm thick in mature ascospores in our collections. Additionally, our collections have longer and wider asci ((165–)205–270(–305) × (58–)65–80 μm vs. (69–)110–147 × 30–35 μm) than the holotype of C. quercus. It is very likely that Jayasiri et al. (2019) only measured the immature asci as shown in their photo plate. We identify our collections to be C. quercus based on current phylogenetic analysis (Fig. 2), single gene comparison and morphology. We supplement ITS sequence data for C. quercus. This is a new habitat record for C. quercus from freshwater in Thailand.
*Caryospora submersa W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557905; Facesoffungi number: FoF09248; Figs. 34, 35
Etymology: in reference to submerged habitat of the fungus
Holotype: MFLU 18-1539
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 400–450 μm high, 450–540 μm diam., black, scattered or gregarious, superficial, conical, flattened at the base, carbonaceous, with ostiolate papilla. Peridium 45–85 μm at the sides, poorly developed at the base, easily cracked, strongly carbonized, composed of several black, amorphous layers of cells that cannot be differentiated and often occluded. Pseudoparaphyses 2 μm diam., numerous, trabeculate, filiform, hyaline, sparsely septate. Asci 130–180 × 17–26 μm (\( {\bar{\text{x}}} \) = 160 × 21 μm, n = 20), 8-spored, bitunicate, narrowly obclavate, with rounded apex, short pedicellate, with a well-developed ocular chamber. Ascospores 38–50 × 8–12 μm (\( {\bar{\text{x}}} \) = 44 × 9 μm, n = 20), mostly uniseriate near the apex, becoming biseriate towards the base, straight or slightly curved, hyaline, 1-septate, constricted at the septum, narrowly fusiform, guttulate, thin-walled, smooth, surrounded by a large, oblong or ellipsoidal, mucilaginous sheath, 40–80 μm wide, sheath becoming thin and dumbbell-like in dried specimen, 1.5–2.5 μm wide at the sides and 5–15 μm wide at two ends. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular or ellipsoidal, reaching 10 mm diam. in 10 days at 25 °C, grey to black from above, dark brown from below, surface rough, dry, raised, edge entire.
Material examined: THAILAND, Songkhla Province, Chestnut hill, on submerged wood in a stream, 10 May 2018, W. Dong, hat458-1 (MFLU 18-1539, holotype), ex-type living culture MFLUCC 18-1283; ibid., hat458-2 (HKAS 105039, isotype), ex-type living culture KUMCC 19-0056; Satun Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat286-1 (MFLU 18-1541), living culture MFLUCC 18-1409; ibid., hat286-2 (HKAS 105070).
Notes: Caryospora submersa is similar to other Caryospora species in having superficial, dark, carbonaceous ascomata with flattened bases. Caryospora submersa is very different from other species by obclavate asci and narrowly fusiform, hyaline, thin-walled ascospores contrasting with broadly cylindrical to clavate asci and broadly fusiform, ellipsoidal or biconic, mostly pigmented, relatively thick-walled ascospores (Jeffers 1940; Hawksworth 1982; Abdel-Wahab and Jones 2000; Raja and Shearer 2008; Zhao and Zhao 2012; Ariyawansa et al. 2015). Caryospora submersa does not fit the generic concept of Caryospora except for the large, superficial, carbonaceous ascomata, which are similar to those in other genera within the family. However, C. submersa cannot be placed in other genera due to its distinct morphology and phylogenetically nests in Caryospora with strong bootstrap support (Fig. 2). Thus, Caryospora submersa sp. nov. is introduced.
Key to freshwater Caryospora species
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1.
Ascospores rough-walled………C. obclavata
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1.
Ascospores smooth-walled………2
-
2.
Ascospores thin-walled………C. submersa
-
2.
Ascospores thick-walled………3
-
3.
Ascospores pale brown when mature………C. minima
-
3.
Ascospores dark brown to black when mature………4
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4.
Ascospores 35–48 × 18–28 μm………C. aquatica
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4.
Ascospores 47–60 × 19–33 μm………C. quercus
Pithomyces Berk. & Broome, J. Linn. Soc., Bot. 14(no. 74): 100 (1873) [1875]
Saprobic in terrestrial or freshwater habitats. Sexual morph: Ascomata dark opaque, solitary to gregarious, erumpent to superficial, mammiform to conical, with ruptured, reflexed, stellate, host remnants around the base, uniloculate, glabrous, brittle, carbonaceous, with an indistinct ostiole. Peridium unequal thickness, poorly developed at the base, composed of thick, dark brown to black cells. Pseudoparaphyses dense, trabeculate, filiform, hyaline, sparsely septate. Asci 8-spored, bitunicate, fissitunicate, cylindrical, with furcate pedicel, apically rounded. Ascospores overlapping biseriate, pale brown to dark brown, fusiform with acute ends, septate, smooth-walled (Pratibha and Prabhugaonkar 2015; Wanasinghe et al. 2018a). Asexual morph: Hyphomycetous. Conidiophores mononematous, micronematous, mostly intercalary, sometimes denticulate, aseptate. Conidiogenous cells mono or polyblastic, hyaline to light brown, smooth. Conidia solitary, brown to black, obovate to oblong, verruculose to spinulose, transversely septate (Pratibha and Prabhugaonkar 2015; Wanasinghe et al. 2018a).
Type species: Pithomyces flavus Berk. & Broome
Notes: Pithomyces is similar to Astrosphaeriellaceae members in having dark, carbonaceous ascomata with a poorly developed base and fusiform ascospores (Liu et al. 2011; Phookamsak et al. 2015b; Wanasinghe et al. 2018a; Jayasiri et al. 2019). Pithomyces clustered in Astrosphaeriellaceae with low bootstrap support (Jayasiri et al. 2019; this study, Fig. 2), but morphologically belongs to Astrosphaeriellaceae.
Over 40 epithets are listed in Index Fungorum (2020), but only three have sequence data, viz. Pithomyces caryotae Wanas. et al., P. flavus and P. licualae Wanas. et al. Pithomyces flavus was found on the natural substratum associated with its sexual morph Astrosphaeriella vesuvius, which was confirmed in the phylogenetic analysis (Pratibha and Prabhugaonkar 2015). Wanasinghe et al. (2018a) found the asexual morphs of P. caryotae and P. licualae from culture, respectively. The asexual morphs of three species share similar morpholigical characters in having obovate, septate, pigmented and rough-walled conidia (Pratibha and Prabhugaonkar 2015; Wanasinghe et al. 2018a). Pithomyces flavus was recorded from freshwater habitats (Cai et al. 2002a; Hu et al. 2013), but not confirmed by molecular data.
List of freshwater Pithomyces species
*Pithomyces flavus Berk. & Broome, J. Linn. Soc., Bot. 14(no. 74): 100 (1873) [1875]
Basionym: Sphaeria vesuvius Berk. & Broome, J. Linn. Soc., Bot. 14(no. 74): 127 (1873) [1875]
Synonymy: Astrosphaeriella vesuvius (Berk. & Broome) D. Hawksw. & Boise, Sydowia 38: 122 (1986) [1985]
Freshwater distribution: China (Cai et al. 2002a; Hu et al. 2013)
Xenoastrosphaeriella Jayasiri, E.B.G. Jones & K.D. Hyde, Mycosphere 10(1): 36 (2019)
Saprobic on bamboo and palms in freshwater or terrestrial habitats. Sexual morph: Ascostromata dark opaque, gregarious, erumpent to superficial, mammiform to conical with ruptured, reflexed, stellate, host remnants around the base, uniloculate, glabrous, brittle, carbonaceous, central ostiolate, with pore-like opening. Peridium unequal thickness, poorly developed at the base, thick at the sides towards the apex, composed of thick, opaque and melanized cells. Pseudoparaphyses dense, trabeculate, hyaline, distinctly septate, anastomosing between the asci, embedded in a hyaline gelatinous matrix. Asci 8-spored, bitunicate, cylindrical, short pedicellate, apically rounded with an ocular chamber. Ascospores overlapping uni- to bi-seriate, brown to reddish brown, with paler end cells, fusiform with acute ends, septate, smooth-walled (Hawksworth and Boise 1985; Phookamsak et al. 2015b; Jayasiri et al. 2019). Asexual morph: Undetermined.
Type species: Xenoastrosphaeriella tornata (Cooke) Jayasiri & K.D. Hyde
Notes: Xenoastrosphaeriella was established by Jayasiri et al. (2019) to accommodate Astrosphaeriella tornata (Cooke) D. Hawksw. & Boise which formed a weakly supported clade with other genera in Astrosphaeriellaceae (Phookamsak et al. 2015b; this study, Fig. 2). Xenoastrosphaeriella is distinct in the family in having paler end cells of ascospores (Hawksworth and Boise 1985; Phookamsak et al. 2015b; Jayasiri et al. 2019). The second species Xenoastrosphaeriella trochus (D. Hawksw.) Phookamsak et al. was recently introduced based on morphology and phylogeny (Hongsanan et al. 2020a). Both species X. tornata and X. trochus were ever collected from freshwater habitats (see list below), but not confirmed by molecular data.
List of freshwater Xenoastrosphaeriella species
*Xenoastrosphaeriella tornata (Cooke) Jayasiri & K.D. Hyde, Mycosphere 10(1): 36 (2019)
Basionym: Trematosphaeria tornata Cooke, Grevillea 16(no. 79): 91 (1888)
Synonymy: Sphaeria tornata Berk. & M.A. Curtis, J. Acad. nat. Sci. Philad., N.S. 2(6): 290 (1854)
Astrosphaeriella tornata (Cooke) D. Hawksw. & Boise, Sydowia 38: 119 (1986) [1985]
Freshwater distribution: Philippines (Cai et al. 2003a)
*Xenoastrosphaeriella trochus (D. Hawksw.) Phookamsak, H.B. Jiang & K.D. Hyde, Mycosphere 11(1): 1762 (2020)
Basionym: Melanomma trochus Penz. & Sacc., Malpighia 11(9–10): 401 (1897)
Synonymy: Leptosphaeria trochus (Penz. & Sacc.) Höhn., Sber. Akad. Wiss. Wien, Math.-naturw. Kl., Abt. 1 118: 328 [54 repr.] (1909)
Asterella trochus (Penz. & Sacc.) Hara, Nippon-gaikingaku: 187 (1936)
Asterotheca trochus (Penz. & Sacc.) I. Hino, Bull. Miyazaki Coll. Agric. Forest. 10: 57 (1938)
Trematosphaeria trochus (Penz. & Sacc.) Teng, Sinensia, Shanghai 9: 257 (1938)
Astrosphaeriella trochus (Penz. & Sacc.) D. Hawksw., J. Linn. Soc., Bot. 82: 46 (1981)
Freshwater distribution: China (Tsui et al. 2000; Cai et al. 2002a, 2006b; Hu et al. 2013), Australia (Vijaykrishna and Hyde 2006), South Africa (Hyde and Frohlich 1998; Hyde et al. 1998)
Key to freshwater Xenoastrosphaeriella species
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1.
Ascospores 3-septate ········································ X. tornata
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1.
Ascospores mostly 5-septate ································· X. trochus
Bambusicolaceae D.Q. Dai & K.D. Hyde, Fungal Diversity 63: 49 (2013)
Bambusicola D.Q. Dai & K.D. Hyde, Cryptog. Mycol. 33(3): 367 (2012)
Saprobic on decaying bamboo or parasitic on living plant materials in terrestrial or freshwater habitats. Sexual morph: Ascostromata solitary to gregarious, immersed or semi-immersed and becoming erumpent, variable in shape, conical, convex or dome-shaped to ampulliform, globose to subglobose, with centrally located ostiole, with or without red pigment in the ostiole, uni- to multi- loculate, coriaceous, visible as raised, dark spots or elongate structures on host surface. Peridium composed of dark cells of textura angularis or textura epidermoidea or pseudoparenchymatous cells, normally with the flattened base comprising of thinner, hyaline, smaller cells or intermingling with host cells. Pseudoparaphyses dense, trabeculate, filiform, hyaline, indistinctly septate, anastomosing and branching above the asci. Asci 8-spored, bitunicate, cylindrical or cylindric-clavate, short pedicellate, with a shallow or well-developed chamber. Ascospores uni- to tri-seriate, fusiform, septate, mostly hyaline, rerely pale brown, mostly surrounded by a gelatinous sheath. Asexual morph: Coelomycetous. Conidiomata pycnothyrial, solitary to gregarious, scattered, immersed to semi-immersed, acerose or subglobose, pyriform or irregular, uni- to multi-loculate. Pycnidial wall composed of several layers, thin- to thick-walled, hyaline to dark brown cells of textura globulosa or textura angularis. Conidiophores indistinct. Conidiogenous cells holoblastic, annellidic, discrete, cylindrical, smooth. Conidia sometimes two types, macro and microconidia. Macroconidia cylindrical to ellipsoidal, pale brown to brown, septate, smooth, guttulate. Microconidia globose, oblong to ellipsoidal, hyaline to pale brown, aseptate, smooth, guttulate.
Type species: Bambusicola massarinia D.Q. Dai & K.D. Hyde
Notes: Bambusicola is well-studied because all species have sequence data in GenBank. Bambusicola is distinct in Bambusicolaceae in having fusiform, hyaline, mostly smooth-walled ascospores and cylindrical to ellipsoidal or globose conidia (Dai et al. 2012). The asexual morphs can be found in natural substrate (Bambusicola splendida D.Q. Dai & K.D. Hyde and B. irregulispora D.Q. Dai & K.D. Hyde) or in culture (B. massarinia D.Q. Dai & K.D. Hyde) (Dai et al. 2012). Bambusicola sometimes produces two types of conidia, such as B. dimorpha Thambugala et al. producing macro and micro conidia (Thambugala et al. 2017). Other Bambusicola species only formed macroconidia characterized as cylindrical to ellipsoidal, pale brown to brown, septate conidia. Bambusicola species are saprobic on decaying bamboo from Thailand or parasitic on living leaves or branches of Phyllostachys heteroclada Oliv. from China (Dai et al. 2012, 2015, 2017; Thambugala et al. 2017; Yang et al. 2019a). Herein, we report a new Bambusicola species isolated from submerged wood in China.
List of freshwater Bambusicola species
*Bambusicola aquatica W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557906; Facesoffungi number: FoF09249; Fig. 36
Etymology: referring to aquatic habitat of this fungus
Holotype: MFLU 18-1164
Saprobic on decaying bamboo submerged in freshwater. Sexual morph: Ascomata 180–210 μm high, 250–370 μm diam., black, gregarious, densely clustered in a large group, semi-immersed to superficial, conical or dome-shaped in section. Peridium comprising host and fungal tissues, laterally 85–95 μm thick, composed of dark brown to black, thick-walled cells of textura angularis intermingled with host cells, with thinner basal part 10–35 μm thick, composed of subhyaline, rim-like cells. Pseudoparaphyses 1.4–1.8 μm diam., numerous, trabeculate, filiform, hyaline, indistinctly septate. Asci 80–126.5(–202) × 7–9.5(–10.5) μm (\( {\bar{\text{x}}} \) = 99.5 × 9 μm, n = 15), 8-spored, bitunicate, cylindrical, apically rounded, with a shallow chamber and a short, twisted or straight pedicel, easily and rapidly elongate when mounted in water, up to 202 μm long. Ascospores 18–22.5 × 4–5 μm (\( {\bar{\text{x}}} \) = 20.5 × 4.5 μm, n = 40), overlapping biseriate or partially uniseriate, narrowly fusiform, the upper cell slightly broader than the lower one, sharply narrowed towards to ends which are narrowly rounded, mostly slightly curved, rarely straight, hyaline, 1-septate, deeply constricted at the septum, slightly constricted at a quarter, guttulate, the guttula in upper cell larger than the lower cell, thin-walled, smooth, with a thin, hyaline, inconspicuous, mucilaginous sheath which is 2 μm thick when mounted in water, but 5–10 μm thick when mounted in Indian Ink. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony irregular, reaching 30 mm diam. in 30 days at 25 °C, brown with pale green margin from above, dark brown from below, surface rough, with dense mycelium, dry, mucoid after old, edge undulate.
Material examined: CHINA, Yunnan Province, Dehong, on submerged wood in a stream, 25 November 2017, G.N. Wang, H29A-1 (MFLU 18-1164, holotype), ex-type living culture MFLUCC 18-1031; ibid., H29A-2 (HKAS 101730, isotype), ex-type living culture KUMCC 18-0080.
Notes: Bambusicola aquatica is most similar to B. loculata D.Q. Dai & K.D. Hyde in having narrowly fusiform, 1-septate, hyaline ascospores with narrowly rounded ends and an inconspicuous mucilaginous sheath (Dai et al. 2015). However, they can be distinguished by their ascus characteristics (cylindric-clavate, bi- to tri-seriate, 80–105 × 8–13 μm in B. loculata vs. cylindrical, overlapping biseriate or partially uniseriate, 80–126.5(–202) × 7–9.5(–10.5) μm in B. aquatica). Additionally, the ascomata of B. loculata are solitary or clustered in a small group, while those of B. aquatica are gregarious and densely clustered in a large group.
Bambusicola aquatica forms a strongly supported clade with B. irregulispora (Fig. 2). Bambusicola aquatica is an ascomycetous species, while B. irregulispora is a coelomycetous species. There are respectively 5, 6, 30 and 14 nucleotide differences in the LSU, ITS, TEF and RPB2 sequence data between B. aquatica (MFLUCC 18-1031) and B. irregulispora (MFLUCC 11-0437), which supports them to be different species (Jeewon and Hyde 2016).
Nigrogranaceae Jaklitsch & Voglmayr, Stud. Mycol. 85: 54 (2016)
Nigrograna Gruyter, Verkley & Crous, Stud. Mycol. 75: 31 (2012) [2013]
Saprobic on submerged wood, decaying twigs of shrubs and trees, old fructifications of pyrenomycetes, sometimes as human pathogenic. Sexual morph: Ascomata solitary to gregarious, immersed to superficial, somewhat globose, brown to black, ostiolate. Peridium comprising several layers, angular cells. Pseudoparaphyses numerous, trabeculate, filiform, septate, branching and anastomosing. Asci 8-spored, bitunicate, cylindrical to clavate, or broadly filiform, with short pedicellate and knob-like base. Ascospores overlapping, broadly fusiform to narrowly ellipsoid, inequilateral, septate, hyaline to brown, smooth or faintly verruculose (Jaklitsch and Voglmayr 2016; Hyde et al. 2017; Tibpromma et al. 2017). Asexual morph: Coelomycetous. Pycnidia similar to ascomata, solitary or rarely grerarious, superficial or submerged in agar, globose to subglobose or pyriform, olivaceous to olivaceous-black, with dark brown, septate mycelial outgrowths, with ostiolate papilla. Peridium comprising several layers of pseudoparenchymatous cells. Conidiophores filiform, simple to sparsely branched, with pegs along one or two sides and solitary terminal phialides, reduced in culture. Conidiogenous cells phialidic, discrete, ampulliform, lageniform or subcylindrical, hyaline. Conidia oblong, cylindrical or allantoid, sometimes ellipsoid, hyaline or subhyaline, brown in mass, aseptate, smooth (de Gruyter et al. 2013; Jaklitsch and Voglmayr 2016). Hyphomycetous. Synnemata superficial, effuse, gregarious, black. Mycelium mostly immersed, composed of septate, pale brown, smooth hyphae. Conidiophores macronematous, synnematous on substratum, septate, unbranched to branched, smooth, brown, compacted below half and flared at the tip. Conidiogenous cells polyblastic, terminal or intercalary, sympodial, smooth, swollen subcylindrical, ampulliform, denticulate, covered with several conidiogenous loci, hyaline to subhyaline. Conidia solitary, acrogenous, simple, dry, ellipsoidal, smooth, thin-walled, aseptate, hyaline.
Type species: Nigrograna mackinnonii (Borelli) Gruyter, Verkley & Crous
Notes: Most Nigrograna species were collected from terrestrial habitats and are morphologically very similar. Sexual and asexual morphs have been reported from natural substrates and characterized as ascomycetous and coelomycetous species (Jaklitsch and Voglmayr 2016; Tibpromma et al. 2017). Only Nigrograna cangshanensis was reported from freshwater habitats (China), and it differs from other speices by thicker peridium and molecular characters (Tibpromma et al. 2017). We collected a hyphomycetous species from submerged wood in Thailand, which expands the known morph of this genus.
List of freshwater Nigrograna species
*Nigrograna aquatica W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557907; Facesoffungi number: FoF09250; Fig. 37
Etymology: in reference to aquatic habitat of this fungus
Holotype: MFLU 17-1661
Saprobic on submerged wood in freshwater. Sexual morph: Undetermined. Asexual morph: Synnemata 110–125 × 8.5–14.5 μm (\( {\bar{\text{x}}} \) = 118 × 11.8 μm, n = 5), superficial, effuse, gregarious, black, upper part covered with a white or pale grey powdery mass of conidia, composed of paralleled conidiophores. Mycelium mostly immersed, composed of septate, pale brown, smooth hyphae. Conidiophores 100–120 × 1.5–2 μm (\( {\bar{\text{x}}} \) = 100.5 × 1.7 μm, n = 15), macronematous, synnematous on substratum, not compacted, become divergent after mounted in water, unbranched, septate, not constricted at the septa, smooth, dark brown at the base, gradually paler towards the apex, flared in upper part. Conidiogenous cells 4–7.5 × 1.7–2.5 μm (\( {\bar{\text{x}}} \) = 5.6 × 2.2 μm, n = 10), polyblastic, terminal or intercalary, integrated when terminal and discrete when intercalary, sympodial, smooth, swollen subcylindrical, flask-shaped, ampulliform, curved or straight, denticulate, covered with several conidiogenous loci at the upper part, hyaline to subhyaline. Conidia 6–7 × 2–2.5 μm (\( {\bar{\text{x}}} \) = 6.6 × 2.2 μm, n = 15), solitary, acrogenous, simple, dry, ellipsoidal or cylindrical, smooth, thin-walled, aseptate, hyaline.
Culture characteristics: On PDA, colony circular, reaching 25 mm diam. in 30 days at 25 °C, brown to grey from above, dark brown from below, surface rough, with dense mycelium, dry, raised, edge entire.
Material examined: THAILAND, Phayao Province, on submerged wood in a stream, 4 August 2017, G.N. Wang, G11 (MFLU 17-1661, holotype), ex-type living culture MFLUCC 17-2318.
Notes: Nigrograna aquatica is morphologically similar to Phaeoisaria species which are characterized by synnematous conidiophores with polyblastic, sympodial conidiogenous cells (Cai et al. 2006a). However, they cannot be congeneric because N. aquatica differs in having not compacted synnemata which easily become divergent after mounted in water. In contrast, the conidiophores of Phaeoisaria are compacted and parallel adpressed, and never become divergent in water (Liu et al. 2015; Hyde et al. 2018a; Luo et al. 2018). The ellipsoidal or cylindrical, hyaline, aseptate, small conidia of N. aquatica are similar to those coelomycetous species in Nigrograna (de Gruyter et al. 2013; Jaklitsch and Voglmayr 2016). However, phylogenetic analyses showed them as distinct species (Fig. 2). The phylogenetically closest species N. locuta-pollinis F. Liu & L. Cai was isolated from hive-stored pollen collected in Italian honey bee colonies, while N. aquatica was collected from submerged wood in freshwater habitats in Thailand. Morphology of N. locuta-pollinis was not given in protologue (Zhao et al. 2018). A comparison of their nucleotides shows that there are six and eight (including two gaps) nucleotide differences in LSU and ITS sequence data, respectively. We introduce N. aquatica sp. nov. based on the guideline of Jeewon and Hyde (2016) and this is the first hyphomycetous species in Nigrograna.
*Nigrograna cangshanensis Z.L. Luo, H.Y. Su & K.D. Hyde, Fungal Diversity 83: 52 (2017)
Freshwater distribution: China (Tibpromma et al. 2017)
Key to freshwater Nigrograna species
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1.
Sexual morph………N. cangshanensis
-
2.
Asexual morph………N. aquatica
Corynesporascaceae Sivan., Mycol. Res. 100(7): 786 (1996)
Corynespora Güssow, Z. PflKrankh. 16: 13 (1906)
Pathogenic and saprobic on leaves or submerged wood. Sexual morph: Corynesporasca. Ascomata solitary to aggregated, superficial or immersed, uniloculate, globose, dark brown to black, lacking ostioles. Peridium comprising several layers of thin-walled, brown cells of textura globosa or angularis. Pseudoparaphyses cylindrical, branched, septate, apically free, disintegrate when asci mature. Asci 8-spored, bitunicate, obovoid, deliquescent. Ascospores oblong, pale to dark brown, usually asymmetric, 1-euseptate near the center, with or without indistinctly 1-distoseptate in the upper and lower cell, constricted at the central euseptum (Sivanesan 1996; Hyde et al. 2013). Asexual morph: Hyphomycetous. Colonies on the natural substrate effuse, hairy, amphigenous, brown. Mycelium superficial to immersed in the substrate, composed of branched, septate, thin-walled, smooth, subhyaline to brown hyphae. Conidiophores macronematous, mononematous, erect to procumbent, simple, none to few septate, smooth. Conidiogenous cells monotretic, integrated, terminal, determinate or percurrent proliferation. Conidia acrogenous, solitary, obclavate, wide at the truncate base, tapering towards the apex, pale brown to pale olivaceous brown, multi-distoseptate, smooth-walled, usually with a slightly melanized basal scar (Hyde et al. 2013).
Type species: Corynespora cassiicola (Berk. & M.A. Curtis) C.T. Wei
Notes: Corynespora is characterized by obclavate, brown, multi-distoseptate conidia with slightly melanized basal scar (Hyde et al. 2013). Sivanesan (1996) linked C. caryotae Sivan. as the sexual morph of Corynespora based on cultural method. Based on the extensive use of the name Corynespora for plant pathogenic fungi and its priority, Rossman et al. (2015) formally synonymized Corynesporasca Sivan. under Corynespora. Corynespora is therefore the only genus in Corynesporascaceae (Sivanesan 1996; Wijayawardene et al. 2018). Corynespora was revealed as polyphyletic (Schoch et al. 2009; Voglmayr and Jaklitsch 2017). Two freshwater species C. lignicola Z.L. Luo et al. and C. submersa Z.L. Luo et al. formed a well-supported clade with the type species C. cassiicola, which was represented by a strain CBS 100822 (Hyde et al. 2020a). Corynespora aquatica R.F. Castañeda et al. was reported from freshwater habitats, but not confirmed by molecular data (Castañeda-Ruiz et al. 2004).
List of freshwater Corynespora species
Corynespora aquatica R.F. Castañeda, Heredia & R.M. Arias, Mycotaxon 89: 298 (2004)
Freshwater distribution: Mexico (Castañeda-Ruiz et al. 2004)
*Corynespora lignicola Z.L. Luo, H.Y. Su & K.D. Hyde, Asian Journal of Mycology 3: 65 (2020)
Freshwater distribution: China (Hyde et al. 2020a)
*Corynespora submersa Z.L. Luo, H.Y. Su & K.D. Hyde, Asian Journal of Mycology 3: 63 (2020)
Freshwater distribution: China (Hyde et al. 2020a)
Key to freshwater Corynespora species
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1.
Conidia cylindrical………C. lignicola
-
1.
Conidia obclavate………2
-
2.
Conidia 100–150 μm long………C. submersa
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2.
Conidia 34–46 μm long………C. aquatica
Delitschiaceae M.E. Barr, Mycotaxon 76: 109 (2000)
Delitschia Auersw., Hedwigia 5: 49 (1866)
Saprobic on old herbivore dung or submerged wood. Sexual morph: Ascomata solitary or scattered, immersed to semi-immersed, globose to subglobose or subpyriform, often covered with dense, hyphoid hairs, semitransparent to brown or black, uniloculate, membranous to coriaceous, with a neck. Neck blackish, central, usually coriaceous, with a wide opening and a smooth or tuberculate to hairy surface. Peridium thick at the apex, thinner at the base. Pseudoparaphyses numerous, trabeculate, filiform, long, hyaline, septate, anastomosing and branching. Asci 4- to poly-spored, bitunicate, cylindrical to cylindro-clavate, short or long pedicellate. Ascospores partially overlapping, obliquely uniseriate, ellipsoid, reddish brown, 1-septate, cells often easily separable from each other, each cell with a full length germ slit (Luck-Allen and Cain 1975; Hyde et al. 2013). Asexual morph: Undetermined.
Type species: Delitschia didyma Auersw.
Notes: Delitschia is characterized by usually fimicolous habit, with bitunicate asci, and pigmented, 1-septate ascospores, with an elongate germ slit in each cell (Luck-Allen and Cain 1975). Most taxa of this genus are coprophilous (Luck-Allen and Cain 1975), some are wood-inhabiting (Eaton and Jones 1970; Hyde and Steinke 1996) and three species were reported from freshwater habitats (see list below). It is reasonable to infer that the lignicolous freshwater taxa might phylogenetically separate from the coprophilous taxa. This cannot be confirmed until sequences of three freshwater species are available. Delitschia fasciatispora K.D. Hyde and D. palmietensis K.D. Hyde & Steinke have 8-spored asci, while they are 2-spored in D. bispora Eaton & E.B.G. Jones.
List of freshwater Delitschia species
Delitschia bispora Eaton & E.B.G. Jones, Nova Hedwigia 19(3–4): 781 (1971) [1970]
Freshwater distribution: England (Eaton and Jones 1970; Eaton and Jones 1971; Eaton 1972)
Delitschia fasciatispora K.D. Hyde, Mycoscience 37(1): 100 (1996)
Freshwater distribution: Mauritius (Hyde and Steinke 1996)
Delitschia palmietensis K.D. Hyde & Steinke, Mycoscience 37(1): 101 (1996)
Freshwater distribution: Mauritius (Hyde and Steinke 1996)
Key to freshwater Delitschia species
-
1.
Asci 2-spored………D. bispora
-
1.
Asci 8-spored………2
-
2.
Ascospores with a wide dark brown central band………D. fasciatispora
-
2.
Ascospores lack above characters………D. palmietensis
Dictyosporiaceae Boonmee & K.D. Hyde, Fungal Diversity 80: 462 (2016)
Key to sexual genera of freshwater Dictyosporiaceae species
-
1.
Ascomata somewhat soft, collapsing when dry, with hyphomycetous asexual morph………Dictyosporium
-
1.
Ascomata not as above, with coelomycetous asexual morph………Pseudocoleophoma
Key to asexual genera of freshwater Dictyosporiaceae species
-
1.
Coelomycetous………Pseudocoleophoma
-
1.
Hyphomycetous………2
-
2.
Conidiomata synnemata………Aquaticheirospora
-
2.
Conidiomata sporodochia………3
-
3.
Conidia non-cheiroid………Dendryphiella
-
3.
Conidia cheiroid………4
-
4.
Conidiophores form distinct sterile branches………Cheirosporium
-
4.
Conidiophores with no sterile branches………5
-
5.
Conidia with divergent arms………6
-
5.
Conidia with compacted arms………7
-
6.
Conidiophores composed of moniliform hyphae………Digitodesmium
-
6.
Conidiophores not as above………Jalapriya
-
7.
Conidia complanate………Dictyosporium
-
7.
Conidia non-complanate………8
-
8.
Conidia with basal hyaline cell………Aquadictyospora
-
8.
Conidia not as above………9
-
9.
Conidial arms mostly curved towards tip………Dictyocheirospora
-
9.
Conidial arms mostly parallel………10
-
10.
Conidia elongated subcylindrical………Vikalpa
-
10.
Conidia mostly ellipsoidal………Pseudodictyosporium
Aquadictyospora Z.L. Luo, K.D. Hyde & H.Y. Su, Mycosphere 8(10): 1590 (2017)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Conidiomata on natural substratum sporodochial, superficial, compact, scattered, circular or subglobose, dark brown to black, velvety. Mycelium immersed, consisted of septate, hyaline hyphae. Conidiophores reduced to conidiogenous cells. Conidiogenous cells holoblastic, monoblastic. Conidia ellipsoidal to broadly clavate, composed of medium brown, appressed cells, rounded and brown at the apex, oval to subglobose and hyaline at the base, muriform, cheiroid, non-complanate, without appendages (Li et al. 2017a).
Type species: Aquadictyospora lignicola Z.L. Luo, W.L. Li, K.D. Hyde & H.Y. Su
Notes: The monotypic genus Aquadictyospora was introduced to accommodate a freshwater species A. lignicola collected from China (Li et al. 2017b; Bao et al. 2018). Aquadictyospora differs from other genera in Dictyosporiaceae by its basal hyaline cell and conidia without appendages (Li et al. 2017b; Bao et al. 2018). Aquadictyospora nested in Dictyosporiaceae with high bootstrap support (Li et al. 2017b; this study, Fig. 47).
List of freshwater Aquadictyospora species
*Aquadictyospora lignicola Z.L. Luo, W.L. Li, K.D. Hyde & H.Y. Su, Mycosphere 8(10): 1591 (2017); Fig. 38
Freshwater distribution: China (Li et al. 2017)
Aquaticheirospora Kodsueb & W. H. Ho, J. Linn. Soc., Bot. 155: 286 (2007)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Hyphomycetous. Conidiomata synnema, scattered or gregarious, erect, brown. Mycelium immersed in the substratum, hyaline to pale brown. Conidiogenous cells holoblastic, monoblastic, integrated, terminal, determinate, oblong, hyaline to pale brown. Conidia acrogenous, solitary, non-complanate, hyaline to brown, cheiroid, euseptate, arms vertically inserted in different planes, on a basal cell; basal cells pale brown, cuneiform, smooth, thin-walled; arms discrete, mostly divergent, cylindrical (Kodsueb et al. 2007).
Type species: Aquaticheirospora lignicola Kodsueb & W.H. Ho
Notes: The monotypic genus Aquaticheirospora is distinguished from other cheirosporous genera by synnematous conidiomata and acrogenous, euseptate, cheiroid conidia with divergent arms (Kodsueb et al. 2007). The synnematous conidiomata were thought to be not important to delimit a separated genus because the type species A. lignicola nested amongst Dictyosporium based on ITS sequence data (Cai et al. 2008). However, Boonmee et al. (2016) demonstrated that Aquaticheirospora was a morphologically and phylogenetically well-separated genus based on multigene phylogenetic analyses.
Aquaticheirospora lignicola has 3(–5) tightly packed arms on the substrate, but has (3–)5(–10) divergent arms with a brown vacuole in culture (Kodsueb et al. 2007).
List of freshwater Aquaticheirospora species
*Aquaticheirospora lignicola Kodsueb & W. H. Ho, J. Linn. Soc., Bot. 155: 286 (2007); Fig. 39
Freshwater distribution: Thailand (Kodsueb et al. 2007)
Cheirosporium L. Cai & K.D. Hyde, Persoonia 20: 55 (2008)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Conidiomata sporodochial, scattered, punctiform, brown to black. Mycelium immersed or partly superficial, consisted of branched, septate, subhyaline to pale brown hyphae. Conidiophores semi-macronematous to macronematous, mononematous, flexuous, septate, unevenly branched, branches sterile or fertile; branches with an elongate, relatively enlarged, obclavate cell. Conidiogenous cells holoblastic, monoblastic, terminal, determinate. Conidia acrogenous, cheiroid, olivaceous to brown, solitary, dry, smooth-walled (Cai et al. 2008).
Type species: Cheirosporium triseriale L. Cai & K.D. Hyde
Notes: Cheirosporium differs from other genera in Dictyosporiaceae by its semi-macronematous to macronematous, branched conidiophores with sterile or fertile branches, on which grow an elongate, relatively enlarged, obclavate cell (Cai et al. 2008). Two species are listed in Index Fungorum (2020) and both are from freshwater habitats (Cai et al. 2008). Cheirosporium vesiculare Abdel-Aziz, with only LSU sequence deposited in GenBank, clustered with the type species C. triseriale with low bootstrap support in Abdel-Aziz (2016b) and they are unrelated in our phylogenetic analysis (data not shown). Cheirosporium triseriale has punctiform sporodochia, complanate conidia with 1–2 cells per row, without appendages, while C. vesiculare has compact sporodochia, non-complanate conidia with 9–12 cells per row and with 2 to 5 large, globose to subglobose appendages (Cai et al. 2008; Abdel-Aziz 2016b). The conidial length are also considerably different (see key below). The phylogenetic relationships of two species need further study.
List of freshwater Cheirosporium species
*Cheirosporium triseriale L. Cai & K.D. Hyde, Persoonia 20: 56 (2008)
Freshwater distribution: Yunnan, China (Cai et al. 2008)
*Cheirosporium vesiculare Abdel-Aziz, Mycosphere 7(4): 450 (2016)
Freshwater distribution: Egypt (Abdel-Aziz 2016b)
Key to freshwater Cheirosporium species
-
1.
Conidia 15–25 × 11–15 µm………C. triseriale
-
1.
Conidia 42–65 × 19–22 μm………C. vesiculare
Dendryphiella Bubák & Ranoj., Annls mycol. 12(4): 417 (1914)
Saprobic on dead branch, living leaves, leaf litter, dead or old herbaceous stems in terrestrial or submerged wood in freshwater habitats. Sexual morph: Undetermined. Asexual morph: Colonies effuse, rubiginous, brown or black, hairy or velvety. Mycelium mostly immersed. Conidiophores macronematous, mononematous, evenly or irregularly branched, with terminal or intercalary nodose swellings, mid to dark brown or reddish brown, smooth or verruculose. Conidiogenous cells polytretic, integrated, sympodial, reddish brown to pale brown, subspherical or clavate to subcylindrical, cicatrized, covered with some conidiogenous loci. Conidia solitary or catenate, acropleurogenous, simple, cylindrical or oblong, pale brown to mid brown, burnt sienna or olivaceous brown, septate, smooth or verruculose (Ellis 1971).
Type species: Dendryphiella vinosa (Berk. & M.A. Curtis) Reisinger
Notes: Dendryphiella was introduced by Ranojevic (1914) with the type species D. interseminata (Berk. & Ravenel) Bubák which was later synonymized as D. vinosum (Matsushima 1971). Fifteen species are accepted in the genus and six of which have sequence data (Crous et al. 2014, 2016; Liu et al. 2017c; Hyde et al. 2018a; Iturrieta-González et al. 2018). Taxonomic notes and a key to Dendryphiella species were provided by Liu et al. (2017c). Dendryphiella has non-cheiroida conidia which are similar to Neodendryphiella Iturrieta-González et al., but differ in having up to ten conidia in a chain. These two genera separated well in a phylogenetic tree (Iturrieta-González et al. 2018). All Dendryphiella species were collected from terrestrial habitats, except our new collection D. vinosa is collected from freshwater habitats.
List of freshwater Dendryphiella species
*Dendryphiella vinosa (Berk. & M.A. Curtis) Reisinger, Bull. trimest. Soc. mycol. Fr. 84(1): 27 (1968)
Facesoffungi number: FoF08673; Fig. 40
Basionym: Helminthosporium vinosum Berk. & M.A. Curtis [as ‘Helmisporium’], in Berkeley, J. Linn. Soc., Bot. 10(no. 46): 361 (1868) [1869]
Synonymy: Dendryphiella phitsanulokensis N.G. Liu & K.D. Hyde, Mycosphere 9(2): 287 (2018)
Freshwater Distribution: Thailand (this study)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies on natural substrate superficial, effuse, greyish-brown to black. Mycelium partly immersed, partly superficial, composed of septate, pale brown, smooth hyphae. Conidiophores uneven in width, 160–300 × 4–6 µm (\( {\bar{\text{x}}} \) = 235 × 5 µm, n = 10), macronematous, mononematous, occasionally fasciculate, branched at upper part, slightly wider at nodes, 8–10 µm diam., septate, slightly constricted at the septa, brown to reddish brown, sometimes gradually paler and tapering at tip, smooth or delicately verruculose. Conidiogenous cells 35–40 × 3–5 µm (\( {\bar{\text{x}}} \) = 37 × 4 µm, n = 5), polytretic, terminal or intercalary, integrated, proliferating symmetrically or asymmetrically, smooth, subcylindrical, covered with 1–2 conidiogenous loci, brown to reddish brown. Conidia 23–34 × 5–8 µm (\( {\bar{\text{x}}} \) = 27 × 6.5 µm, n = 15), solitary, acrogenous or pleurogenous, oblong with obtuse ends, 3-septate, slightly constricted at the septa, brown to reddish brown, darker at the hilum, simple, dry, smooth or delicately verruculose, thin-walled.
Culture characteristics: On PDA, colony circular, reaching 40 mm in 15 days at 25 °C, pale yellow-brown to white from above, yellow-brown from below, surface rough, with dense mycelium in the middle, sparse mycelium in outer layer, dry, raised, edge entire.
Material examined: THAILAND, Phayao Province, on submerged wood in a stream, 4 August 2017, G.N. Wang, G19 (MFLU 17-1666), ex-type living culture MFLUCC 17-2321.
Notes: Dendryphiella vinosa was initially collected from dead stems of Congo Bean in Cuba (Berkeley and Curtis 1869). Ellis (1971) redescribed and illustrated D. vinosa with reddish brown, verruculose conidiophores and 3-septate, verruculose, pale brown to reddish brown conidia. Dendryphiella vinosa only has LSU (EU848590) and ITS (DQ307316) sequence data in GenBank, which have been proved in following phylogenetic analyses (Crous et al. 2016, 2019; Liu et al. 2017c; Hyde et al. 2018a). Hyde et al. (2018a) introduced a new species D. phitsanulokensis N.G. Liu & K.D. Hyde, which differs from D. vinosa in having shorter and unbranched conidiophores. However, they have identical LSU sequence data and there are only one nucleotide differences in ITS sequence data between D. phitsanulokensis (MFLUCC 17-2513) and D. vinosa (NBRC 32669). Further morphological comparison shows that D. phitsanulokensis has identical characters with D. vinosa in all structures (Ellis 1971; Hyde et al. 2018a), and we consider that the conidiophore length and branch of D. vinosa can be variable in different living habitats. Based on single gene comparison, phylogenetic analysis (Fig. 47) and morphological comparison, we synonymize D. phitsanulokensis with D. vinosa.
Our new collection MFLUCC 17-2321 clusters with D. vinosa in our multigene phylogenetic analysis (Fig. 47). They have identical LSU sequence data and there are only one nucleotide differences in ITS sequence data between MFLUCC 17-2321 and D. vinosa MFLUCC 17-2513. Our collection MFLUCC 17-2321 is very similar to D. vinosa MFLUCC 17-2513 in all morphological characters and they have overlapping size of conidiophores (160–300 µm long vs. 130–260 µm long) and conidia (23–34 × 5–8 µm vs. 16–26 × 2.5–4.4 µm) (Hyde et al. 2018a). We observed branched conidiophores in our collection, which are present in Ellis (1971) but absent in Hyde et al. (2018a). We identify MFLUCC 17-2321 as D. vinosa based on phylogenetic analysis (Fig. 47) and their very similar morphology. This is a new habitat record of D. vinosa from freshwater in Thailand.
Dictyocheirospora M.J. D’souza, Boonmee & K.D. Hyde, Fungal Diversity 80: 465 (2016)
Saprobic on decaying wood in freshwater and terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Hyphomycetous. Conidiomata on natural substrate sporodochial, punctiform, dark brown. Mycelium immersed, consisting of branched, septate, subhyaline to pale brown hyphae. Conidiophores micronematous or semi-macronematous, septate, hyaline to pale brown, smooth. Conidiogenous cells holoblastic, integrated, terminal, determinate, doliiform to cylindrical. Conidia acrogenous, solitary, dry, cheiroid, pale brown, complanate or non-complanate, euseptate or distoseptate, smooth-walled (Boonmee et al. 2016).
Type species: Dictyocheirospora rotunda M.J. D’souza, Bhat & K.D. Hyde
Notes: Dictyocheirospora was introduced for the species producing dark sporodochial colonies with aeroaquatic cheiroid dictyospores (Boonmee et al. 2016). Many new species and combinations were reported in the genus (Yang et al. 2018), and 21 species are listed in Index Fungorum (2020). Nine of them are from freshwater habitats, mostly in China and Thailand (see list below).
List of freshwater Dictyocheirospora species
*Dictyocheirospora aquadulcis Sorvongxay, S. Boonmee & K.D Hyde, Fungal Diversity 96: 23 (2019)
Freshwater distribution: Thailand (Hyde et al. 2019)
*Dictyocheirospora aquatica Z.L. Luo, Bhat & K.D. Hyde, Mycosphere 7(9): 1361 (2017)
Freshwater distribution: China (Wang et al. 2016)
*Dictyocheirospora garethjonesii Z.L. Luo, H.Y. Su & K.D. Hyde, Mycosphere 7(9): 1361 (2017)
Freshwater distribution: China (Wang et al. 2016)
*Dictyocheirospora gigantica (Goh & K.D. Hyde) M.J. D’souza, Boonmee & K.D. Hyde, Fungal Diversity 80: 469 (2016)
Freshwater distribution: KwaZulu-Natal (Goh et al. 1999)
*Dictyocheirospora indica (I.B. Prasher & R.K. Verma) J. Yang & K.D. Hyde, MycoKeys 36: 90 (2018)
Freshwater distribution: Thailand (Yang et al. 2018)
*Dictyocheirospora rotunda M.J. D’souza, Bhat & K.D. Hyde, Fungal Diversity 80: 465 (2016); Fig. 41
Freshwater distribution: China (Wang et al. 2016; this study), Thailand (Boonmee et al. 2016)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Hyphomycetous. Conidiomata sporodochial, punctiform, velvety, black. Mycelium mostly immersed. Conidiophores micronematous, reduced. Conidiogenous cells holoblastic, monoblastic, integrated, terminal, determinate, pale brown, smooth-walled. Conidia 50–62 × 19–25 µm (\( {\bar{\text{x}}} \) = 56 × 22 µm, n = 15), solitary, acrogenous, cheiroid, pale brown to dark brown, consisting of 4–6 rows of cells, rows digitate, cylindrical to narrowly clavate, inwardly curved at the apex, with a subglobose, cuneiform basal cell, each arm composed of 10–12 cells, septate, constricted at septa.
Culture characteristics: On PDA, colony circular, reaching 50 mm in 25 days at 25 °C, grey to brown from above, black from below, surface rough, with dense mycelium, produced conidia in culture after 10 days, dry, raised, edge entire.
Material examined: CHINA, Yunnan Province, Kunming University of Science & Technology, on submerged wood in a stream, 10 May 2017, C.X. Liu, L13 (HKAS 102143), living culture KUMCC 19-0103; ibid., Qujing, on submerged wood in a stream, 10 May 2017, W. Dong, L40 (HKAS 102146), living culture KUMCC 19-0105.
Notes: Our two new collections KUMCC 19-0103 and KUMCC 19-0105 have slightly thinner conidia (50–62 × 19–25 µm vs. 42–58 × 19–38 μm) than the holotype in Thailand (Boonmee et al. 2016). Two collections cluster with D. rotunda with high bootstrap support (Fig. 47).
*Dictyocheirospora tetraploides (L. Cai & K.D. Hyde) J. Yang & K.D. Hyde, MycoKeys 36: 93 (2018)
Freshwater distribution: China (Cai et al. 2003b)
*Dictyocheirospora thailandica X.D. Yu, W. Dong & H. Zhang, sp. nov.
Index Fungorum number: IF557908; Facesoffungi number: FoF09251; Fig. 42
Etymology: referring to Thailand, where the holotype was collected
Holotype: MFLU 18-0999
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Hyphomycetous. Conidiomata sporodochial, punctiform, black. Mycelium mostly immersed, composed of pale brown, thin-walled hyphae. Conidiophores micronematous, reduced. Conidiogenous cells holoblastic, monoblastic, integrated, terminal, determinate, hyaline to subhyaline, smooth-walled. Conidia 42–65 × 20–45 µm (\( {\bar{\text{x}}} \) = 51 × 27 µm, n = 15), solitary, acrogenous, cheiroid, non-complanate, pale brown to dark brown, consisting of 6–7 rows of cells, rows compacted, inwardly curved at the apex, easily become divergent and digitate when in water, broadly clavate, with a subglobose or cuneiform basal cell, each arm subcylindrical to narrowly clavate, 7–7.5 µm wide, composed of 9–12 cells, 8–11-septate, constricted at the septa, without appendages or sheaths.
Culture characteristics: On PDA, colony circular, reaching 40 mm in 45 days at 25 °C, pale yellow to grey from above, dark brown from below, surface rough, with dense mycelium, dry, raised, edge undulate to filiform.
Material examined: THAILAND, Phayao Province, on submerged wood in a stream, 23 February 2018, X.D. Yu, Y21 (MFLU 18-0999, holotype), ex-type living culture MFLUCC 18-0987.
Notes: Dictyocheirospora thailandica clusters with D. taiwanense Tennakoon et al. with low bootstrap support (Fig. 47). Morphologically, they are entirely different species. Dictyocheirospora thailandica has broadly clavate conidia which easily become divergent and digitate when in water, while D. taiwanense has narrowly cylindrical conidia comprising of tightly compacted arms (Hyde et al. 2019). In addition, D. thailandica has shorter and wider conidia (42–65 × 20–45 µm vs. (72–)74–84(–86) × 16–20(–24) µm) with a higher number of conidial rows (6–7 vs. 5) than D. taiwanense (Hyde et al. 2019). Unfortunately, D. taiwanense only has LSU and ITS sequence data in GenBank, which show two and three nucleotide differences between D. thailandica (MFLUCC 18-0987) and D. taiwanense (MFLUCC 17-2654), respectively. No other genes can be compared. Based on the very distinct morphology, we introduce D. thailandica as a new species in Dictyocheirospora. We believe that D. thailandica and D. taiwanense will be separated clearly in the phylogenetic tree with protein coding genes added in future.
*Dictyocheirospora vinaya M.J. D’souza, Bhat & K.D. Hyde, Fungal Diversity 80: 467 (2016)
Freshwater distribution: Thailand (Boonmee et al. 2016)
Key to freshwater Dictyocheirospora species
-
1.
Conidia with appendage………2
-
1.
Conidia without appendages………3
-
2.
Conidial appendage 5–13 × 5–7 μm………D. indica
-
2.
Conidial appendage 10–25 × 5–10 μm………D. tetraploides
-
3.
Conidial rows closely compacted, become divergent when squashed………4
-
3.
Conidial rows not as above………5
-
4.
Conidia 58–67 × 15.5–26.5 μm………D. vinaya
-
4.
Conidia 42–65 × 20–45 µm………D. thailandica
-
5.
Conidial rows composed of > 20 cells………D. gigantica
-
5.
Conidial rows composed of < 20 cells………6
-
6.
Conidia > 60 μm long………D. aquadulcis
-
6.
Conidia < 60 μm long………7
-
7.
Conidial arm composed of up to 12 cells………D. rotunda
-
7.
Conidial arm composed of 7–10 cells………8
-
8.
Conidia 34–42 × 12.5–19.5 μm………D. aquatica
-
8.
Conidia 45.5–54.5 × 15.5–24.5 μm………D. garethjonesii
Dictyosporium Corda, Weitenweber’s Beitr. Nat.: 87 (1836)
Saprobic on decaying wood and plant debris in terrestrial and freshwater habitats. Sexual morph: Ascomata perithecial, superficial, solitary or scattered, globose to subglobose, dark brown to black, collapsed when dry, ostiolate. Peridium membranaceous, composed of several layers of dark brown, small cells of textura angularis or textura epidermoidea. Pseudoparaphyses numerous, cellular, subcylindrical, hyaline, septate. Asci bitunicate, fissitunicate, clavate to cylindrical or saccate, pedicellate, apically rounded with an ocular chamber. Ascospores biseriate, fusiform, elongated-ellipsoid, septate, hyaline, with or without mucilaginous sheath (Boonmee et al. 2016). Asexual morph: Hyphomycetous. Colonies punctiform, sporodochial, effuse or compact, olive, brown to black, glistening, with immersed mycelium. Conidiophores micronematous, mononematous, flexuous, irregularly branched, hyaline to brown, smooth, sometimes reduced to conidiogenous cells. Conidiogenous cells holoblastic, monoblastic, integrated, terminal or sometimes intercalary, determinate, cylindrical, doliiform, spherical or subspherical, hyaline to pale brown. Conidia solitary, dry, acrogenous or sometimes pleurogenous, cheiroid, complanate, olive to brown, smooth, multiseptate (Boonmee et al. 2016).
Type species: Dictyosporium elegans Corda
Notes: Dictyosporium was introduced for asexual species producing punctiform, sporodochial colonies and cheiroid, complanate conidia. The sexual morph D. meiosporum Boonmee & K.D. Hyde and D. sexualis Boonmee & K.D. Hyde were reported based on phylogenetic analysis (Liu et al. 2015). Nineteen freshwater Dictyosporium species are accepted in the genus, and 11 species are confirmed with molecular data. Dictyosporium species can be distinguished by the conidial size, appendage, sheath and rows (see key below).
List of freshwater Dictyosporium species
*Dictyosporium aquaticum Abdel-Aziz, Fungal Diversity 72: 72 (2015)
Freshwater distribution: Egypt (Liu et al. 2015)
Dictyosporium biseriale D.M. Hu, L. Cai & K.D. Hyde, Sydowia 62(2): 197 (2010)
Freshwater distribution: Yunnan, China (Hu et al. 2010a)
Dictyosporium canisporum L. Cai & K.D. Hyde, Sydowia 55(2): 130 (2003)
Freshwater distribution: Yunnan, China (Cai et al. 2003b)
*Dictyosporium digitatum J.L. Chen, C.H. Hwang & Tzean, Mycol. Res. 95(9): 1145 (1991)
Freshwater distribution: Australia (Goh et al. 1999), Brunei (Goh et al. 1999), China (Goh et al. 1999; Tsui et al. 2000, 2001b), Thailand (Sivichai et al. 2002)
Dictyosporium lakefuxianense L. Cai, K.D. Hyde & McKenzie [as ‘lakefuxianensis’], Cryptog. Mycol. 24(1): 5 (2003)
Freshwater distribution: Yunnan, China (Cai et al. 2003c)
*Dictyosporium nigroapice Goh, W.H. Ho & K.D. Hyde, in Goh, Hyde & Yanna, Fungal Diversity 103(1): 83 (1999)
Freshwater distribution: Hong Kong, China (Goh et al. 1999; Sivichai et al. 2002; Yang et al. 2018)
*Dictyosporium olivaceosporum Kaz. Tanaka, K. Hiray., Boonmee & K.D. Hyde, Fungal Diversity 80: 474 (2016)
Freshwater distribution: Japan (Boonmee et al. 2016)
*Dictyosporium palmae Abdel-Aziz, Mycosphere 7(4): [453] (2016)
Freshwater distribution: Egypt (Abdel-Aziz 2016b)
Dictyosporium pelagicum (Linder) G.C. Hughes ex E.B.G. Jones [as ‘pelagica’], Trans. Br. mycol. Soc. 46(1): 137 (1963)
Freshwater distribution: USA (Shearer 1972)
Dictyosporium polystichum (Höhn.) Damon, Lloydia 15: 118 (1952)
Freshwater distribution: Yunnan, China (Luo et al. 2004)
*Dictyosporium stellatum G.P. White & Seifert, Persoonia 26: 156 (2011)
Freshwater distribution: Ontario (Crous et al. 2011)
Dictyosporium tetraseriale Goh, Yanna & K.D. Hyde, Fungal Diversity 103(1): 87 (1999)
Freshwater distribution: Brunei (Goh et al. 1999), Hong Kong, China (Goh et al. 1999)
*Dictyosporium tetrasporum L. Cai & K.D. Hyde, Mycoscience 48(5): 290 (2007)
Freshwater distribution: Yunnan, China (Cai and Hyde 2007a)
*Dictyosporium thailandicum M.J. D’souza, Bhat & K.D. Hyde, Fungal Diversity 72: 78 (2015)
Freshwater distribution: Thailand (Liu et al. 2015)
*Dictyosporium tratense J. Yang & K.D. Hyde, MycoKeys 36: 96 (2018)
Freshwater distribution: Thailand (Yang et al. 2018)
Dictyosporium triramosum Aramb., Cabello & Cazau, Mycotaxon 78: 185 (2001)
Freshwater distribution: Buenos Aires (Arambarri 2001)
*Dictyosporium tubulatum J. Yang, K.D. Hyde & Z.Y. Liu, MycoKeys 36: 94 (2018)
Freshwater distribution: Thailand (Yang et al. 2018)
Dictyosporium yunnanense L. Cai, K.D. Hyde & McKenzie [as ‘yunnanensis’], Cryptog. Mycol. 24(1): 7 (2003)
Freshwater distribution: Yunnan, China (Cai et al. 2003c)
*Dictyosporium zhejiangense Wongs., H.K. Wang, K.D. Hyde & F.C. Lin, Cryptog. Mycol. 30(4): 358 (2009)
Freshwater distribution: Zhejiang, China (Wongsawas et al. 2009)
Key to freshwater Dictyosporium species (only species confirmed with molecular data)
-
1.
Conidia without appendages………2
-
1.
Conidia with appendage………3
-
2.
Conidia (50–)95–140(–175) μm × (27.5–)30–40(–52.5) μm………D. stellatum
-
2.
Conidia 23.5–40 μm × 16–21.5 μm………D. tetrasporum
-
3.
Conidia with sheath………4
-
3.
Conidia without sheath………5
-
4.
Conidia 60–85 μm × 20–30 μm………D. aquaticum
-
4.
Conidia (40–)43–54(–57) μm × (20–)23–32(–36) μm………D. tratense
-
5.
Conidia with two types of appendages………D. palmae
-
5.
Conidia with one type of appendage………6
-
6.
Conidia > 45 μm long………D. digitatum
-
6.
Conidia < 45 μm long………7
-
7.
Conidia not complanate………D. olivaceosporum
-
7.
Conidia complanate………8
-
8.
Conidia consist of five rows of cells………9
-
8.
Conidia mostly consist of four rows of cells………10
-
9.
Appendages variable in shape………D. zhejiangense
-
9.
Appendages tubular………D. thailandicum
-
10.
Conidial appendage 22–34 × 4–5 μm………D. nigroapice
-
10.
Conidial appendage 19–24 × 3.5–7 μm………D. tubulatum
Digitodesmium P. M. Kirk, Trans. Br. mycol. Soc. 77: 284 (1981)
Saprobic on submerged bamboo, wood in freshwater or decaying wood, soil in terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Hyphomycetous. Conidiomata sporodochial, punctiform, pulvinate, scattered, pale brown to brown. Mycelium mostly immersed, composed of branched, septate, thin-walled, smooth, pale brown hyphae. Conidiophores semi-macronematous, mononematous, fasciculate, composed of moniliform, pale brown, septate, smooth hyphae. Conidiogenous cells holoblastic, monoblastic, integrated, terminal, determinate, globose to doliiform, minutely cicatrized. Conidia acrogenous, solitary, dry, digitate, cheiroid, slightly divergent arms, euseptate, some with a hyaline gelatinous cap at the apex (Kirk 1981; Boonmee et al. 2016).
Type species: Digitodesmium elegans P.M. Kirk
Notes: Digitodesmium is unique by its digitate conidia and moniliform conidiophores (Kirk 1981; Boonmee et al. 2016). Tsui et al. (2006a) indicated that Digitodesmium might be a synonym of Dictyosporium because the phylogenetic position of Digitodesmium was within Dictyosporium, but with low bootstrap support. A similar result was shown in Cai et al. (2008). Digitodesmium was distinguished from Dictyosporium by its divergent conidial arms which were considered as an artificial feature by Tsui et al. (2006a) and Cai et al. (2008). Boonmee et al. (2016) introduced family Dictyosporiaceae to accommodate most cheirosporous hyphomycete genera and accepted Digitodesmium as a distinct genus based on multigene phylogenetic analyses. We think that the moniliform conidiophores of Digitodesmium are also important to distinguish this genus.
Three freshwater Digitodesmium species morphologically fit well with the generic concept of Digitodesmium in producing divergent conidial arms (Ho et al. 1999; Cai et al. 2002b, 2003b). The placement of D. heptasporum L. Cai & K. D. Hyde and D. recurvum W. H. Ho et al. needs to be confirmed with molecular data.
List of freshwater Digitodesmium species
*Digitodesmium bambusicola L. Cai, K. Q. Zhang, McKenzie, W. H. Ho & K. D. Hyde, Nova Hedwigia 75: 528 (2002); Fig. 43d
Freshwater distribution: Philippines (Cai et al. 2002b)
Digitodesmium heptasporum L. Cai & K. D. Hyde, Sydowia 55: 133 (2003)
Freshwater distribution: Yunnan, China (Cai et al. 2003b)
Digitodesmium recurvum W. H. Ho, K. D. Hyde & Hodgkiss, Mycologia 91: 900 (1999); Fig. 43a–c
Freshwater distribution: China (Ho et al. 1999)
Key to freshwater Digitodesmium species
-
1.
Conidia with appendage………D. bambusicola
-
1.
Conidia without appendages………2
-
2.
Conidia 30–45 × 12–21 μm………D. recurvum
-
2.
Conidia 50–75 × 32.5–70 μm………D. heptasporum
Pseudocoleophoma Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 89 (2015)
Saprobic on decaying pod, leaves, stems and submerged wood. Sexual morph: Ascomata scattered or gregarious, immersed to erumpent, globose to subglobose, ostiolate. Ostiolar neck central, composed of subglobose, dark brown cells. Peridium composed of several layers of polygonal to rectangular cells. Pseudoparaphyses numerous, cellular, hypha-like, septate, branched, anastomosing. Asci 8-spored, bitunicate, fissitunicate, cylindrical to clavate, short pedicellate. Ascospores fusiform, septate, smooth, with a conspicuous, mucilaginous sheath (Tanaka et al. 2015). Asexual morph: Coelomycetous. Conidiomata immersed to erumpent, subglobose. Ostiolar neck well-developed, cylindrical, central. Peridium composed of several layers of slightly thick-walled, pale brown, polygonal to subglobose cells. Conidiophores absent. Conidiogenous cells enteroblastic, phialidic, doliiform to lageniform. Conidia cylindrical, hyaline, aseptate or septate, smooth (Tanaka et al. 2015).
Type species: Pseudocoleophoma calamagrostidis Kaz. Tanaka & K. Hiray.
Notes: Pseudocoleophoma is characterized by fusiform, septate ascospores with a conspicuous sheath and coleophoma-like conidia (Tanaka et al. 2015). Pseudocoleophoma was placed in Dictyosporiaceae based on molecular data (Tanaka et al. 2015; Boonmee et al. 2016; Yang et al. 2018). Four species are listed in Index Fungorum (2020). Pseudocoleophoma typhicola Kamolhan et al. (Hyde et al. 2016b) is known from only an asexual morph, while the other species have both sexual and asexual morphs. Pseudocoleophoma typhicola is the only species producing septate conidia (Tanaka et al. 2015; Hyde et al. 2016b; Jayasiri et al. 2019).
List of freshwater Pseudocoleophoma species
*Pseudocoleophoma typhicola Kamolhan, Banmai, Boonmee, E.B.G. Jones & K.D. Hyde, Fungal Diversity 80: 34 (2016)
Freshwater distribution: UK (Hyde et al. 2016b)
Jalapriya M.J. D’souza, H.Y. Su, Z.L. Luo & K.D. Hyde, Fungal Diversity 80: 476 (2016)
Saprobic on decaying wood in freshwater or terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Hyphomycetous. Colonies effuse, dark brown to black. Mycelium immersed or partly superficial, consisting of branched, septate, smooth, subhyaline to pale brown hyphae. Conidiophores micronematous, unbranched, thin-walled, smooth, cylindrical. Conidiogenous cells holoblastic, integrated, determinate, terminal. Conidia acrogenous, solitary, cheiroid, complanate or non-complanate, smooth-walled, euseptate, with 5–7 rows of cells, rows converging or divergent at the apex, apical cells with or without appendages (Boonmee et al. 2016).
Type species: Jalapriya pulchra M.J. D’souza, H.Y. Su, Z.L. Luo & K.D. Hyde
Notes: Jalapriya was introduced to accommodate a new freshwater species J. pulchra and two new combinations of species from terrestrial habitats (Boonmee et al. 2016). The cheirosporous genera are morphologically very similar in the family and Jalapriya was established based on multigene phylogenetic analyses (Boonmee et al. 2016). Jalapriya pulchra is distinctive based on its complanate conidia with hyaline appendages on the apical cells.
List of freshwater Jalapriya species
*Jalapriya pulchra M.J. D’souza, H.Y. Su, Z.L. Luo & K.D. Hyde, Fungal Diversity 80: 477 (2016); Fig. 44
Freshwater distribution: China (Boonmee et al. 2016)
Pseudodictyosporium Matsush., Bull. natn. Sci. Mus., Tokyo, N.S. 14: 473 (1971)
Saprobic on rotten leaves or submerged wood. Sexual morph: Undetermined. Asexual morph: Hyphomycetous. Conidiomata on natural substratum sporodochial, superficial, punctiform to effuse, velvety, scattered to gregarious, pale brown to dark brown, olive. Conidiophores micronematous, aseptate, simple, hyaline to pale brown, smooth. Conidiogenous cells holoblastic, monoblastic, integrated, terminal, determinate, doliiform to cylindrical. Conidia acrogenous, solitary, dry, cheiroid, pale brown, smooth-walled, septate, composed of three rows of cells arising parallelly from a truncate basal cell, compactly, non-complanate, with or without appendages (Matsushima 1971; Li et al. 2017).
Type species: Pseudodictyosporium wauense Matsush.
Notes: Pseudodictyosporium wauense is a terrestrial species collected from New Guinea. It was re-collected from submerged wood in China and described as cheiroid conidia containing three parallel rows of cells arising from a basal cell (Li et al. 2017). The parallel rows of cells of Pseudodictyosporium are similar to Vikalpa, however, phylogeny separates them as distinct genera (Boonmee et al. 2016; Li et al. 2017; Yang et al. 2018).
List of freshwater Pseudodictyosporium species
*Pseudodictyosporium wauense Matsush., Bull. natn. Sci. Mus., Tokyo 14(3): 473 (1971); Fig. 45
Freshwater distribution: China (Li et al. 2017)
Vikalpa M.J. D’souza, Boonmee, Bhat & K.D. Hyde, Fungal Diversity 80: 479 (2016)
Saprobic on submerged wood in freshwater and decaying wood, leaves in terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Hyphomycetous. Conidiomata sporodochial, punctiform or effuse, scattered to gregarious, superficial, pale brown to dark brown, with or without a mucilage, inconspicuous covering. Mycelium immersed, composed of branched, septate, subhyaline to pale brown, smooth-walled hyphae. Conidiophores micronematous, aseptate, hyaline to pale brown. Conidiogenous cells holoblastic, integrated, terminal, determinate, cylindrical to doliiform. Conidia acrogenous, solitary, dry, cheiroid, pale brown, smooth-walled, euseptate or distoseptate, consisting of three rows of cells arised parallel on a truncate basal cell, closely compacted, non-complanate, with or without appendages (Boonmee et al. 2016).
Type species: Vikalpa australiensis (B. Sutton) M.J. D’souza, Boonmee & K.D. Hyde
Notes: Vikalpa was introduced for one new species and three new combinations transferred from Dictyosporium (Boonmee et al. 2016). Vikalpa has non-complanate conidia consisting of three rows of cells arising parallel on a truncate basal cell, while Dictyosporium has complanate conidia with several unparallel rows of cells (Boonmee et al. 2016). The placement of Vikalpa was unstable, as it clustered basal to Dictyosporium in Boonmee et al. (2016), but distant from Dictyosporium (Yang et al. 2018). The freshwater species V. lignicola M.J. D’souza et al. was introduced based on its 3 rows and non-complanate conidia, but without molecular evidence (Boonmee et al. 2016).
List of freshwater Vikalpa species
Vikalpa lignicola M.J. D’souza, Bhat, Hong Y. Su & K.D. Hyde, Fungal Diversity 80: 479 (2016); Fig. 46
Freshwater distribution: China (Boonmee et al. 2016)
Didymosphaeriaceae Munk, Dansk bot. Ark. 15(no. 2): 128 (1953)
Key to freshwater genera of Didymosphaeriaceae
-
1.
Ascomata with a pore-like opening………Didymosphaeria
-
1.
Ascomata without above character………2
-
2.
Asci cylindrical, ascospores broadly ellipsoidal, yellowish brown………Paraphaeosphaeria
-
2.
Asci elongate-clavate to sub-cylindrical, ascospores fusoid, hyaline or pale brown………Pseudotrichia
Didymosphaeria Fuckel, Jb. nassau. Ver. Naturk. 23-24: 140 (1870) [1869-70]
Saprobic on woody branches and herbaceous stems and leaves in freshwater or terrestrial habitats. Sexual morph: Ascomata solitary, scattered, or in small groups, immersed to erumpent, globose to ovoid, with ostiolate papilla. Ostiole with a pore-like opening, periphysate. Peridium one-layered, thin, composed of brown pseudoparenchymatous cells of textura intricata. Pseudoparaphyses dense, trabeculate, filiform, hyaline, indistinctly septate, anastomosing, mostly above the asci. Asci 8-spored, bitunicate, fissitunicate, cylindrical, with a furcated pedicel, apically rounded with an indistinct ocular chamber. Ascospores uniseriate, ellipsoidal, brown, 1-septate (Zhang et al. 2012b; Ariyawansa et al. 2014a). Asexual morph: Undetermined.
Type species: Didymosphaeria futilis (Berk. & Broome) Rehm
Notes: Didymosphaeria comprises over 520 epithets in Index Fungorum (2020). The type species D. futilis was examined by Ariyawansa et al. (2014a) who also introduced a new species D. rubi-ulmifolii Ariyaw. et al. based on immersed ascomata under clypeus with a single layered peridium and brown, 1-septate ascospores. Didymosphaeria represented by D. rubi-ulmifolii clustered with members of Didymosphaeriaceae (Liu et al. 2017a; this study, Fig. 2). The placement of Didymosphaeria futilis is questionable as two strains clustered in two different families (HKUCC 5834 in Cucurbitariaceae and CMW22186 in Didymellaceae) (Zhang et al. 2012b; Ariyawansa et al. 2014a). The freshwater species D. pittospora Udaiyan & Hosag. was proposed by Udaiyan and Hosagoudar (1991) but is an invalid name (Index Fungorum 2020) because the holotype was not indicated when introduced (Fig. 47).
List of freshwater Didymosphaeria species
Didymosphaeria pittospora Udaiyan & Hosag., J. Econ. Taxon. Bot. 15(3): 658 (1992) [1991]
Freshwater distribution: Tamil Nadu, India (Udaiyan and Hosagoudar 1991)
Paraphaeosphaeria O.E. Erikss., Ark. Bot., Ser. 2 6: 405 (1967)
Saprobic on various hosts in terrestrial and submerged wood in freshwater habitats. Sexual morph: Ascomata immersed to semi-immersed, depressed globose, with ostiolate papilla. Ostiole black, with a short neck, without periphyses. Peridium composed of several layers cells of textura prismatica. Pseudoparaphyses dense, trabeculate, filamentous, hyaline, septate. Asci 8-spored, bitunicate, fissitunicate, cylindrical with a short, broad pedicel. Ascospores uniseritate or partially overlapping, broadly ellipsoidal, yellowish-brown, septate, smooth, with a thin sheath (Ariyawansa et al. 2014b). Asexual morph: Coelomycetous. Conidiomata eustromatic or pycnidial. Conidiogenous cells discrete or integrated, phialidic or annellidic, with percurrent proliferations. Conidia variable in shape, subglobose, ellipsoid to obovoid-pyriform, or more cylindrical, aseptate or 1-septate, smooth to verrucose (Verkley et al. 2014).
Type species: Paraphaeosphaeria michotii (Westend.) O.E. Erikss.
Notes: Paraphaeosphaeria was confirmed in Didymosphaeriaceae based on molecular data derived from epitype of P. michotii (Ariyawansa et al. 2014b). The asexual morph of Paraphaeosphaeria was reported as coelomycetous species, e.g. P. angularis Verkley & Aa, P. arecacearum Verkley et al. and P. neglecta Verkley et al. (Verkley et al. 2014). Paraphaeosphaeria is quite comparable to Phaeosphaeria I. Miyake, but phylogeny places them in Didymosphaeriaceae and Phaeosphaeriaceae, respectively (Liu et al. 2017a).
Two freshwater species, Paraphaeosphaeria michotii and P. schoenoplecti M.K.M. Wong et al., are similar in having 2-septate, yellowish brown ascospores, but can be distinguished by ascospores shape (cylindrical vs. long fusiform) and size (see key below) (Wong et al. 2000).
List of freshwater Paraphaeosphaeria species
Paraphaeosphaeria michotii (Westend.) O.E. Erikss., Arch. Botan. 6: 405 (1967)
Basionym: Sphaeria michotii Westend., Bull. Acad. R. Sci. Belg., Cl. Sci., sér. 2 7(5): 87 (1859)
Synonymy: see Index Fungorum (2020)
Freshwater distribution: England (Pugh and Mulder 1971)
Paraphaeosphaeria schoenoplecti M.K.M. Wong, Goh & K.D. Hyde, Fungal Diversity 4: 172 (2000)
Freshwater distribution: Hong Kong, China (Wong et al. 2000)
Key to freshwater Paraphaeosphaeria species
-
1.
Ascospores (12–)16–24 × 4–5(–6) μm………P. michotii
-
1.
Ascospores 27–31 × 3.8–4 μm………P. schoenoplecti
Pseudotrichia Kirschst., Annls mycol. 37(1/2): 125 (1939)
Saprobic in terrestrial or rarely aquatic habitats. Sexual morph: Ascomata solitary or scattered, immersed to nearly superficial, globose to pyriform, carbonaceous or coriaceous, with ostiolate papilla. Peridium two-layered, comprising thick-walled cells of textura angularis, outer layer heavily pigmented, comprising small, dark brown to black cells, inner layer comprising lightly pigmented or hyaline cells. Pseudoparaphyses numerous, cellular, narrow, hyaline, septate, unbranched. Asci 8-spored, bitunicate, fissitunicate, elongate clavate to sub-cylindrical, with narrow, long, furcate pedicellate, apically rounded with a minute ocular chamber. Ascospores uni- or bi-seriate, fusoid, straight to curved, hyaline or pale brown, 1- to multiseptate, smooth-walled, thick-walled (Thambugala et al. 2014; Tian et al. 2015). Asexual morph: Undetermined.
Type species: Pseudotrichia stromatophila Kirschst.
Notes: Pseudotrichia was placed in Didymosphaeriaceae by Thambugala et al. (2014) based on re-examination of the holotype of P. stromatophila. Pseudotrichia was polyphyletic as shown in Tian et al. (2015) as one strain of P. guatopoensis Huhndorf formed an independent lineage in Pleosporales and two strains of P. mutabilis (Pers.) Wehm. clustered in Pleomassariaceae. The sequence data of the type species P. stromatophila and other Pseudotrichia species are needed to clarify the familial and generic status (Thambugala et al. 2014). Pseudotrichia allequashensis Fallah & Shearer differs from other species in the genus in having a narrow cylindric neck with a clypeus and hyaline ascospores with three eusepta and two distosepta (Huhndorf 1994; Fallah and Shearer 2001). However, the placement of P. allequashensis in Didymosphaeriaceae needs confirmation with molecular data.
List of freshwater Pseudotrichia species
Pseudotrichia allequashensis Fallah & Shearer, Mycologia 93(3): 597 (2001)
Freshwater distribution: USA (Fallah and Shearer 2001)
Key to freshwater Didymosphaeriaceae asexual genera
-
1.
Conidiogenous cells phialidic or annellidic, with percurrent proliferations………Paraphaeosphaeria
-
1.
Conidiogenous cells phialidic, sometimes percurrent………Paraconiothyrium
Paraconiothyrium Verkley, Stud. Mycol. 50(2): 327 (2004)
Saprobic on submerged wood in freshwater or plant materials in terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Conidiomata eustromatic, simple or complex, rarely pycnidial. Conidiogenous cells discrete or integrated, phialidic, sometimes percurrent. Conidia narrowly ellipsoidal or short-cylindrical, aseptate or sometimes 1-septate, thin-walled, smooth-walled or minutely warted, hyaline when young, brown when mature (Verkley et al. 2004).
Type species: Paraconiothyrium estuarinum Verkley & Manuela Silva
Notes: Paraconiothyrium was introduced to accommodate the mycoparasite P. minitans (W.A. Campb.) Verkley and the other four species (Verkley et al. 2004). Paraconiothyrium species are coelomycetous and regarded as asexual morph of Paraphaeosphaeria because they clustered in a well-supported clade (Verkley et al. 2004). However, they clustered in two different clades in the later study of Wanasinghe et al. (2018b) who mentioned that the sexual morph of Paraconiothyrium is undetermined, which was in agreement with Wijayawardene et al. (2017). Paraconiothyrium fuckelii (Sacc.) Verkley & Gruyter was found from freshwater habitats in USA (Shearer 1972), but not confirmed by molecular data. The name P. fuckelii is illegitimate (Index Fungorum 2020) according to code, Rejection of names article 52. 1.
List of freshwater Paraconiothyrium species
Paraconiothyrium fuckelii (Sacc.) Verkley & Gruyter, Stud. Mycol. 75: 25 (2012) [2013]
Basionym: Coniothyrium fuckelii Sacc., Fungi venet. nov. vel. Crit., Sér. 5: 200 (1878)
Synonymy: see Index Fungorum (2020)
Freshwater distribution: USA (Shearer 1972)
Latoruaceae Crous, IMA Fungus 6(1): 176 (2015)
Pseudoasteromassaria M. Matsum. & Kaz. Tanaka, Fungal Diversity 75: 77 (2015)
Saprobic on submerged wood or parasitic on twigs. Sexual morph: Ascomata scattered, immersed, subglobose, brown to black, ostiolate. Peridium two-layered. Pseudoparaphyses numerous, cellular, hyaline, septate, branched. Asci 8-spored, bitunicate, cylindrical to clavate, pedicellate. Ascospores bi- to tri-seriate, fusiform, brown, septate (Ariyawansa et al. 2015). Asexual morph: Coelomycetous. Conidiomata pycnidial, solitary or scattered, immersed or superficial, globose, ellipsoidal, conical, dark brown to black, ostiolate. Peridium two-layered. Conidiophores absent. Conidiogenous cells enteroblastic, phialidic, cylindrical or pyramidal, doliiform to ampulliform. Conidia variable in shape, truncate at the base, aseptate or septate, hyaline (Ariyawansa et al. 2015; Tibpromma et al. 2017).
Type species: Pseudoasteromassaria fagi M. Matsum. & Kaz. Tanaka
Notes: The type species Pseudoasteromassaria fagi was found on twigs with both sexual and asexual morphs, and it produces cylindrical, hyaline, septate conidia in culture (Ariyawansa et al. 2015). The second species P. spadicea W. Dong et al. was described from submerged wood in freshwater habitats. Pseudoasteromassaria spadicea differs from the asexual morph of P. fagi by its subglobose, aseptate conidia (Tibpromma et al. 2017). We report another species P. aquatica from Thailand.
List of freshwater Pseudoasteromassaria species
*Pseudoasteromassaria aquatica W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557909; Facesoffungi number: FoF09252; Fig. 48
Etymology: in reference to aquatic habitat of the fungus
Holotype: MFLU 18-1519
Saprobic on decaying wood submerged in freshwater. Sexual morph: Undetermined. Asexual morph: Pycnidia 140–170 μm high, 210–250 μm diam., dark brown, scattered, immersed, conical, coriaceous, ostiolate. Peridium 15–20 μm thick, comprising 4–5 layers of brown to dark brown, irregular cells arranged in a textura angularis. Conidiophores reduced. Conidiogenous cells 5–8 × 2–4 μm (\( {\bar{\text{x}}} \) = 6.5 × 3 μm, n = 5), phialidic, determinate, discrete, cylindrical, hyaline, thin-walled. Conidia 12–18 × 8–13 μm (\( {\bar{\text{x}}} \) = 15.5 × 10.5 μm, n = 20), ellipsoidal, obovoid or irregular, aseptate, guttulate, hyaline, smooth, thin-walled, straight, lacking mucilaginous sheath.
Culture characteristics: On PDA, colony circular, reaching 15 mm in 50 days at 25 °C, white to grey from above, brown from below, surface rough, dry, raised, edge entire or undulate.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat829-1 (MFLU 18-1519, holotype), ex-type living culture MFLUCC 18-1397; ibid., hat829-2 (HKAS 105044, isotype), living culture KUMCC 19-0063.
Notes: Pseudoasteromassaria aquatica is morphologically similar to P. spadicea W. Dong et al. in having immersed pycnidia, phialidic conidiogenous cells, and hyaline, aseptate conidia (Tibpromma et al. 2017). However, P. aquatica has smaller pycnidia (140–170 × 210–250 μm vs. 290–320 × 460–480 μm) and slightly larger conidia (12–18 × 8–13 μm vs. 11–15 × 7–10 μm). Moreover, P. aquatica has ellipsoidal to obovoid conidia, while P. spadicea has subglobose conidia. Phylogenetic analysis supports them to be different species (Fig. 2).
*Pseudoasteromassaria spadicea W. Dong, H. Zhang & K.D. Hyde, Fungal Diversity 83: 59 (2017)
Freshwater distribution: Thailand (Tibpromma et al. 2017)
Key to freshwater Pseudoasteromassaria species
-
1.
Pycnidia 140–170 μm high, 210–250 μm diam., conidia ellipsoidal to obovoid, 12–18 × 8–13 μm………P. aquatica
-
1.
Pycnidia 290–320 μm high, 460–480 μm diam., conidia mostly subglobose, 11–15 × 7–10 μm………P. spadicea
Lentitheciaceae Y. Zhang ter, C.L. Schoch, J. Fourn., Crous & K.D. Hyde, Stud. Mycol. 64: 93 (2009)
Key to freshwater sexual genera of Lentitheciaceae
-
1.
Ascomata with ostiolate papilla covered by short dark setae………Keissleriella
-
1.
Ascomata without setae………2
-
2.
Ascospores filiform………Poaceascoma
-
2.
Ascosproes fusiform to cylindrical………3
-
3.
Ascospores surrounded by a large expanding sheath………Tingoldiago
-
3.
Ascospores without expanding sheath………4
-
4.
Ascospores fusiform………Lentithecium
-
4.
Ascospores cylindrical………Setoseptoria
Keissleriella Höhn., Sber. Akad. Wiss. Wien, Math.-naturw. Kl., Abt. 1 128: 582 (1919)
Saprobic on submerged wood in freshwater or dead wood in terrestrial habitats. Sexual morph: Ascomata immersed, solitary to gregarious, erumpent to nearly superficial, uniloculate, globose, dark brown to black, with ostiolate papilla, covered by dark setae or small blackened cells. Peridium thick, composed of pseudoparenchymatous cells and pale cells. Pseudoparaphyses dense, trabeculate, filiform, long, rarely septate, anastomosing and branching. Asci 4- or 8-spored, bitunicate, fissitunicate, cylindro-clavate, with a furcate pedicel and a small ocular chamber. Ascospores medium-sized, uni- to bi-seriate, ellipsoidal to fusiform, or clavate, cylindrical, straight to slightly curved, hyaline to pale brown, or yellow, septate, sometimes with a vertical septum in central cells, constricted at the septa (Zhang et al. 2012b). Asexual morph: Coelomycetes, developed in culture. Pycnidia erumpent becoming superficial, uniloculate, subglobose to hemispherical, glabrous, dark brown to black, with ostiolate papilla. Mycelium immersed. Peridium thin, composed of thin-walled, flattened cells. Conidiophore reduced. Conidiogenous cells holoblastic, determinate, lageniform, cylindrical to doliiform, hyaline, smooth, formed from the inner most layer of pycnidial wall. Conidia medium-sized, cylindrical to bone-shaped, straight to curved, hyaline to brown at aged, septate, smooth, thin-walled, without sheath (Tanaka et al. 2015).
Type species: Keissleriella aesculi (Höhn.) Höhn.
Notes: Keissleriella is an old genus comprising over 40 epithets in Index Fungorum (2020) with ca. 18 species confirmed with molecular data (Phookamsak et al. 2019). Keissleriella is characterized by globose ascomata, with a small black papilla and short black external setae (Zhang et al. 2012b). Keissleriella was shown to belong in Lentitheciaceae based on a few species (e.g. K. cladophila (Niessl) Corbaz and K. linearis E. Müll. ex Dennis) (Schoch et al. 2009; Zhang et al. 2012b), which has been accepted by other studies (Wijayawardene et al. 2017, 2018, 2020; Phookamsak et al. 2019). Keissleriella was regarded as congeneric with Trichometasphaeria because their species (K. cladophila (Niessl) Corbaz and T. gloeospora (Berk. & Curr.) L. Holm) clustered in one clade (Tanaka et al. 2015). However, Wijayawardene et al. (2017, 2020) treated them as distinct genera. Sequence data of their type species are needed to solve their phylogenetic relationships. All Keissleriella species clustered in a weakly supported clade, which probably indicated a polyphyletic nature.
Keissleriella linearis is the only species reported from freshwater habitats (Zhang et al. 2009d). It was isolated from dry culms of Phragmites communis in UK (Dennis 1964) and later collected from an artificial lake in France (Zhang et al. 2009d). Keissleriella linearis was transferred to Lentithecium based on phylogenetic analyses and examination of a fresh specimen (IFRD 2008) (Zhang et al. 2009d). With more sequences added, K. linearis was shown to be a member of Keissleriella, rather than Lentithecium (Tanaka et al. 2015; this study, Fig. 53). This result was consistant with Singtripop et al. (2015), who re-examined the specimen of K. linearis (IFRD 2008) and described the brown to dark brown setae covering ostiole which is the typical character of Keissleriella. In the phylogenetic analysis of Phookamsak et al. (2019), K. linearis grouped in Lentithecium but with low bootstrap support. We follow the results of Singtripop et al. (2015) and Tanaka et al. (2015) until more sequences are added to the family. Keissleriella linearis is characterized by immersed ascomata covered with a clypeus and numerous, dark brown, cylindrical bristles surrounding the ostiole, clavate asci and fusiform, hyaline, 3-septate ascospores with a thick, mucous sheath (Dennis 1964).
List of freshwater Keissleriella species
*Keissleriella linearis E. Müll. ex Dennis, Kew Bull. 19(1): 120 (1964)
Synonymy: Lentithecium lineare (E. Müll. ex Dennis) K.D. Hyde, J. Fourn. & Ying Zhang, Fungal Diversity 38: 236 (2009)
Freshwater distribution: France (Zhang et al. 2009d)
Lentithecium K.D. Hyde, J. Fourn. & Ying Zhang, Fungal Diversity 38: 234 (2009)
Saprobic on submerged woody plant, grass in freshwater or dead leaf sheaths, stems, culms of grass in terrestrial habitats. Sexual morph Ascomata scattered to grouped, immersed to erumpent, uniloculate, globose to subglobose, glabrous, dark brown to black, with ostiolate papilla. Peridium composed of several layers of thin-walled cells. Pseudoparaphyses numerous, cellular, hyaline, septate, branched, persistent. Asci 8-spored, bitunicate, fissitunicate, clavate-cylindrical to oblong-cylindrical, broadly rounded at the apex, tapering to a short pedicel. Ascospores bi- or tri-seriate, fusiform, straight to slightly curved, hyaline to brown, septate, usually asymmetrical, smooth to roughed, with or without gelatinous sheath. Asexual morph Conidiomata pycnidial, solitary or aggregated, unilocular, immersed, erumpent to superficial, subglobose, ellipsoidal, dark brown to black, glabrous or surrounded by brown, septate, thick-walled hyphae, with ostiolate papilla. Pycnidial wall composed of several layers of dark cells of textura angularis, paler towards the inner layer. Conidiophores reduced to conidiogenous cells. Conidiogenous cells holoblastic, determinate, smooth-walled, hyaline, subglobose to pearshaped. Conidia variable in shape, hyaline, aseptate, smooth (Ryckegem 2001; Zhang et al. 2009d; Hyde et al. 2016b).
Type species: Lentithecium fluviatile (Aptroot & Van Ryck.) K.D. Hyde, J. Fourn. & Ying Zhang
Notes: Lentithecium was established to accommodate L. aquaticum Ying Zhang et al. and three new combinations L. arundinaceum (Sowerby) K.D. Hyde et al., L. fluviatile (type species) and L. lineare (E. Müll. ex Dennis) K.D. Hyde et al. (Zhang et al. 2009d). However, L. arundinaceum was later transferred to Setoseptoria based on phylogenetic analyses, although no morphological connection between L. arundinaceum (ascomycetes) and S. phragmitis Quaedvl. et al. (type species, coelomycetes) was shown (Tanaka et al. 2015). Lentithecium was previously characterized by the lenticular ascomata (Zhang et al. 2009d) and later emended to globose after re-examination of the holotype of L. fluviatile (Hyde et al. 2013).
The freshwater species Lentithecium clioninum (Kaz. Tanaka et al.) Kaz. Tanaka & K. Hiray. and L. pseudoclioninum Kaz. Tanaka & K. Hiray. formed a well-supported clade with the type species, L. fluviatile (Fig. 53). Lentithecium cangshanense Z.L. Luo et al., L. carbonneanum J. Fourn. et al., L. unicellulare Abdel-Aziz and a new species L. kunmingense clustered in a separated clade with low bootstrap support (Fig. 53), and close to the genus Halobyssothecium Dayarathne et al. Lentithecium cangshanense, collected from submerged wood, is probably conspecific with the marine species L. voraginesporum Abdel-Wahab et al., because of their nearly identical sequences (one nucleotide difference in LSU and SSU sequence data, respectively). Unfortunately, their ITS sequence data are lacking. Hyde et al. (2016b) distinguished them based on the size of ascomata, asci and ascospores which are considered as tiny differences in this study. More sequenced collections are needed in future.
Lentithecium aquaticum Ying Zhang et al., which was collected from submerged wood in France, clustered in Lentithecium (Zhang et al. 2009d). With more sequenced species added in the family, the placement of L. aquaticum appeared to be unstable and had a weak relationship with Lentithecium clade (Tanaka et al. 2015; Hyde et al. 2016b; Su et al. 2016a). The most recent publications showed it was phylogenetically distant from Lentithecium and clustered with the members of Setoseptoria, but with low bootstrap support (Wanasinghe et al. 2018b; Phookamsak et al. 2019). Our phylogenetic analysis show L. aquaticum forms a basal clade to Darksidea, Halobyssothecium and Lentithecium (Fig. 53). We exclude L. aquaticum from Lentithecium but more phylogenetic evidence is required.
Lentithecium unicellulare Abdel-Aziz, which was collected from submerged wood in the River Nile in Egypt, is the first asexual species in the genus (Hyde et al. 2016b). We report the second asexual species L. kunmingense, which was collected from China.
List of freshwater Lentithecium species
*Lentithecium cangshanense Z.L. Luo, X.J. Su & K.D. Hyde, Phytotaxa 267: 65 (2016)
Freshwater distribution: China (Su et al. 2016a)
*Lentithecium carbonneanum J. Fourn., Raja & Oberlies, Persoonia 40: 295 (2018)
Freshwater distribution: France (Crous et al. 2018b)
*Lentithecium clioninum (Kaz. Tanaka et al.) Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 99 (2015); Fig. 49a–f
Basionym: Massarina clionina Kaz. Tanaka et al., Mycoscience 46(5): 288 (2005)
Freshwater distribution: Japan (Tanaka et al. 2005b)
*Lentithecium kunmingense W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557910; Facesoffungi number: FoF09253; Fig. 50
Etymology: referring to Kunming, where the holotype was collected
Holotype: HKAS 102150
Saprobic on decaying wood submerged in freshwater. Sexual morph: Undetermined. Asexual morph: Pycnidia 210–250 μm high, 320–350 μm diam., scattered or solitary, unilocular, immersed to erumpent, ellipsoidal, dark brown to black, glabrous, with ostiolate papilla. Peridium 60–80 μm thick, composed of several layers of brown to black brown cells of textura angularis, hyaline to pale brown towards the inner layer which bearing conidiogenous cells. Conidiophores reduced to conidiogenous cells. Conidiogenous cells 5–19 × 2–5 μm (\( {\bar{\text{x}}} \) = 11.5 × 3.5 μm, n = 10), phialidic, determinate, smooth-walled, hyaline, subglobose to ellipsoidal. Conidia 8–14 × 5–8 μm (\( {\bar{\text{x}}} \) = 10.5 × 7 μm, n = 55), subglobose, ovate, ellipsoid, clavate, pyriform or irregular, with rounded or truncate base, hyaline, aseptate, several small to one big guttulate, smooth-walled.
Culture characteristics: On PDA, colony filamentous, reaching 45 mm in 25 days at 25 °C, black from above and below, surface dry, with sparse aerial mycelium, mostly immersed in culture, with a filiform edge.
Material examined: CHINA, Yunnan Province, Kunming University of Science and Technology, on submerged wood in a stream, 10 May 2017, C.X. Liu, L54 (HKAS 102150, holotype), ex-type living culture KUMCC 19-0101.
Notes: Lentithecium kunmingense clusters with L. voraginesporum without bootstrap support (Fig. 53). Lentithecium kunmingense is a coelomycetous species, while L. voraginesporum is an ascomycetous species (Hyde et al. 2016b). Lentithecium voraginesporum only has LSU and SSU sequence data in GenBank, and there are thirteen and four nucleotide differences in LSU and SSU sequence data between L. voraginesporum (CBS H-22560) and L. kunmingense (KUMCC 19-0101), respectively, which indicate them to be different species (Jeewon and Hyde 2016).
Only one asexual species Lentithecium unicellulare has been reported in Lentithecium (Hyde et al. 2016b). Lentithecium kunmingense is similar to L. unicellulare in having dark pycnidia, determinate, hyaline conidiogenous cells and variable, hyaline, aseptate conidia. However, L. kunmingense differs from L. unicellulare in having glabrous pycnidia and larger conidia (8–14 × 5–8 μm vs. 6–9 × 4–5 μm) (Hyde et al. 2016b). Phylogenetic analysis supports them to be different species (Fig. 53).
*Lentithecium pseudoclioninum Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 99 (2015); Fig. 49g
Freshwater distribution: Japan (Tanaka et al. 2015)
*Lentithecium unicellulare Abdel-Aziz, Fungal Diversity 80: 53 (2016)
Freshwater distribution: Egypt (Hyde et al. 2016b)
Key to freshwater Lentithecium species
-
1.
Asexual morph………2
-
1.
Sexual morph………3
-
2.
Conidia 6–9 × 4–5 μm………L. unicellulare
-
2.
Conidia 8–14 × 5–8 μm………L. kunmingense
-
3.
Ascospores hyaline………4
-
3.
Ascospores pigmented………5
-
4.
Ascospores surrounded by a wing-like sheath………L. clioninum
-
4.
Ascospores lacking wing-like sheath………L. pseudoclioninum
-
5.
Asci > 100 µm long, ascospores rough-walled………L. carbonneanum
-
5.
Asci < 100 µm long, ascospores smooth-walled………L. cangshanense
Poaceascoma Phookamsak & K.D. Hyde, Cryptogamie, Mycologie 36: 231 (2015)
Saprobic on submerged bamboo, wood in freshwater or intertidal, dead stem in terrestrial habitats. Sexual morph: Ascomata solitary to gregarious, semi-immersed to erumpent, uniloculate, globose to subglobose, with or without setose, black, with a central ostiole, with short to long papilla. Peridium thick walled, of equal thickness, composed of several layers of dark brown to black, pseudoparenchymatous cells. Pseudoparaphyses dense, cellular, hyaline, septate, persistent, anastomosing above the asci, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, fissitunicate, elongate-cylindrical, short pedicellate, apically rounded with an ocular chamber. Ascospores fasciculate, spirally arranged within the ascus, filiform, curved, hyaline, multiseptate, smooth, thin-walled, without sheath or appendage, ascospores often longer than asci (Phookamsak et al. 2015a). Asexual morph: Undetermined.
Type species: Poaceascoma helicoides Phook. & K.D. Hyde
Notes: Poaceascoma was introduced to accommodate ophiosphaerella-like species associated with Poaceae, which form semi-immersed to erumpent, setose ascomata with short to long necks and filiform ascospores spirally arranged in asci (Phookamsak et al. 2015a). Poaceascoma is a well-studied genus with sequence data available for all species in GenBank; they formed a monophyletic clade in the family with high bootstrap support (Phookamsak et al. 2015a; Luo et al. 2016a; Hyde et al. 2017, 2018a). Some genera also form filiform ascospores in Dothideomycetes, such as Acanthophiobolus, Leptospora, Ophiobolus and Ophiosphaerella (Shoemaker 1976; Boonmee et al. 2011; Zhang et al. 2012b; Boonmee et al. 2014). Acanthophiobolus differs from these genera in having rather smaller, superficial, apapillate ascomata (Boonmee et al. 2011, 2014). Leptospora is distinct in having possesses glabrous ascomata which often stain host tissues red or purple (Hyde et al. 2016b). Ophiobolus and Ophiosphaerella nested in Phaeosphaeriaceae (Phookamsak et al. 2014), which was phylogenetically distant from Poaceascoma (Lentitheciaceae).
Poaceascoma aquaticum Z.L. Luo & K.D. Hyde was collected from submerged bamboo in Thailand (Luo et al. 2016a). It was described as globose to subglobose ascomata without setae, cylindrical to cylindric-clavate asci and pale brown to brown ascospores (Luo et al. 2016a). However, the ascospores were obviously hyaline in the illustration of Luo et al. (2016b).
List of freshwater Poaceascoma species
*Poaceascoma aquaticum Z.L. Luo & K.D. Hyde, Phytotaxa 253: 75 (2016)
Freshwater distribution: Thailand (Luo et al. 2016a)
Setoseptoria Quaedvl., Verkley & Crous, Stud. Mycol. 75: 382 (2013)
Saprobic on decaying leaves or wood/branch in terrestrial or submerged wood in fershwater habitats. Sexual morph: Ascomata erumpent to superficial, scattered to gregarious, sometimes scattered beneath the host periderm or on decorticated wood, subglobose to hemispherical with flattened base, glabrous, sometimes with sparse brown hyphae at sides, dark brown to black, with a central ostiole, with or without short papilla. Peridium thin, composed of several layers of thin-walled cells. Pseudoparaphyses numerous, cellular, hyaline, septate, branched, persistent, anastomosing between and above the asci. Asci 8-spored, bitunicate, fissitunicate, clavate to cylindric-clavate, or narrowly ovoid, pedicellate, rounded at the apex, with an indistinct or minute ocular chamber. Ascospores uni- to tri-seriate, cylindrical to narrowly fusiform, mostly hyaline, sometimes hyaline to pale olivaceous, septate, deeply constricted at the primary septum, mostly asymmetrical, smooth, thin-walled, surrounded by a gelatinous sheath (Tanaka et al. 2004; Hyde et al. 2017; Wanasinghe et al. 2018b). Asexual morph: Coelomycetous. Pycnidia immersed, uniloculate, globose, with brown, verruculose to warty setae, brown, ostiolate, somewhat papillate. Peridium composed of several layers of brown, angular cells which inwardly become hyaline. Conidiophores reduced to conidiogenous cells or with one supporting cell. Conidiogenous cells subcylindrical to doliiform, hyaline, smooth, apical region with several inconspicuous percurrent proliferations, or with periclinal thickening; collarette inconspicuous, or prominent, flared. Conidia subcylindrical, straight to somewhat curved, hyaline, smooth, transversely septate, thin-walled, without appendages or sheath (Quaedvlieg et al. 2013).
Type species: Setoseptoria phragmitis Quaedvl., Verkley & Crous
Notes: Setoseptoria was introduced for a coelomycetous species S. phragmitis which forms setose pycnidia and subcylindrical, (1–)3-septate, hyaline conidia that become olivaceous and verruculose in older cultures (Quaedvlieg et al. 2013). Another six ascomycetous species were added to the genus, but the asexual morphs were not produced in culture. These species forms a well-supported clade in our phylogenetic tree (Fig. 53), but lack strong bootstrap support between each other (Hyde et al. 2017; Wanasinghe et al. 2018b). Tanaka et al. (2015) mentioned that the species producing both sexual and asexual morphs were needed to confirm the validity of this generic treatment.
Setoseptoria arundinacea (Sowerby) Kaz. Tanaka & K. Hiray., a common species occurring on Phragmites culms, was also reported from freshwater habitats (Aptroot 1998; Tanaka and Harada 2003c; Luo et al. 2004; Zhang et al. 2009d). Setoseptoria arundinacea may consist of several cryptic species because two strains, KT 552 and KT 600 (Tanaka et al. 2015), did not form a clade with another two strains CBS 619.86 (Schoch et al. 2009) and CBS 123131 (Zhang et al. 2009c), which showed in Tanaka et al. (2015), Hyde et al. (2017), Wanasinghe et al. (2018b) and our study (Fig. 53). The epitype of this species is expected to solve this S. arundinacea complex. The second freshwater species S. magniarundinacea (Kaz. Tanaka & Y. Harada) Kaz. Tanaka & K. Hiray. has larger ascospores than S. arundinacea (Tanaka et al. 2004) (see key below).
List of freshwater Setoseptoria species
*Setoseptoria arundinacea (Sowerby) Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 101 (2015); Fig. 51a–e
Basionym: Sphaeria arundinacea Sowerby, Col. fig. Engl. Fung. Mushr. (London) 3: tab. 336 (1803)
Synonymy: Possible synonyms see Index Fungorum (2020)
Freshwater distribution: China (Luo et al. 2004), Denmark (Zhang et al. 2009d)
*Setoseptoria magniarundinacea (Kaz. Tanaka & Y. Harada) Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 102 (2015); Fig. 51f, g
Basionym: Massarina magniarundinacea Kaz. Tanaka & Y. Harada, Mycotaxon 90(2): 349 (2004)
Freshwater distribution: Japan (Tanaka and Harada 2004)
Key to freshwater Setoseptoria species
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1.
Ascospores 23–40 × 3.5–6 µm………S. arundinacea
-
1.
Ascospores 67–82 × 6.5–9 µm………S. magniarundinacea
Tingoldiago K. Hiray. & Kaz. Tanaka, Mycologia 102(3): 740 (2010)
Saprobic on submerged culms. Sexual morph: Ascomata scattered, immersed to erumpent, uniloculate, depressed globose to conical, with a flattened base, glabrous, black, with a central, rounded ostiole. Peridium composed of hyaline to brown, small cells. Pseudoparaphyses numerous, cellular, hyaline, septate, immersed in gel matrix. Asci 8-spored, bitunicate, fissitunicate, cylindro-clavate, rounded at the apex, with or without a shallow chamber. Ascospores bi- to tri-seriate, clavate, straight, asymmetrical, the upper cell often broader than the lower one, smooth, thin-walled, usually surrounded by a large, expanding gelatinous sheath (Hirayama et al. 2010; Xu et al. 2020). Asexual morph: Undetermined.
Type species: Tingoldiago graminicola K. Hiray. & Kaz. Tanaka
Notes: Tingoldiago resembles Lindgomyces in ascospore characters and aquatic habitats (Hirayama et al. 2010). However, Tingoldiago differs by its depressed globose to mammiform ascomata with a wedge of palisade-like cells at the rim and graminicolous substrate. Tingoldiago was treated as a synonym of Lentithecium due to the lenticular, immersed to erumpent ascomata, cylindro-clavate asci and hyaline, 1-septate ascospores with sheath (Zhang et al. 2012b). Later, its generic placement was supported by molecular studies (Tanaka et al. 2015; Hyde et al. 2016b; Wanasinghe et al. 2018b).
Freshwater species Tingoldiago graminicola (type) has clavate, hyaline, 1-septate ascospores when young, becoming pale brown, 3-septate with age and with a fusiform gelatinous sheath which expands to form a long appendage in water (Hirayama et al. 2010). Other two freshwater species, T. clavata D.F. Bao et al. and T. hydei D.F. Bao et al., have several long or short, equatorial appendages, but lack the expanding sheath (Xu et al. 2020).
List of freshwater Tingoldiago species
*Tingoldiago clavata D.F. Bao, L. Xu & H.Y. Su, MycoKeys 65: 128 (2020)
Freshwater distribution: Thailand (Xu et al. 2020)
*Tingoldiago hydei D.F. Bao, Z.L. Luo & H.Y. Su, MycoKeys 65: 126 (2020)
Freshwater distribution: Thailand (Xu et al. 2020)
*Tingoldiago graminicola K. Hiray. & Kaz. Tanaka, Mycologia 102(3): 740 (2010); Fig. 52
Freshwater distribution: Japan (Hirayama et al. 2010)
Key to freshwater Tingoldiago species
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1.
Ascospores without appendages at the septum………T. graminicola
-
1.
Ascospores with appendages at the septum………2
-
2.
Ascospores 48–51 × 7.5–9 μm………T. clavata
-
2.
Ascospores 37.5–42 × 7.5–9 μm………T. hydei
Lindgomycetaceae K. Hiray., Kaz. Tanaka & Shearer, Mycologia 102(3): 733 (2010)
Key to freshwater sexual genera of Lindgomycetaceae
-
1.
Ascomata with a clypeus………Neolindgomyces
-
1.
Ascomata without clypeus………2
-
2.
Ascospores < 3-septate………3
-
2.
Ascospores > 13-septate………4
-
3.
Ascospores hyaline to pale brown, 1(–2)-septate, or only brown and > 3-septate in old ascospores………Lindgomyces
-
3.
Ascospores hyaline, 1-septate………Hongkongmyces
-
4.
Ascospores hyaline to golden-pale brown………Arundellina
-
4.
Ascospores brown to dark brown………5
-
5.
Ascospores fusiform to clavate, transversely septate, occasionally with one longitudinal or oblique septa, asci 4- to 8-spored………Lolia
-
5.
Ascospores fusiform or vermiform, transversely septate, without longitudinal or oblique septa, asci 8-spored………Aquimassariosphaeria
Arundellina Wanas., E.B.G. Jones & K.D. Hyde, Fungal Diversity 80: 59 (2016)
Saprobic on dead submerged stem. Sexual morph: Ascomata solitary to scattered, immersed, uniloculate, globose, glabrous, dark brown to black, coriaceous, with ostiolate papilla. Peridium 4–5 layered, outer layer heavily pigmented, comprising reddish to dark brown, thick-walled cells of textura angularis, inner layer comprising hyaline, thin-walled cells of textura angularis. Pseudoparaphyses numerous, cellular, septate, branched. Asci 8-spored, bitunicate, fissitunicate, cylindrical to cylindric-clavate, pedicellate, with an ocular chamber. Ascospores overlapping uni- to bi-seriate, fusiform, hyaline to golden-pale brown, transversely septate, with pointed ends (Hyde et al. 2016b). Asexual morph: Undetermined.
Type species: Arundellina typhae Wanas., E.B.G. Jones & K.D. Hyde
Notes: Arundellina is a monotypic genus introduced for A. typhae, which was isolated from submerged stems of Typha sp. (Typhaceae) in Arun River in UK (Hyde et al. 2016b). The combined LSU and SSU sequence data placed it in Lindgomycetaceae (Hyde et al. 2016b), which is confirmed in this study (Fig. 2). The globose ascomata, cylindric-clavate asci with thick-walled apex, fusiform, 3–4 transversely septate, golden-pale brown ascospores with pointed ends of A. typhae are unique in Lindgomycetaceae (Fig. 53).
List of freshwater Arundellina species
*Arundellina typhae Wanas., E.B.G. Jones & K.D. Hyde, Fungal Diversity 80: 61 (2016); Fig. 54
Freshwater distribution: UK (Hyde et al. 2016b)
Hongkongmyces C.C.C. Tsang et al., Medical Mycol. 52(7): 740 (2014)
Parasitic on biopsy tissues of an infected foot of a patient or saprobic on submerged wood. Sexual morph: Ascomata immersed to semi-immersed, scattered or gregarious, subglobose, coriaceous, dark brown to black, with papilla. Peridium composed of several layers of dark brown cells of textura epidermoidea or textura angularis. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, septate, branched. Asci 8-spored, bitunicate, fisitunicate, cylindric-clavate, pedicellate. Ascospores overlapping biseriate, broad-fusiform, sometimes tapering towards the ends, hyaline, septate, surrounded with mucilaginous sheath (Hyde et al. 2017). Asexual morph: Coelomycetous. Conidiomata pycnidial, globose to ampulliform or ellipsoidal, dark brown to black, with a central ostiole to multiple ostioles. Peridium two-layered, or sometimes poorly developed and thinner at the base. Conidiophores reduced. Conidiogenous cells phialidic, sometimes with sympodial proliferations, discrete, subulate to ampulliform or subcylindrical, hyaline, smooth. Conidia white in mass, hyaline, solitary, ellipsoid to obovoid, globose, subglobose, lacking mucilaginous sheath (Crous et al. 2018b).
Type species: Hongkongmyces pedis C.C.C. Tsang et al.
Notes: Hongkongmyces pedis was isolated from biopsy tissues of an infected foot of a patient and it did not produce fruiting bodies or conidia in culture (Tsang et al. 2014). Later, an asexual morph H. snookiorum Raudabaugh et al. was isolated from submerged wood (Crous et al. 2018b). In our phylogenetic analysis (Fig. 2), the sexual species H. thailandicus Phukhams. & K.D. Hyde and the new species H. aquaticus forms a weakly-supported clade, separated from the type species, H. pedis. In previous studies, H. thailandicus also had a weak relationship with H. pedis (Hyde et al. 2017; Crous et al. 2018b). This group needs further study with more collections.
List of freshwater Hongkongmyces species
*Hongkongmyces aquaticus W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557911; Facesoffungi number: FoF09254; Fig. 55
Etymology: in reference to aquatic habitat of this fungus
Holotype: MFLU 18-1516
Saprobic on decaying wood submerged in freshwater. Sexual morph: Undetermined. Asexual morph: Pycnidia 270–320 μm high, 300–350 μm diam., dark brown to black, scattered, semi-immersed or erumpent to host surface, globose or ellipsoidal, coriaceous, ostiolate. Peridium 50–70 μm thick at the sides, poorly developed and thinner at the base, 30–40 μm thick, composed of dark brown, large, compressed cells of textura angularis. Conidiophores reduced. Conidiogenous cells 9–12 × 3–7 μm (\( {\bar{\text{x}}} \) = 10.5 × 5 μm, n = 5), phialidic, determinate, cylindrical to subcylindrical, hyaline, thin-walled. Conidia 14–19 × 11–15 μm (\( {\bar{\text{x}}} \) = 16.5 × 12.5 μm, n = 20), globose, subglobose or obovoid, aseptate, guttulate, hyaline, smooth, thin-walled, straight, lacking mucilaginous sheath.
Culture characteristics: On PDA, colony circular, reaching 15 mm in 10 days at 25 °C, grey to brown from above, dark brown from below, surface rough, dry, raised, edge entire.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, 20180525-1 (MFLU 18-1516, holotype), ex-type living culture MFLUCC 18-1150; ibid., 20180525-2 (HKAS 105003, isotype), ex-type living culture KUMCC 19-0019.
Notes: Hongkongmyces aquaticus resembles H. snookiorum in having phialidic conidiogenous cells and hyaline, variable shaped conidia, but it lacks sympodial proliferations (Crous et al. 2018b). Additionally, H. aquaticus has larger conidia (14–19 × 11–15 μm vs. 4.5–5.5 × 3.5–4 μm). Both species were collected from freshwater habitats, but from different substrates (submerged wood vs. submerged detritus). Phylogenetic analysis supports them to be different species (Fig. 2).
*Hongkongmyces snookiorum Raudabaugh, Iturr. & A.N. Mill., Persoonia 40: 289 (2018)
Freshwater distribution: USA (Crous et al. 2018b)
Key to freshwater Hongkongmyces species
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1.
Conidia 4.5–5.5 × 3.5–4 μm………H. snookiorum
-
1.
Conidia 14–19 × 11–15 μm………H. aquaticus
Aquimassariosphaeria W. Dong & Doilom, gen. nov.
Index Fungorum number: IF557825; Facesoffungi number: FoF08733
Etymology: referring to type species was collected from aquatic habitat and its morphological similarity to Massariosphaeria
Saprobic on submerged wood or dry branches. Sexual morph: Ascomata scattered or solitary, immersed, erumpent to superficial, subglobose to ellipsoidal, black, coriaceous, with ostiolate papilla, sometimes stain substrate purple. Peridium two-layered, outer layer comprising several layers of dark brown to black, thin-walled, compressed cells, inner layer comprising several layers of pale brown to hyaline, thin-walled, large cells of textura angularis. Pseudoparaphyses numerous, cellular, hyaline, septate, embedded in a matrix. Asci 8-spored, bitunicate, narrowly clavate, short pedicellate, apically rounded. Ascospores bi- to tri-seriate, narrowly fusiform or vermiform, straight or curved, brown, transversely septate, thin-walled, with or without a sheath. Asexual morph: Undetermined.
Type species: Aquimassariosphaeria kunmingensis W. Dong, Doilom & K.D. Hyde
Notes: Aquimassariosphaeria is characterized by its immersed, erumpent to superficial ascomata, sometimes staining substrate purple, and narrowly fusiform or vermiform, brown, transversely septate ascospores. Morphologically, Aquimassariosphaeria is similar to Lolia in having fusiform to clavate, multiple transversely septate, brown ascospores, but the conidia of the latter equipped with apical, sub-apical and basal appendages, which are never formed in Aquimassariosphaeria. Phylogenetic analyses also support them to be different genera (Figs. 2, 61). Additionally, the type species of Massariosphaeria, M. phaeospora (E. Müll.) Crivelli, clusters in Cyclothyriellaceae (Jaklitsch and Voglmayr 2016), while M. typhicola (CBS 609.86) clusters in Lindgomycetaceae (Fig. 2). Although Ariyawansa et al. (2015) transferred Neomassariosphaeria Y. Zhang ter et al. from Amniculicolaceae to Lindgomycetaceae, to accommodate Massariosphaeria typhicola, we do not accept in this study (see notes under Neomassariosphaeria, Amniculicolaceae). A new genus Aquimassariosphaeria is, therefore, established to accommodate Massariosphaeria typhicola and the new species A. kunmingensis.
List of freshwater Aquimassariosphaeria species
*Aquimassariosphaeria kunmingensis W. Dong, Doilom & K.D. Hyde, sp. nov.
Index Fungorum number: IF557912; Facesoffungi number: FoF08734; Fig. 56
Etymology: referring to Kunming, where the holotype was collected
Holotype: HKAS 102148
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 300–350 × 370–400 μm, scattered or solitary, erumpent, mostly superficial, subglobose to ellipsoidal, black, coriaceous, with ostiolate papilla. Peridium 30–40 μm thick, two-layered, outer layer comprising 4–6 layers of dark brown or black, thin-walled, compressed cells of textura angularis or irregular cells, inner layer comprising 3–5 layers of pale brown to hyaline, thin-walled, large cells of textura angularis. Pseudoparaphyses 2 μm diam., numerous, cellular, hyaline, unbranched, septate, embedded in a matrix. Asci 160–200 × 15–18 μm (\( {\bar{\text{x}}} \) = 180 × 17 μm, n = 5), 8-spored, bitunicate, narrowly clavate, short pedicellate, apically rounded. Ascospores 35–46(–55) × 6.5–9.5 μm (\( {\bar{\text{x}}} \) = 40 × 7.8 μm, n = 25), bi- to tri-seriate in the upper part, uni-seriate in the lower part, narrowly fusiform or vermiform, occasionally narrowly clavate with elongate basal cells, with rounded ends, brown, 6–7-septate, occasionally 5- or 8-septate, constricted at the septa, asymmetric, obviously enlarged at the third or fourth cell from the apex, straight or curved, smooth, thin-walled, without a sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 10 mm in 15 days at 25 °C, black from above, dark brown from below, surface rough, with sparse mycelium, mostly immersed in culture, dry, raised, edge entire.
Material examined: CHINA, Yunnan Province, Kunming University of Science & Technology, on submerged wood in a stream, 10 May 2017, C.X. Liu, L47 (HKAS 102148), living culture KUMCC 18-1019.
Notes: Aquimassariosphaeria kunmingensis clusters with A. typhicola with moderate bootstrap support (Figs. 2, 61). Aquimassariosphaeria kunmingensis has superficial ascomata and thin-walled, smooth ascospores without a sheath, while the latter has completely immersed ascomata that staining substrate purple and thick-walled, heavily grained sculpted ascospores with a well-defined, mucilaginous sheath (Leuchtmann 1984). Comparison of single genes between A. kunmingensis (KUMCC 18-1019) and A. typhicola (CBS 609.86) shows that there are 4, 1 and 16 nucleotide differences in LSU, SSU and RPB2 sequence data, respectively, which supports them to be different species.
*Aquimassariosphaeria typhicola (P. Karst.) W. Dong & Doilom, comb. nov.
Index Fungorum number: IF557913; Facesoffungi number: FoF09255
Basionym: Leptosphaeria typhicola P. Karst., Bidr. Känn. Finl. Nat. Folk 23: 100 (1873)
Synonymy: Massariosphaeria typhicola (P. Karst.) Leuchtm., Sydowia 37: 168 (1984)
Other synonyms see Index Fungorum (2020), but Neomassariosphaeria typhicola (P. Karst.) Y. Zhang ter, J. Fourn. & K.D. Hyde is not accepted as a synonymy in this study
Possible freshwater distribution: USA (Fallah and Shearer 2001)
Notes: Massariosphaeria typhicola was transferred from Leptosphaeria based on some collections ZT 9428, ZT 9430, ZT 9431 and ZT 9435, and the description and drawing of Berlese (1894), which were designed from the original material by Karsten. The holotype of Leptosphaeria typhicola was not indicated when published and few information of L. typhicola can be obtained in Karsten (1873) and Berlese (1894). Leuchtmann (1984) mentioned that M. typhicola showed variability in the shape, size and septation of ascospores. Some authors named several strains CBS 123126, CBS 609.86, KT 667 and KT 797 as M. typhicola (Leuchtmann 1984; Tanaka and Harada 2004; Zhang et al. 2009c). However, phylogenetic analyses placed CBS 123126 in Amniculicolaceae (Zhang et al. 2009c, 2012b) and KT 667, KT 797, CBS 609.86 in Lindgomycetaceae (Hyde et al. 2016b; this study, Fig. 2). It is, therefore, considerably important to identify M. typhicola and its relatives with DNA sequence data. To solve the taxonomic confusion of M. typhicola, we select strain CBS 609.86 (specimen ZT 9428) designated by Leuchtmann (1984) as its representative materials. The ascospores from a drawing of M. typhicola based on four specimens ZT 9428, ZT 9430, ZT 9431 and ZT 9435, share similar morphology to the new species Aquimassariosphaeria kunmingensis (Leuchtmann 1984). We, therefore, place two species in the same genus Aquimassariosphaeria. The examination and description for the specimen ZT 9428 is expected.
Our phylogenetic analyses show that KT 667 and KT 797 represent a different species with CBS 609.86 (Figs. 2, 61). Since the very less morphological information of KT 667 and KT 797 in Tanaka and Harada (2004), the real identity of these two strains are uncertain, only if their specimens are re-examined in the future. KT 667 and KT 797 probably represent another new genus, but the establishment needs evidence from their specimens or new collections with sufficient DNA sequence data. We name KT 667 and KT 797 as Massariosphaeria sp. in this study. The strain CBS 123126 has been treated as a different species Neomassariosphaeria typhicola based on morphology and phylogeny in this study (see notes under Neomassariosphaeria, Amniculicolaceae).
Aquimassariosphaeria typhicola was reported from freshwater habitats in USA with detailed description and illustration (Fallah and Shearer 2001). This USA specimen has shorter and thinner asci ((93–)113–133 × 11.5–18 μm vs. 100–160 × 15–25 μm) and shorter ascospores (32–36 × 6–8 μm vs. 26–52 × 6–11 μm) than collections of Leuchtmann (1984). Sequence data of the USA specimen are needed to confirm if A. typhicola occurred in freshwater environment in USA.
Key to freshwater Aquimassariosphaeria species
-
1.
Ascospores smooth………A. kunmingensis
-
1.
Ascospores heavily grained sculpted………A. typhicola
Lindgomyces K. Hiray., Kaz. Tanaka & Shearer, Mycologia 102(3): 733 (2010)
Saprobic on submerged woody plant. Sexual morph: Ascomata scattered to clustered, semi-immersed to nearly superficial, ellipsoidal or lenticular, subglobose to globose, uniloculate, glabrous, dark brown to black, with ostiolate papilla. Peridium composed of hyaline to brown, small, thin-walled cells, sometimes poorly developed at the base. Pseudoparaphyses numerous, cellular, hyaline, septate, branched, anastomosing. Asci 8-spored bitunicate, fissitunicate, cylindrical to clavate, sessile to minutely pedicellate, rounded at the apex, with an ocular chamber. Ascospores bi- to tri-seriate, fusiform to cylindrical, straight to slightly curved, hyaline to pale brown, with a median primary septum, smooth or finely verruculose, thin-walled, usually covered with a sheath or bearing bipolar mucilaginous appendages. Senescent ascospores brown, > 3-septate (Hirayama et al. 2010). Asexual morph: Undetermined.
Type species: Lindgomyces ingoldianus (Shearer & K.D. Hyde) K. Hiray., Kaz. Tanaka & Shearer
Notes: All Lindgomyces species have been reported from freshwater habitats (see list below). Lindgomyces was typified by Massarina ingoldiana Shearer & K.D. Hyde, which is a species complex with some strains assigned to Lindgomyces, and others to Tingoldiago (Hirayama et al. 2010). The fusiform to cylindrical ascospores with a sheath or bearing bipolar mucilaginous appendages are main characters of Lindgomyces. Lindgomyces aquaticus sp. nov. is introduced in this study.
List of freshwater Lindgomyces species
*Lindgomyces angustiascus Raja, A.N. Mill. & Shearer, Mycoscience 54(5): 357 (2013)
Freshwater distribution: USA (Raja et al. 2013a)
*Lindgomyces apiculatus K. Hiray. & Kaz. Tanaka, Mycologia 103(6): 1424 (2011); Fig. 57g
Freshwater distribution: Japan (Raja et al. 2011)
*Lindgomyces aquaticus W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557914; Facesoffungi number: FoF09256; Fig. 58
Etymology: referring to aquatic habitat of this fungus
Holotype: MFLU 18-1711
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 160–200 μm high, 220–250 μm wide, black, scattered, semi-immersed to nearly superficial, ellipsoidal or lenticular, coriaceous. Peridium 1.5–2.5 μm, comprising several layers of brown, thin-walled, large cells of textura angularis or subglobose cells, flattened and poorly developed at the base. Pseudoparaphyses 1.5–2.5 μm diam., sparse, cellular, hypha-like, hyaline, septate, persistent, embedded in a gelatinous matrix. Asci 150–250 × 33–43 μm (\( {\bar{\text{x}}} \) = 210 × 39 μm, n = 10), 8-spored, bitunicate, mostly broadly clavate, rarely narrowly clavate, or cylindrical, apically rounded with well-developed ocular chamber. Ascospores (59–)68–71 × 12–16 μm (\( {\bar{\text{x}}} \) = 70 × 14 μm, n = 15), overlapping bi- to tri-seriate, straight or slightly curved, hyaline and 1-septate when young, slightly constricted at the septa, turn to pale brown and 5-septate when germinated, fusiform with rounded or acute ends, with minute and some large guttulate, thin-walled, smooth, lacking a mucilaginous sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 15 mm in 20 days at 25 °C, grey to brown from above, black from below, surface rough, dry, raised, edge entire.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat8115-1 (MFLU 18-1711, holotype), ex-type living culture MFLUCC 18-1416; ibid., hat8115-2 (HKAS 105029, isotype), ex-type living culture KUMCC 19-0044.
Notes: Lindgomyces aquaticus clusters with an unnamed species Lindgomyces sp. KH241 with high bootstrap support (Figs. 2, 61). Lindgomyces aquaticus differs from KH241 by its larger asci (150–250 × 33–43 μm vs. 125–194 × 20.5–29 μm), ascospores ((59–)68–71 × 12–16 μm vs. 47–62 × 8–12 μm) and different habitats (freshwater vs. intertidal) (Hirayama et al. 2010). A large, sticky sheath is observed in KH241, but not in our collection MFLUCC 18-1416. Comparison of single gene between L. aquaticus (MFLUCC 18-1416) and Lindgomyces sp. (KH241) shows that there are one, zero and seven nucleotide differences in LSU, SSU and ITS sequence data, respectively. Morphological characters mentioned above can easily separate them to be different species. Lindgomyces aquaticus also differs from L. ingoldianus (type) in having wider asci (150–250 × 33–43 μm vs. (110–)120–167.5(–182.5) × 25–32.5 μm), larger ascospores ((59–)68–71 × 12–16 vs. (47–)50–59 × 9–11(–12)) and without sheath (Hirayama et al. 2010). We therefore introduce L. aquaticus sp. nov. and retain KH241 as Lindgomyces sp.
*Lindgomyces breviappendiculatus (Kaz. Tanaka, Sat. Hatak. & Y. Harada) K. Hiray. & Kaz. Tanaka, Mycologia 102(3): 738 (2010); Fig. 57h
Basionym: Lophiostoma breviappendiculatum Kaz. Tanaka, Sat. Hatak. & Y. Harada, Mycoscience 46(5): 288 (2005)
Freshwater distribution: Japan (Tanaka et al. 2005b; Hirayama et al. 2010)
*Lindgomyces carolinensis Raja, J. Fourn., Paguigan & Oberlies, Mycol. Progr. 16(5): 542 (2017)
Freshwater distribution: North Carolina (Raja et al. 2017)
*Lindgomyces cigarosporus Raja, J. Fourn., Paguigan & Oberlies [as ‘cigarospora’], Mycol. Progr. 16(5): 543 (2017)
Freshwater distribution: North Carolina (Raja et al. 2017)
*Lindgomyces cinctosporus Raja, A.N. Mill. & Shearer [as ‘cinctosporae’], Mycologia 86102(3): 738 (2010)
Freshwater distribution: USA (Hirayama et al. 2010)
*Lindgomyces griseosporus Y. Zhang ter, J. Fourn. & K.D. Hyde, Mycoscience 56(1): 43–48 (2014)
Freshwater distribution: France and Spain (Zhang et al. 2014c)
*Lindgomyces ingoldianus (Shearer & K.D. Hyde) K. Hiray., Kaz. Tanaka & Shearer, 88Mycologia 102(3): 733 (2010); Fig. 57a–f
Basionym: Massarina ingoldiana Shearer & K.D. Hyde, Mycologia 89(1): 114 (1997)
Freshwater distribution: Australia (Shearer and Hyde 1997), Brunei (Shearer and Hyde 1997), China (Tsui et al. 2000), Japan (Hirayama et al. 2010), Malaysia (Hyde and Aptroot 1998b), Thailand (Sivichai et al. 2002), USA (Shearer and Hyde 1997)
*Lindgomyces lemonweirensis Raja, A.N. Mill. & Shearer, Mycologia 103(6): 1428 (2011)
Freshwater distribution: USA (Raja et al. 2011)
*Lindgomyces madisonensis Raja & Oberlies, Persoonia, Mol. Phyl. Evol. Fungi 35: 307 90(2015)
Freshwater distribution: USA (Crous et al. 2015c)
*Lindgomyces okinawaensis Tak. Takah. & Kaz. Tanaka, Fungal Diversity 78: 35 (2016); Fig. 57i
Freshwater distribution: Japan (Li et al. 2016a)
*Lindgomyces pseudomadisonensis Tak. Takah. & Kaz. Tanaka, Fungal Diversisty 81 (2016); Fig. 57j
Freshwater distribution: Japan (Hyde et al. 2016b)
*Lindgomyces rotundatus K. Hiray. & Kaz. Tanaka, Mycologia 102(3): 733 (2010); Fig. 57k
Freshwater distribution: Japan and USA (Hirayama et al. 2010)
Key to freshwater Lindgomyces species
-
1.
Ascospores hyaline, smooth………2
-
1.
Ascospores grey-brown, smooth to verruculose………L. griseosporus
-
2.
Ascospores surrounded by a large, expanding gelatinous sheath………3
-
2.
Ascospores without expanding sheath………4
-
3.
Ascospores fusiform with acute ends………L. ingoldianus
-
3.
Ascospores cylindrical with rounded ends………L. rotundatus
-
4.
Ascospores with terminal gelatinous appendages………5
-
4.
Ascospores without terminal gelatinous appendages………10
-
5.
Ascospores < 43 µm long………6
-
5.
Ascospores > 43 µm long………7
-
6.
Asci 100–157 × 14–16 μm………L. madisonensis
-
6.
Asci 85–125 × 17–25(–27) mm………L. apiculatus
-
7.
Sheath evanescent………L. carolinensis
-
7.
Sheath not evanescent………8
-
8.
Ascospores up to 70 μm long, with short, rounded, terminal ephemeral appendages………L. cigarosporus
-
8.
Ascospores < 60 μm long………9
-
9.
Ascospores 47–58 × 9–12 µm………L. angustiascus
-
9.
Ascospores (40–)44–60 × (9.5–)11–17.5 µm………L. breviappendiculatus
-
10.
Ascospores < 10 µm wide………L. pseudomadisonensis
-
10.
Ascospores > 10 µm wide………11
-
11.
Ascospores without sheath………12
-
11.
Ascospores with a sheath………13
-
12.
Ascospores (59–)68–71 × 12–16 μm………L. aquaticus
-
12.
Ascospores (38–)40–48(–51) × (10–)12–19 µm………L. okinawaensis
-
13.
Ascospores 40–58 × 10–18 µm, with an amorphous gelatinous sheath………L. cinctosporus
-
13.
Ascospores 30–44 × 10–15 µm, with an oval, ephemeral sheath………L. lemonweirensis
Neolindgomyces Jayasiri, E.B.G. Jones & K.D. Hyde, Mycosphere 10(1): 79 (2019)
Saprobic on Pandanus sp or submerged wood. Sexual morph: Ascomata scattered to gregarious, immersed, depressed globose or conical with flattened base, dark brown to black, coriaceous, with a small clypeus ostiole. Ostiole with a pore-like opening, central, with a reduced crest, with periphyses made up of lightly pigmented, pseudoparenchymatous cells. Peridium composed of dark brown to black, somewhat flattened cells of textura angularis, fusing and indistinguishable from the host tissues, with inner stratum comprising hyaline cell layers of textura angularis. Pseudoparaphyses numerous, trabeculate, filamentous, hyaline, septate, branched. Asci 8-spored, bitunicate, fissitunicate, cylindric-clavate, short pedicellate, apex rounded with a minute ocular chamber or inconspicuous apical thickening. Ascospores uni- to bi-seriate, overlapping, hyaline, cylindrical or fusiform with narrow, acute ends, septate, smooth-walled, with a mucilaginous sheath (Hyde and Goh 1999b; Jayasiri et al. 2019). Asexual morph: Undetermined.
Type species: Neolindgomyces pandani Jayasiri, E.B.G. Jones & K.D. Hyde
Notes: Neolindgomyces was introduced for N. pandani and a known species Quintaria submersa K.D. Hyde & Goh collected from freshwater habitats (Hyde and Goh 1999b; Jayasiri et al. 2019). Neolindgomyces is distinctive in Lindgomycetaceae by its carbonaceous peridium and presence of clypeus (Jayasiri et al. 2019). It formed a basal clade in the family with high bootstrap support (Jayasiri et al. 2019), but showed low support in Fig. 2 and moderate support in Fig. 61.
List of freshwater Neolindgomyces species
*Neolindgomyces submersus (K.D. Hyde & Goh) Jayasiri & K.D. Hyde [as ‘submersa’] Mycosphere 10(1): 81 (2019)
Basionym: Quintaria submersa K.D. Hyde & Goh, Nova Hedwigia 68(1-2): 262 (1999)
Freshwater distribution: Australia (Hyde and Goh 1999b)
Key to freshwater asexual genera of Lindgomycetaceae
-
1.
Conidia with apical, subapical and basal appendages………Lolia
-
1.
Conidia without appendages………2
-
2.
Conidiogenous cells holoblastic………Clohesyomyces
-
2.
Conidiogenous cells enteroblastic………Hongkongmyces
Clohesyomyces K.D. Hyde, Aust. Syst. Bot. 6(2): 170 (1993)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Conidiomata pycnidial, scattered, subglobose to ellipsoidal, compressed lenticular, dark brown to black, semi-immersed to erumpent, unilocular, ostiolate. Pycnidial wall two-layered. Ostiole dark-brown, circular. Conidiophores reduced. Conidiogenous cells holoblastic, determinate, discrete, hyaline, smooth. Conidia variable in shape, usually ellipsoidal, mostly 1 median-septate, guttulate, hyaline, smooth, thin-walled, straight or slightly curved, surrounded by a mucilaginous sheath (Hyde 1993b).
Type species: Clohesyomyces aquaticus K.D. Hyde
Notes: Clohesyomyces was introduced to accommodate a single species C. aquaticus collected from a freshwater habitat in Australia (Hyde 1993b). Other collections were reported from freshwater habitats in China (Cai et al. 2006b; this study) and Thailand (Zhang et al. 2012a; this study). The phylogenetic position of Clohesyomyces was confirmed in Lindgomycetaceae (Zhang et al. 2012a; Raja et al. 2017) and this study (Fig. 2). The freshwater materials of C. aquaticus collected by Zhang et al. (2012a) was re-examined and described by Li et al. (2020) and this study (Fig. 59). We also report two additional freshwater collections obtained from China and Thailand (Fig. 59).
List of freshwater Clohesyomyces species
*Clohesyomyces aquaticus K.D. Hyde, Aust. Syst. Bot. 6(2): 170 (1993)
Facesoffungi number: FoF07165; Fig. 59
Freshwater distribution: Australia (Hyde 1993b), China (Cai et al. 2006b; this study), Thailand (Zhang et al. 2012a; this study)
Saprobic on submerged wood in freshwater habitats. Sexual morph: Undetermined. Asexual morph: Conidiomata pycnidial, scattered, 160–300 μm high, 180–850 μm diam., subglobose to ellipsoidal, compressed lenticular, dark brown to black, semi-immersed to erumpent, unilocular, ostiolate. Ostiole dark brown, central, circular. Peridium 25–60 μm thick, composed of two layers, with outer wall comprising several layers of dark brown cells, inner wall comprising 3–5 layers of brown-walled rectangle cells of textura porrecta. Conidiophores reduced. Conidiogenous cells holoblastic, up to 20 μm long, determinate, discrete, cylindrical to subcylindrical, hyaline, smooth, forming from the inner layer cells of the pycnidial wall. Conidia 16–29 × 7–16 μm (\( {\bar{\text{x}}} \) = 21.1 × 8.7 μm, n = 10), cylindrical to subcylindrical or ellipsoid, irregular, mostly 1-septate, slightly constricted at the septum, one prominent guttulate in each cell, some with additional small guttules, hyaline, smooth, thin-walled, truncate at the base, obtuse at the apex, straight or slightly curved, surrounded by an irregular, thin mucilaginous sheath.
Culture characteristics: On PDA, colony circular, slow growing, 40 mm in 30 days at 25 °C, brown to grey from above, brown to yellow from reverse, raised, felty wooly, fairly dense, initially aerial with an smooth edge, becoming rough after 20 days, staining agar yellow.
Material examined: THAILAND, Prachuap Khiri Khan Province, on submerged wood in a small river, 30 July 2015, K.D. Hyde, 13A (MFLU 15-2699), living culture MFLUCC 15-0979; CHINA, Yunnan Province, on submerged wood in a small river, 25 November 2017, G.N. Wang, H58A-1 (MFLU 18-1159), living culture MFLUCC 18-1037; ibid., H58A-2 (HKAS 101735), living culture KUMCC 18-0087.
Additional material examined: THAILAND, Chiang Mai Province, Doi Inthanon, on submerged wood, 16 November 2010, H. Zhang, d66 (MFLU 11-1112).
Notes: Our new collections MFLUCC 15-0979 and MFLUCC 18-1037 are identified as Clohesyomyces aquaticus based on identical LSU and ITS sequence data with MFLUCC 11-0092, and phylogenetic analysis (Figs. 2, 61). The conidial size of C. aquaticus varies in different collections, ranging from 15–31 × 7–16 μm. Moreover, MFLUCC 18-1037 has larger diameter of conidiomata than the holotype BRIP 20092 (260–300 μm high, 800–850 μm diam. vs. 247–390 μm high, 156–260 μm diam.) (Hyde 1993b; Zhang et al. 2012a).
Hongkongmyces C.C.C. Tsang et al., Medical Mycol. 52(7): 740 (2014)
(see entry below freshwater sexual genera of Lindgomycetaceae)
Lolia Abdel-Aziz & Abdel-Wahab, Mycotaxon 114: 36 (2011)
Saprobic on submerged decayed stem. Sexual morph: Ascomata solitary or aggregated in stroma, immersed to erumpent, uniloculate, globose to subglobose, sometimes with flattened base, glabrous, dark brown to black, coriaceous to sub-carbonaceous, with cylindrical ostiolar canals, with ostiolate papilla, usually stain the substrate purple. Peridium two-layered, comprising hyaline to yellow-brown, to dark brown, thin-walled cells of textura angularis. Pseudoparaphyses numerous, cellular, thin, hypha-like, septate, branched, persistent, emerged into the ostiolar canal. Asci 4- to 8-spored, bitunicate, fissitunicate, cylindric-clavate, pedicellate, with ocular chamber. Ascospores uni- to bi-seriate, fusiform to clavate, with rounded ends, straight or slightly curved, yellow- to reddish- to dark-brown, transversely septate, occasionally with one longitudinal or oblique septum, smooth- or rough-walled, surrounded by prominent gelatinous sheath (Abdel-Aziz 2016a). Asexual morph: Coelomycetous. Conidiomata solitary or aggregated, superficial, acervular, pearl white to dull yellow. Peridium composed of hyaline cells of textura intricata, embedded in gel. Conidiophores lining the acervuli wall, branched and septate, hyaline, smooth, embedded in gel. Conidiogenous cells holoblastic, terminal, cylindrical to sub-cylindrical, hyaline, smooth, bearing a single conidium. Conidia solitary, ellipsoidal, straight, hyaline, aseptate, smooth, thin-walled, with apical, sub-apical and basal appendages (Abdel-Aziz and Abdel-Wahab 2010).
Type species: Lolia aquatica Abdel-Aziz & Abdel-Wahab
Notes: Lolia was introduced by Abdel-Aziz and Abdel-Wahab (2010) to accommodate the asexual species L. aquatica collected on decayed stem of Phragmites australis from Egypt. Lolia is characterized by acervular conidiomata, clavate, ellipsoidal, cylindrical conidia with apical, sub-apical and basal appendages (Abdel-Aziz and Abdel-Wahab 2010). Its sexual morph was later collected on submerged decayed stem of Phragmites australis from River Nile (Abdel-Aziz 2016a). The authors assigned two holotypes, IMI 398675 and CBS H-22130, based on both asexual and sexual morphs, respectively, which does not conform to “One fungus, one name” (Abdel-Aziz and Abdel-Wahab 2010; Abdel-Aziz 2016a). We select the first holotype (IMI 398675, ex-type living culture MF644) as the exclusive holotype.
The second species L. dictyospora Abdel-Aziz was also collected from River Nile, but on submerged decayed rachis of Phoenix dactylifera (Abdel-Aziz 2016a). The special characters of L. dictyospora, such as 4- to 8-spored asci and clavate ascospores occasionally with one longitudinal or oblique septa, distinguish it from L. aquatica (Abdel-Aziz 2016a). Lolia aquatica has cellular, hypha-like pseudoparaphyses, while L. dictyospora has trabeculate, filiform pseudoparaphyses. Two species cluster together, but without bootstrap support (Abdel-Aziz 2016a; this study, Figs. 2, 61).
List of freshwater Lolia species
*Lolia aquatica Abdel-Aziz & Abdel-Wahab, Mycotaxon 114: 36 (2011); Fig. 60a–j
Freshwater distribution: Egypt (Abdel-Aziz and Abdel-Wahab 2010; Abdel-Aziz 2016a)
*Lolia dictyospora Abdel-Aziz, Phytotaxa 267(4): 283 (2016); Fig. 60k–n
Freshwater distribution: Egypt (Abdel-Aziz 2016a)
Key to freshwater Lolia species
-
1.
Asci 8-spored, ascospores 26–37 × 6–9 μm………L. aquatica
-
1.
Asci 4–8-spored, ascospores 14–19 × 4–7 μm………L. dictyospora
Longipedicellataceae Phukhams., Bhat & K.D. Hyde, Mycosphere 7(11): 1722 (2016)
Key to freshwater genera of Longipedicellataceae
-
1.
Sexual morph………Longipedicellata
-
1.
Asexual morph………2
-
1.
Conidiophores semi-macronematous, slender, conidiogenous cells cuneiform, conidia variable in shape………Submersispora
-
1.
Conidiophores semi-macronematous or reduced, conidiogenous cells reduced or absent, conidia broadly fusiform………Pseudoxylomyces
Longipedicellata H. Zhang, K.D. Hyde & J.K. Liu, Phytotaxa 247(2): 102 (2016)
Saprobic on dead and submerged woody materials. Sexual morph: Ascomata scattered or clustered, immersed, beneath a blackened pseudoclypeus, lenticular, uniloculate, glabrous, brown to black, coriaceous, sometimes ostiolate. Ostiole relatively large, central, short, dark. Peridium thin, comprising several layers of brown, thin-walled, flattened cells of textura angularis, outer layer somewhat carbonaceous, easily cracked. Pseudoparaphyses absent, few or numerous, cellular, hyphae-like, hyaline, sparsely septate. Asci 8-spored, bitunicate, clavate, long pedicellate, with an ocular chamber. Ascospores bi- to tri-seriate, broadly fusiform to ellipsoidal, hyaline, 1-septate, slightly asymmetrical, the upper cell often shorter and broader than the lower one, smooth, thin-walled, surrounded by mucilaginous sheath (Zhang et al. 2016). Asexual morph: Hyphomycetous. Mycelium composed of hyaline to dark brown, septate, branched, smooth hyphae. Conidiophores and conidiogenous cells unknown. Conidia chlamydosporous monilioid, in long acropetal, branched chains, catenate, doliiform, subglubose to oval, brown to reddish-brown, rough-walled (Phukhamsakda et al. 2016) (Fig. 61).
Type species: Longipedicellata aptrootii (K.D. Hyde & S.W. Wong) H. Zhang, K.D. Hyde & J.K. Liu
Notes: Longipedicellata was introduced in Bambusicolaceae to accommodate Didymella aptrootii K.D. Hyde & S.W. Wong based on combined LSU, SSU, RPB2 and TEF sequence data (Zhang et al. 2016). However, it clustered in Bambusicolaceae with low bootstrap support (Zhang et al. 2016). Phukhamsakda et al. (2016) re-collected this species from Thailand and showed a close relationship between Pseudoxylomyces elegans (Goh et al.) Kaz. Tanaka & K. Hiray. and Longipedicellata aptrootii which represented a new family Longipedicellataceae. They also reported the asexual morph of L. aptrootii which formed in the culture. We report L. aquatica sp. nov. in this study.
List of freshwater Longipedicellata species
*Longipedicellata aptrootii (K.D. Hyde & S.W. Wong) H. Zhang, K.D. Hyde & J.K. Liu, Phytotaxa 247(2): 104 (2016); Fig. 62
Basionym: Didymella aptrootii K.D. Hyde & S.W. Wong, Australas. Mycol. 18 (3): 54 (1999)
Freshwater distribution: China (Hyde and Wong 1998), Malaysia (Hyde and Wong 1998), Philippines (Hyde and Wong 1998; Cai et al. 2003a), Thailand (Kurniawati et al. 2010; Zhang et al. 2016; this study)
Saprobic on submerged wood in freshwater. Sexual morph: Ascomata 150–170 μm high, 190–220 μm diam., immersed or semi-immersed, scattered or clustered, lenticular, covered with a blackened pseudoclypeus, black, coriaceous, ostiolate. Peridium 10–15 μm thick, comprising several layers of brown, thin-walled, flattened cells of textura angularis. Pseudoparaphyses 2–2.5 μm wide, numerous, cellular, hyphae-like, hyaline, sparsely septate, unbranched. Asci 80–115 × 19–26 μm (\( {\bar{\text{x}}} \) = 95 × 22 μm, n = 10), 8-spored, bitunicate, fissitunicate, broadly clavate, with a long, straight or twisted pedicel and an ocular chamber. Ascospores 17.5–22 × 8–8.5 μm (\( {\bar{\text{x}}} \) = 19 × 8 µm, n = 15), bi- to tri–seriate, ellipsoidal to broadly fusiform, rounded at both ends, hyaline, 1-septate, constricted at the septum, the upper cell slightly broader and shorter than the lower cell, guttulate, thin-walled, surrounded by a large, irregular, mucilaginous sheath, 10–15 μm wide. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 15 mm in 30 days at 25 °C, black in inner layer and white in outer layer from above, black from below, surface fluffy, with fairly dense mycelium, raised, with a smooth edge.
Material examined: THAILAND, Phayao Province, on submerged wood in a stream, 23 February 2018, X.D. Yu, Y22 (MFLU 18-1000), living culture MFLUCC 18-0988.
Additional material examined: THAILAND, Chiang Rai Province, on submerged bamboo, 18 January 2010, H. Zhang (MFLU 10-0162).
Notes: Our new collection MFLUCC 18-0988 is identified as Longipedicellata aptrootii based on their identical LSU and ITS sequence data between MFLUCC 18-0988 and MFLUCC 10-0297, and phylogenetic analysis (Figs. 2, 68). Our collection has wider asci (80–115 × 19–26 μm vs. 70–100 × 17–20 μm) than the reference specimen in Zhang et al. (2016). We found numerous pseudoparaphyses in our collection, which were not mentioned in Zhang et al. (2016).
*Longipedicellata aquatica W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557915; Facesoffungi number: FoF09257; Fig. 63
Etymology: referring to aquatic habitat of this fungus
Holotype: MFLU 17-1686
Saprobic on submerged wood in freshwater. Sexual morph: Ascomata 150–200 μm high, 200–250 μm diam., lenticular or subglobose, immersed or semi-immersed, covered with a blackened pseudoclypeus, black, with mass of grey-white ascospores pouring out when mature, scattered or clustered, coriaceous, ostiolate. Peridium 5–10 μm thick, comprising several layers of brown to black, thin-walled cells of textura angularis. Pseudoparaphyses sparse, cellular, hyphae-like, hyaline, sparsely septate. Asci 85–120 × 22–27 μm (\( {\bar{\text{x}}} \) = 100 × 24 μm, n = 20), 8-spored, bitunicate, fissitunicate, narrowly to broadly clavate, elongate soon when released in water, up to 180 μm long, with a long, straight or twisted pedicel and an ocular chamber. Ascospores 19–22 × 8.5–10.5 μm (\( {\bar{\text{x}}} \) = 2 × 9.5 µm, n = 20), bi- to tri-seriate, ellipsoidal to broadly fusiform, rounded at both ends, obtuse, hyaline, 1-septate, constricted at the septum, the upper cell slightly broader and shorter than the lower cell, guttulate, with two prominent guttulate in each cell, becoming one big guttulate when mature, thin-walled, surrounded by a large, obvious, ellipsoidal, mucilaginous sheath, 7–27 μm wide, deeply constricted near the ascospores septa. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony filamentous, reaching 20 mm in 15 days at 25 °C, black with brown margin from above, black from below, surface fluffy, with aerial mycelium, raised, with a smooth edge.
Material examined: THAILAND, Chiang Mai Province, Phrao District, on submerged wood in a stream, 1 September 2017, G.N. Wang, g7 (MFLU 17-1686, holotype), ex-type living culture MFLUCC 17-2334; Nakhon Phaanon Province, on submerged decaying wood of unidentified plants, 12 December 2018, H. Yang, T12 (MFLU 19-0530), living culture MFLUCC 19-0324; Mukdahan Province, on submerged decaying wood of unidentified plants, 13 December 2018, H. Yang, T45 (MFLU 19-0551), living culture MFLUCC 19-0340.
Notes: Longipedicellata aquatica clusters with L. aptrootii with high bootstrap support (Figs. 2, 68). The asci of L. aquatica quickly become elongate when released in water, up to 180 μm long, but not in L. aptrootii (Zhang et al. 2016). Additionally, their ascospore sheaths are different (large, obvious, ellipsoidal, mucilaginous sheath, deeply constricted near the ascospore septa in L. aquatica vs. large, irregular, mucilaginous sheath in L. aptrootii). Longipedicellata aquatica is more similar to one collection of L. aptrootii (MFLU 16–0032) in having similar ascal size, but differs in having shorter ascospores (19–22 × 8.5–10.5 μm vs. 19–26 μm × 7–11 μm) (Phukhamsakda et al. 2016). After comparision of their single genes, there are three and 21 nucleotide differences in LSU and ITS sequence data, between L. aquatica MFLUCC 17-2334 and L. aptrootii MFLUCC 10-0297, respectively, which indicates that they are distinct species (Jeewon and Hyde 2016). Longipedicellata aquatica sp. nov. is therefore introduced here.
Key to freshwater Longipedicellata species
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1.
Asci 70–100 × 17–20 μm, ascospores surrounded by irregular sheath………L. aptrootii
-
1.
Asci 85–120 × 22–27 μm, ascospores surrounded by ellipsoidal sheath, which is deeply constricted near the ascospores septa………L. aquatica
Pseudoxylomyces Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 126 (2015)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies on natural substratum, scattered to gregarious, dark brown to black, glistening. Mycelium mostly immersed, pale brown to reddish brown. Stromata lacking. Conidiophores septate, brown, branched or not developed. Conidiogenous cells holoblastic. Conidia single, broadly fusiform or ellipsoidal, straight, with several transverse septa of thick-walled, yellowish brown to dark brown, with paler end cells, without sheath or appendages (Tanaka et al. 2015).
Type species: Pseudoxylomyces elegans (Goh, W.H. Ho, K.D. Hyde & C.K.M. Tsui) Kaz. Tanaka & K. Hiray.
Notes: Pseudoxylomyces was proposed to accommodate Xylomyces elegans Goh et al., which was isolated from submerged wood in Australia (Goh et al. 1997; Tanaka et al. 2015). Xylomyces is characterized as lacking conidiophores and conidiogenous cells, but has large chlamydospores (Goos et al. 1977; Goh et al. 1997). In contrast, Pseudoxylomyces is quite distinctive in producing broadly fusiform conidia at the tip of the conidiophores (Tanaka et al. 2015). One new species P. aquaticus is introduced in Pseudoxylomyces in this study.
List of freshwater Pseudoxylomyces species
*Pseudoxylomyces aquaticus W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557916; Facesoffungi number: FoF09258; Fig. 64
Etymology: referring to aquatic habitat of this fungus
Holotype: HKAS 100937
Saprobic on decaying, submerged wood in freshwater. Sexual morph: Undetermined. Asexual morph: Colonies scattered or gregarious, effuse, black. Mycelium mostly immersed in natural substratum, hyaline to pale brown. Conidiophores reduced or absent. Conidiogenesis holoblastic. Conidia 37–52 × 13–17 µm (\( {\bar{\text{x}}} \) = 43 × 15 µm, n = 20), solitary, dry, broadly fusiform, with 5 thick septa, distinctly constricted at the septa, brown, sometimes the two central cells swollen, guttulate when young, sometimes pale brown at bipolar cells which are easily wizened when old, rough-walled, verruculose, straight, thick-walled.
Culture characteristics: On PDA, colony circular, reaching 20 mm in 20 days at 25 °C, pale brown to white from above and below, surface rough, with sparse mycelium, dry, edge entire.
Material examined: THAILAND, Chiang Mai Province, Phrao District, on submerged wood in a stream, 1 September 2017, G.N. Wang, 4.14 (HKAS 100937, holotype), ex-type living culture KUMCC 17-0312.
Notes: Pseudoxylomyces aquaticus shares similar characters with the type species P. elegans in having broadly fusiform conidia with thick septa (Goh et al. 1997; Tanaka et al. 2015). However, P. aquaticus has smaller conidia (37–52 × 13–17 μm vs. 66–104 × (19–)26–40 μm), fewer and stable number of septa (5-septate vs. 4–7-septate) and different pigmentation (brown vs. yellowish brown to orange brown) (Goh et al. 1997; Tanaka et al. 2015). Phylogenetic analysis supports them to be different species (Figs. 2, 68).
*Pseudoxylomyces elegans (Goh et al.) Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 126 (2015)
Facesoffungi number: FoF09259; Figs. 65, 66
Basionym: Xylomyces elegans Goh, W.H. Ho, K.D. Hyde & K.M. Tsui, Mycol. Res. 101(11): 1324 (1997)
Freshwater distribution: Australia (Goh et al. 1997), Brazil (Barbosa and Gusmão 2011), China (Tsui and Hyde 2004), India (Patil and Borse 2015), Japan (Tanaka et al. 2015), Seychelles (Goh et al. 1997), Thailand (Sivichai et al. 2000; this study), USA (Raja et al. 2007)
Saprobic on decaying, submerged wood in freshwater. Sexual morph: Undetermined. Asexual morph: Colonies gregarious or scattered, effuse, black, glistening. Mycelium partly immersed in natural substratum, composed of hyaline to pale brown, septate hyphae. Conidiophores up to 70 µm long, semi-macronematous, mononematous, unbranched, septate, not constricted at the septa, smooth, hyaline to pale brown to brown, thin-walled. Conidiogenous cells 16–20 × 3.5–4.5 µm, holoblastic, monoblastic, integrated, determinate, terminal, cylindrical, hyaline to pale brown, smooth-walled. Conidia (70–)80–90(–100) × 29–37(–40.5) µm (\( {\bar{\text{x}}} \) = 87.5 × 35 µm, n = 15), solitary, dry, mostly broadly ellipsoidal with suddenly tapering ending cells, 5–6(–7) thick septate, distinctly constricted and darker at the septa, two central cells mostly swollen and greatly enlarged, which almost occupy 1/2–3/5 of the whole conidia, reddish brown to dark brown, guttulate when young, straight or slightly curved, minutely rough-surfaced, thick-walled; ending cells long or short, subcylindrical, paler, rounded and easily wizened when old.
Culture characteristics: On PDA, colony circular, reaching 30 mm in 35 days at 25 °C, reddish brown to pale grey from above, reddish brown from below, surface rough, with sparse mycelium, mostly immersed in culture, dry, edge entire.
Material examined: THAILAND, Nan Province, on submerged wood in a stream, 4 August 2017, Saranyaphat Boonmee, DP8-1 (MFLU 17-1712), living culture MFLUCC 17-2350; ibid., DP8-2, living culture MFLUCC 17-2351.
Additional material examined: JAPAN, Okinawa, Isl. Iriomote, Oomijya-river, on submerged twigs of woody plant, 12 July 2011, K. Tanaka & K. Hirayama, KT 2887 = HHUF 30139, culture MAFF 243852.
Notes: Our collection MFLUCC 17-2350 clusters with Pseudoxylomyces elegans (KT 2887) with strong bootstrap support (Figs. 2, 68). They share similar morphology in conidial size, pigmentation and septa (Goh et al. 1997; Tanaka et al. 2015). Comparing individual nucleotides between MFLUCC 17-2350 and KT 2887, we noticed 100% similarities in LSU sequence data, nine and eight nucleotide differences in ITS and TEF sequence data, respectively. Based on their very similar morphology and no resolution in the phylogenetic tree (Figs. 2, 68), MFLUCC 17-2350 is, therefore, identified as P. elegans. The conidia of P. elegans are smooth-walled in HKU (M) 3242 (Goh et al. 1997), we observed the rough-walled conidia in our collection MFLUCC 17-2350. The conidia in our collection mostly have two swollen and greatly enlarged, central cells, which are not much obvious in HKU (M) 3242 and KT 2887. The strain SS1077 clusters basal to P. elegans with high bootstrap support (Fig. 68). SS1077 is named as P. elegans in Prihatini et al. (2008), the real identity of SS1077 is, however, better confirmed until more evidences are obtained. We name SS1077 as Pseudoxylomyces sp. as its morphology is unavailable and only ITS sequence data is deposited in GenBank.
Key to freshwater Pseudoxylomyces species
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1.
Conidia 37–52 × 13–17 µm………P. aquaticus
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1.
Conidia 66–104 × (19–)26–40 μm………P. elegans
Submersispora W. Dong, H. Zhang & K.D. Hyde, gen. nov.
Index Fungorum number: IF557805; Facesoffungi number: FoF08719
Etymology: referring to submerged habitat of this fungus
Saprobic on decaying, submerged wood in freshwater. Sexual morph: Undetermined. Asexual morph: Colonies broadly punctiform, gregarious or scattered or solitary, raised, black. Mycelium mostly immersed in natural substratum, consisting of branched, septate, thin-walled, smooth, hyaline to pale brown hyphae. Conidiophores semi-macronematous, mononematous, cylindrical, slender, unbranched, septate, smooth, pale brown, thin-walled. Conidiogenous cells monoblastic, holoblastic, integrated, determinate, cuneiform, pale brown, smooth. Conidia acrogenous, solitary, dry, variable in shape, septate, brown to dark black, smooth, thin-walled.
Type species: Submersispora variabilis W. Dong, H. Zhang & K.D. Hyde
Notes: Two freshwater genera Longipedicellata and Pseudoxylomyces are accommodated in Longipedicellataceae (Goh et al. 1997; Tanaka et al. 2015; Phukhamsakda et al. 2016; Zhang et al. 2016). Phylogenetic analyses show that our collection MFLUCC 17-2360 nests between Longipedicellata and Pseudoxylomyces with strong bootstrap support (Figs. 2, 68). Both Longipedicellata and Pseudoxylomyces have chlamydospore-like structures or chlamydospores (Goh et al. 1997; Phukhamsakda et al. 2016). Our collection resembles Pseudoxylomyces in having holoblastic conidiogenous cells, but differs in having slender, semi-macronematous conidiophores and variable shaped conidia. Thus, the third freshwater genus Submersispora is introduced in this study.
List of freshwater Submersispora species
*Submersispora variabilis W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557917; Facesoffungi number: FoF08720; Fig. 67
Etymology: referring to variable shape of conidia
Holotype: MFLU 17-1719
Saprobic on decaying, submerged wood in freshwater. Sexual morph: Undetermined. Asexual morph: Colonies broadly punctiform, gregarious or scattered or solitary, raised, black. Mycelium mostly immersed in natural substratum, consisting of branched, septate, thin-walled, smooth, hyaline to pale brown hyphae. Conidiophores up to 230 µm long, 3 µm wide, semi-macronematous, mononematous, cylindrical, slender, unbranched, septate, slightly constricted at the septa, smooth, pale brown, thin-walled. Conidiogenous cells 5.2–6.4 × 5.5–6 µm (\( {\bar{\text{x}}} \) = 5.8 × 5.7 µm, n = 5), monoblastic, holoblastic, integrated, determinate, cuneiform, pale brown, smooth. Conidia 26.5–185.5 × 35–90 µm (\( {\bar{\text{x}}} \) = 96.5 × 65.7 µm, n = 30), acrogenous, solitary, dry, variable in shape, mostly subglobose, ellipsoidal, oblong, irregular, septate, muriform, slightly constricted at the septa, comprising large number of angular cells, hyaline to brown when young, dark black and invisible for septa when mature, smooth, thin-walled.
Culture characteristics: On PDA, colony circular, reaching 30 mm in 15 days at 25 °C, grey in the middle with dark brown margin from above, dark brown from below, surface rough, fluffy, with dense mycelium, dry, raised, edge entire.
Material examined: THAILAND, Chiang Mai Province, MRC, on submerged wood in a stream, 1 September 2017, X.D. Yu, 2A (MFLU 17-1719, holotype), ex-type living culture MFLUCC 17-2360.
Lophiostomataceae Sacc. [as ‘Lophiostomaceae’], Syll. fung. (Abellini) 2: 672 (1883)
Key to freshwater genera of Lophiostomataceae
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1.
Ascospores pigmented………2
-
1.
Ascospores hyaline………4
-
2.
Ascospores evenly coloured, yellowish brown to dark brown………3
-
2.
Ascospores pale yellowish to olivaceous brown, but pale at the terminal cells………Neotrematosphaeria
-
3.
Ascospores fusiform, often with hyaline appendages………Biappendiculispora
-
3.
Ascospores cigar-shaped or ellipsoidal-fusiform, sometimes with terminal appendages………Sigarispora
-
4.
Ascospores with longest sheath drawn out to form polar appendages with tips of the sheath capped………Pseudocapulatispora
-
4.
Ascospores appendages not as above………5
-
5.
Ascospores with a mucilaginous collar around its equator, surrounded by a spreading papilionaceous sheath………Vaginatispora
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5.
Ascospores without a spreading papilionaceous sheath………6
-
6.
Ascospores with globose appendages at both ends………Neovaginatispora
-
6.
Ascospores without globose appendages………7
-
7.
Ascospores with an internal chamber and a narrow sheath drawn out at both ends………Crassiclypeus
-
7.
Ascospores without an internal chamber or a sheath………8
-
8.
Ascomata sometimes with short papilla………Lentistoma
-
8.
Ascomata often with crest-like apex………9
-
9.
Ascospores with a narrow, bipolar sheath and coelomycetous asexual morph………Flabellascoma
-
9.
Ascospores not only as above………Lophiostoma
Biappendiculispora Thambug., Kaz. Tanaka & K.D. Hyde, Fungal Diversity 74: 214 (2015)
Saprobic on dead herbaceous stems or culms of Poaceae or submerged wood. Sexual morph: Ascomata solitary to gregarious, immersed, with papilla erumpent through host surface, reddish brown to black, subglobose, coriaceous, ostiolate. Ostiole variable in shape, central, with a pore-like opening, plugged by gelatinous tissue, made of hyaline, pseudoparenchymatous cells. Peridium composed of a single stratum, with several layers of cells of textura angularis, fusing with the host tissues in outer layer. Pseudoparaphyses numerous, cellular, hypha-like, hyaline, septate, branched. Asci 8-spored, bitunicate, fissitunicate, cylindric-clavate, with short, bulbous pedicel, with an ocular chamber. Ascospores uni- to bi-seriate, fusiform, with acute ends, septate, constricted at the septa, pale yellowish to brown, with hyaline appendages (Thambugala et al. 2015; Bao et al. 2019c). Asexual morph: Undetermined.
Type species: Biappendiculispora japonica Thambug., Wanas., Kaz. Tanaka & K.D. Hyde
Notes: The monotypic genus Biappendiculispora was introduced for B. japonica (Thambugala et al. 2015) which was initially described as Lophiostoma caulium “var. f” (Tanaka and Harada 2003b). Three strains of B. japonica collected in Japan clustered in a separated clade with Lophiostoma (Thambugala et al. 2015; Bao et al. 2019c; this study, Fig. 74). Bao et al. (2019c) found this species from freshwater in China.
List of freshwater Biappendiculispora species
*Biappendiculispora japonica Thambug., Wanas., Kaz. Tanaka & K.D. Hyde, Fungal Diversity 74: 214 (2015)
Freshwater distribution: China (Bao et al. 2019c)
Crassiclypeus A. Hashim., K. Hiray. & Kaz. Tanaka, Stud. Mycol. 90: 167 (2018)
Saprobic on submerged dead twigs of woody plant. Sexual morph: Ascomata scattered to gregarious, immersed, subglobose, dark brown to black, ostiolate. Ostiolar neck crest-like, elongate, laterally compressed, surrounded by a well-developed clypeus. Peridium uniform, composed of elongate, brown cells, surrounded by brown hyphae. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, septate, branching and anastomosing. Asci 8-spored, bitunicate, fissitunicate, clavate, pedicellate, apically rounded with an ocular chamber. Ascospores fusiform, hyaline, septate, smooth, with an internal chamber and a narrow sheath which drawn out at both ends (Hashimoto et al. 2018). Asexual morph: Coelomycetous. Conidiomata pycnidial, superficial to immersed, scattered or clustered in small groups, globose to subglobose. Peridium composed of subglobose to rectangular, brown cells. Conidiophores reduced to conidiogenous cells. Conidiogenous cells phialidic, ampliform, hyaline, smooth. Conidia subglobose with rounded ends, hyaline, aseptate, smooth (Hashimoto et al. 2018).
Type species: Crassiclypeus aquaticus A. Hashim., K. Hiray. & Kaz. Tanaka
Notes: Crassiclypeus was introduced to accommodate the freshwater species C. aquaticus collected in Japan (Hashimoto et al. 2018). The asexual morph has subglobose conidia formed in culture (Hashimoto et al. 2018). Crassiclypeus aquaticus clusters basal to Flabellascoma with moderate bootstrap support (Fig. 74). Crassiclypeus aquaticus shares similar morphological characters with F. fusiforme in having fusiform, hyaline ascospores with a narrow, bipolar sheath. However, an internal chamber was not observed in the ascospores of F. fusiforme (see description of F. fusiforme below).
List of freshwater Crassiclypeus species
*Crassiclypeus aquaticus A. Hashim., K. Hiray. & Kaz. Tanaka, Stud. Mycol. 90: 167 (2018)
Freshwater distribution: Japan (Hashimoto et al. 2018).
Flabellascoma A. Hashim., K. Hiray. & Kaz. Tanaka, Stud. Mycol. 90: 167 (2018)
Saprobic on plant materials and submerged wood. Sexual morph: Ascomata scattered, immersed with neck erumpent through host surface, subglobose to ellipsoidal. Ostiolar neck elongate, laterally compressed. Peridium composed of elongate, brown to dark brown cells. Pseudoparaphyses numerous, cellular, hypha-like, hyaline, septate, branching and anastomosing. Asci 8-spored, bitunicate, fissitunicate, cylindrical-clavate. Ascospores fusiform, hyaline, septate, with a narrow, bipolar sheath (Hashimoto et al. 2018). Asexual morph: Coelomycetous. Conidiomata pycnidial, globose to subglobose. Peridium composed of subglobose to rectangular, brown cells. Conidiophores absent. Conidiogenous cells holoblastic, cylindrical or ampliform, hyaline, smooth. Conidia subglobose with rounded ends, hyaline, smooth, aseptate (Hashimoto et al. 2018) (Fig. 68).
Type species: Flabellascoma minimum A. Hashim., K. Hiray. & Kaz. Tanaka
Notes: Flabellascoma was introduced to accommodate F. cycadicola A. Hashim. et al. and F. minimum. Flabellascoma is morphologically similar to Pseudolophiostoma Thambug. et al. in ascomata with a well-developed, crest-like ostiolar neck (Thambugala et al. 2015; Hashimoto et al. 2018), but phylogeny separates them as distinct genera (Hashimoto et al. 2018; this study, Fig. 74). Two freshwater species F. aquaticum D.F. Bao et al. and F. fusiforme D.F. Bao et al. are morphologically very similar, the former has a long, cylindrical neck, but the latter has a short, crest-like neck (Bao et al. 2019c). They also can be distinguished by the size of asci (see key below).
List of freshwater Flabellascoma species
*Flabellascoma aquaticum D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Mycosphere 10, 1085 (2019)
Freshwater distribution: China (Bao et al. 2019c)
*Flabellascoma fusiforme D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Mycosphere 10, 1089 (2019); Fig. 69
Freshwater distribution: China (Bao et al. 2019c; this study)
Saprobic on submerged wood. Sexual morph: Ascomata 160–180 μm high, 140–150 μm diam., black, scattered, immersed with neck erumpent through host surface, subglobose. Ostiolar neck crest-like, elongate, compressed, 130–150 μm high, 75–85 μm wide, composed of several layers of brown to black, thick-walled cells of textura angularis or globose cells. Peridium 15–25 μm thick, composed of brown to dark brown, thin-walled cells of textura angularis or rectangular cells. Pseudoparaphyses 2 μm wide, numerous, trabeculate, hyaline, sparsely septate, indistinctly branched. Asci 8-spored, bitunicate, clavate, 66–87 × 8–11.5 μm (\( {\bar{\text{x}}} \) = 74.8 × 10 μm, n = 10), apically rounded, with an ocular chamber and a short pedicel. Ascospores 15–22 × 4–6 μm (\( {\bar{\text{x}}} \) = 18 × 5 μm, n = 10), fusiform, biseriate, straight or slightly curved, hyaline, 1-septate, deeply constricted at the septum, slightly constricted at a quarter, the upper cell slightly broader than the lower one, sharply or gradually narrowed towards two ends, two prominent guttulate in each cell, thin-walled, smooth, with a narrow, hyaline, lateral narrowly pad-like sheath, 3.5–7 μm long at both ends. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 5 mm in 15 days at 25 °C, white from above, pale brown from below, surface rough, with dense mycelium, dry, raised, edge entire.
Material examined: CHINA, Yunnan Province, Pingbian, on submerged wood in a stream, 20 September 2017, W. Dong, PB30A (MFLU 18-1167), living culture MFLUCC 18-1019.
Notes: Our collection MFLUCC 18-1019 has identical LSU and ITS sequence data to F. fusiforme, which indicates that they are conspecific. Our collection has smaller ascomata (160–180 × 140–150 μm vs. 310–420 × 320–380 μm) and a thinner peridium (15–25 μm vs. 25–50 μm) than the holotype (Bao et al. 2019c). Phylogenetic analysis also supports that they are the same species (Fig. 74).
Key to freshwater Flabellascoma species
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1.
Asci 66–80 × 10–12 μm………F. fusiforme
-
1.
Asci 48–72 × 8–9 μm………F. aquaticum
Lentistoma A. Hashim., K. Hiray. & Kaz. Tanaka, Stud. Mycol. 90: 169 (2018)
Saprobic on woody plant or submerged wood. Sexual morph: Ascomata scattered, immersed to erumpent, subglobose or conical, with ostiolar, elongate, laterally compressed neck, surrounded by a well-developed clypeus or with ostiolate, short papilla. Peridium composed of globose, brown or black cells. Pseudoparaphyses numerous, cellular, hypha-like, narrow, indistinctly septate, branching and anastomosing. Asci 8-spored, bitunicate, fissitunicate, cylindrical-clavate. Ascospores fusiform, hyaline, septate, with or without a bipolar sheath (Hashimoto et al. 2018). Asexual morph: Undetermined.
Type species: Lentistoma bipolare (K.D. Hyde) A. Hashim., K. Hiray. & Kaz. Tanaka
Notes: Lentistoma was introduced based on Massarina bipolaris K.D. Hyde (Hashimoto et al. 2018), which was collected from woody plant or submerged wood. We introduce the second Lentistoma species which was collected from submerged wood in Thailand.
List of freshwater Lentistoma species
*Lentistoma aquaticum W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557918; Facesoffungi number: FoF09260; Fig. 70
Etymology: referring to aquatic habitat of this fungus
Holotype: MFLU 18-1718
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 270–320 μm high, 580–620 μm wide, black, scattered, immersed to erumpent, conical, carbonaceous, with ostiolate, short papilla. Peridium 50–70 μm at the sides, 20–30 μm at the base, comprising carbonaceous, occluded dark cells, easily cracked, flattened at the base. Pseudoparaphyses 3.5 μm wide, numerous, cellular, hypha-like, hyaline, distantly septate. Asci (90–)130–160 × (12–)15–19(–21) μm (\( {\bar{\text{x}}} \) = 145 × 17 μm, n = 10), 8-spored, bitunicate, narrowly to broadly clavate, short pedicellate, apically rounded with well-developed ocular chamber. Ascospores 38–43 × 6.5–8.5 μm (\( {\bar{\text{x}}} \) = 40 × 7.5 μm, n = 20), biseriate or overlapping triseriate, slightly curved, hyaline, 1-septate, constricted at the septa, fusiform, guttulate, thin-walled, smooth, lacking a mucilaginous sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony irregular, reaching 15 mm in 15 days at 25 °C, white from above, white to pale yellow from below, surface rough, dry, raised, edge entire.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat3106-1 (MFLU 18-1718, holotype), ex-type living culture MFLUCC 18-1275; ibid., hat3106-2 (HKAS 105032, isotype), ex-type living culture KUMCC 19-0047.
Notes: Lentistoma aquaticum clusters with L. bipolare with strong bootstrap support (Fig. 74). Lentistoma bipolare has crest-like, elongate, laterally compressed neck, while L. aquaticum has ostiolate and short papilla. Lentistoma aquaticum has longer and wider asci ((90–)130–160 × (12–)15–19(–21) μm vs. (82–) 105–140 × 8–15 μm) and longer ascospores (38–43 × 6.5–8.5 μm vs. 20–33 × 5.5–9(–11) μm) than L. bipolare (Hashimoto et al. 2018). Additionally, an internal chamber and a narrow sheath drawn out at both ends are described for the ascospores of L. bipolare, but not L. aquaticum (Hashimoto et al. 2018). There are 3, 31 and 13 nucleotide differences in LSU, ITS and TEF sequence data, respectively, between L. aquaticum MFLUCC 18-1275 and L. bipolare CBS 115375 (ex-type). Thus, L. aquaticum sp. nov. is introduced according to the guideline of Jeewon and Hyde (2016).
*Lentistoma bipolare (K.D. Hyde) A. Hashim., K. Hiray. & Kaz. Tanaka, Stud. Mycol. 90: 169 (2018)
Basionym: Massarina bipolaris K.D. Hyde, Nova Hedwigia 61(1–2): 131 (1995)
Synonymy: Lophiostoma bipolare (K.D. Hyde) E.C.Y. Liew, Aptroot & K.D. Hyde, Mycologia 94(5): 812 (2002)
Freshwater distribution: Australia (Hyde 1995c; Hyde and Aptroot 1998b), Brunei (Ho et al. 2001), China (Hyde 1995a; Tsui et al. 2000; Ho et al. 2001, 2002; Luo et al. 2004), Japan (Hashimoto et al. 2018), Malaysia (Hyde and Aptroot 1998b), Seychelles (Hyde and Goh 1998b), South Africa (Hyde and Goh 1998b), Thailand (Sivichai et al. 2000, 2002), USA (Raja et al. 2009b)
Key to feshwater Lentistoma species
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1.
Ascomata with ostiolar, elongate, laterally compressed neck, surrounded by a well-developed clypeus, ascospores 20–33 × 5.5–9(–11) μm, with a narrow sheath………L. bipolare
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1.
Ascomata with ostiolar, short papilla, ascospores 38–43 × 6.5–8.5 μm, without sheath………L. aquaticum
Lophiostoma Ces. & De Not., Comm. Soc. crittog. Ital. 1(4): 219 (1863)
Saprobic on herbaceous and woody substrates in terrestrial and aquatic habitats. Sexual morph: Ascomata scattered to gregarious, immersed to semi-immersed, papilla erumpent through host surface, uniloculate, globose to subglobose, glabrous, dark brown to black, coriaceous to carbonaceous, ostiolate. Ostiole slit-like, with crest-like apex, usually with a pore opening, plugged by gelatinous tissue. Peridium wider at the apex and thinner at the base, composed of a single stratum, comprising several layers of lightly pigmented to dark brown, thin-walled cells, outer layer fusing and indistinguishable from the host tissues. Pseudoparaphyses numerous, cellular, hypha-like, septate, branched, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, fissitunicate, cylindro-clavate, short to long pedicellate, rounded at the apex with an ocular chamber. Ascospores uni- or partially bi-seriate, fusiform, straight to slightly curved, hyaline to yellowish brown, 1- to multi-septate, sometimes with 3–5-eusepta, constricted at the central septum (Thambugala et al. 2015). Asexual morph: Coelomycetous. Conidiomata scattered or clustered, subglobose with a flattened base, covered with brownish, septate hyphae. Neck central, cylindrical, composed of dark brown, polygonal to subglobose cells. Pycnidial wall slightly thinner at the base, composed of subglobose to polygonal cells. Conidiophores septate, branched, hyaline. Conidiogenous cells phialidic. Conidia ellipsoidal to obovoid, aseptate, hyaline, smooth (Tanaka and Harada 2003b).
Type species: Lophiostoma macrostomum (Tode) Ces. & De Not.
Notes: Lophiostoma is an old genus with over 400 epithets recorded (Index Fungorum 2020). Lophiostoma was confirmed in Lophiostomataceae based on multigene phylogenetic analyses (Thambugala et al. 2015). Hashimoto et al. (2018) revisited 11 species that were classified as Lophiostoma bipolare complex, and proposed five new genera. The asexual morph was found in the culture of L. semiliberum (Desm.) Ces. & De Not. and characterized by subglobose conidiomata covered by hyphae, phialidic conidiogenous cells and ellipsoid to obovoid conidia (Tanaka and Harada 2003b). Six species have been found from freshwater habitats, but none of them is confirmed by molecular evidence. Of the six freshwater species, L. purpurascens is the only species staining the substrate purple (Hyde and Aptroot 1998b). Staining the substrate purple was also observed in other freshwater species, e.g. Amniculicola parva, Jahnula purpurea, Purpureofaciens aquatica (Zhang et al. 2009b; Fournier et al. 2015; this study). Fresh collections are needed to verify the taxonomic placement of these freshwater species.
List of freshwater Lophiostoma species
Lophiostoma aquaticum (J. Webster) Aptroot & K.D. Hyde, Fungal Diversity Res. Ser. 7: 106 (2002)
Basionym: Massarina aquatica J. Webster, Trans. Br. mycol. Soc. 48(3): 451 (1965)
Freshwater distribution: Brunei (Ho et al. 2001), England (Webster 1965), Malaysia (Ho et al. 2001), South Africa (Hyde and Aptroot 1998b; Hyde et al. 1998)
Lophiostoma frondisubmersum (K.D. Hyde) E.C.Y. Liew, Aptroot& K.D. Hyde, Mycologia 94(5): 812 (2002)
Basionym: Massarina fronsisubmersa K.D. Hyde, Mycol. Res. 98(7): 724 (1994)
Freshwater distribution: New Guinea (Hyde 1994), USA (Raja et al. 2009b)
Lophiostoma lunisporum (K.D. Hyde & Goh) Aptroot& K.D. Hyde, Fungal Diversity Res. Ser. 7: 107 (2002)
Basionym: Massarina lunispora K.D. Hyde & Goh, Mycol. Res. 102(6): 741 (1998)
Freshwater distribution: Australia (Hyde and Goh 1998a)
Lophiostoma maquilingense K.D. Hyde and Aptroot, Nova Hedwigia 66(3–4): 499 (1998)
Freshwater distribution: Philippines (Hyde and Aptroot 1998b)
Lophiostoma proprietunicatum K.M. Tsui, K.D. Hyde & Hodgkiss, Fungal Diversity Res. Ser. 7: 107 (2002)
Basionym: Massarina proprietunicata K.M. Tsui, K.D. Hyde & Hodgkiss, Mycol. Res. 103(12): 1575 (1999)
Freshwater distribution: China (Tsui et al. 1999)
Lophiostoma purpurascens (K.D. Hyde & Aptroot) Aptroot & K.D. Hyde, Fungal Diversity Res. Ser. 7: 108 108(2002)
Basionym: Massarina purpurascens K.D. Hyde & Aptroot, Nova Hedwigia 66(3–4): 496 (1998)
Freshwater distribution: Australia (Hyde and Aptroot 1998b), China (Tsui et al. 2000), New Guinea (Hyde and Aptroot 1998b)
Key to freshwater Lophiostoma species
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1.
Often stain the substrate purple………L. purpurascens
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1.
Do not stain substrate purple………2
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2.
Ascospores hyaline, 1-septate………3
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2.
Ascospores initially hyaline, 1-septate, becoming pale brown, 3-septate with age………L. aquaticum
-
3.
Ascospores with appendages………4
-
3.
Ascospores without appendages………L. lunisporum
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4.
Ascomata immersed beneath a darkened, slightly raised pseudostromata……… L. maquilingense
-
4.
Ascomata not as above………5
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5.
Ascospore appendages > 18 μm………L.proprietunicatum
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5.
Ascospore appendages < 18 μm………L. frondisubmersum
Neotrematosphaeria Thambugala, Kaz. Tanaka & K.D. Hyde, Fungal Diversity 74: 223 (2015)
Saprobic on submerged, dead twigs. Sexual morph: Ascomata solitary, semi-immersed to erumpent, uniloculate, subglobose, glabrous, black, coriaceous to carbonaceous, with ostiolate papilla, with a crest-like apex and a pore-like opening. Peridium broad at sides, poorly developed at the base, composed of a single stratum, with several layers of dark brown to black cells of textura prismatica. Pseudoparaphyses numerous, cellular, filiform, indistinctly septate, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, fissitunicate, cylindric-clavate, with a long pedicel, rounded at the apex, with an ocular chamber. Ascospores biseriate to uniseriate near the base, fusiform, mostly curved, pale yellowish to olivaceous brown, but pale at the terminal cells, septate, with bipolar appendages (Tanaka et al. 2005a; Thambugala et al. 2015). Asexual morph: Coelomycetes, pleurophomopsis-like. Conidiomata erumpent to superficial, uniloculate, globose, with thick, brown, sparse hyphae at sides, with ostiolate papilla. Peridium composed of polygonal to globose cells. Conidiophores cylindrical, branched, 0–1-septate. Conidiogenous cells phialidic. Conidia extremely small-sized, subglobose to ellipsoid, straight, hyaline, aseptate, smooth (Tanaka et al. 2005a).
Type species: Neotrematosphaeria biappendiculata (Kaz. Tanaka, Y. Harada & M.E. Barr) Thambug., Kaz. Tanaka & K.D. Hyde
Notes: The monotypic genus Neotrematosphaeria was introduced to accommodate Trematosphaeria biappendiculata Kaz. Tanaka et al. which was isolated from submerged wood in freshwater in Northern Japan (Tanaka et al. 2005a; Thambugala et al. 2015). The pale yellowish to olivaceous brown, 5(–7)-septate ascospores with globose to conical terminal appendages can distinguish Neotrematosphaeria from other genera in Lophiostomataceae.
List of freshwater Neotrematosphaeria species
*Neotrematosphaeria biappendiculata (Kaz.Tanaka, Y. Harada & M.E. Barr) Thambugala, Kaz. Tanaka & K.D. Hyde; Fig. 71
Basionym: Trematosphaeria biappendiculata Kaz. Tanaka, Y. Harada & M.E. Barr, Fungal Diversity 19: 149 (2005)
Freshwater distribution: Japan (Tanaka et al. 2005a)
Neovaginatispora A. Hashim., K. Hiray. & Kaz. Tanaka, Stud. Mycol. 90: 188 (2018)
Saprobic on dead herbaceous twigs and submerged wood. Sexual morph: Ascomata solitary, semi-immersed to erumpent, black, subglobose, coriaceous, ostiolate. Ostiole rounded or slit-like, central, with a pore-like opening. Peridium uneven in width, thinner at the base, two-layered, outer layer fusing with the host cells, inner layer comprising hyaline cells of textura angularis. Pseudoparaphyses numerous, cellular, hypha-like, septate. Asci 8-spored, bitunicate, fissitunicate, cylindric-clavate, with a short, bulbous pedicel, with an indistinct ocular chamber. Ascospores uni- to bi-seriate, fusiform with acute ends, septate, constricted at the septum, hyaline, smooth-walled, with globose appendages at both ends (Hashimoto et al. 2018; Bao et al. 2019c). Asexual morph: Undetermined.
Type species: Neovaginatispora fuckelii (Sacc.) A. Hashim., K. Hiray. & Kaz. Tanaka
Notes: Neovaginatispora was proposed for Vaginatispora fuckelii (Sacc.) Thambug. et al. due to its thinner (up to 25 μm thick) and uniformly thick peridium (Hashimoto et al. 2018). However, the freshwater collection of Neovaginatispora fuckelii found by Bao et al. (2019c) has thicker peridium (up to 40 μm thick) which is thinner at the base. The specimen HHUF 27325 examined by Thambugala et al. (2015) also showed the uneven peridium width. Phylogenetic analyses based on four strains of N. fuckelii guaranteed Neovaginatispora as a distinct genus (Hashimoto et al. 2018; Bao et al. 2019c; this study, Fig. 74).
List of freshwater Neovaginatispora species
*Neovaginatispora fuckelii (Sacc.) A. Hashim., K. Hiray. & Kaz. Tanaka, Stud. Mycol. 90: 188 (2018)
Basionym: Lophiostoma fuckelii Sacc., Michelia 1(no. 3): 336 (1878)
Synonymy: see Index Fungorum (2020)
Freshwater distribution: China (Bao et al. 2019c)
Pseudocapulatispora Mapook & K.D. Hyde, Fungal Diversity 101: 47 (2020)
Saprobic on submerged wood or dead stems. Sexual morph: Ascomata brown to black, solitary or scattered, immersed with papilla erumpent through host surface, ellipsoidal or ovoid, coriaceous, ostiolate. Ostiolar papilla short, blackened, compressed, crest-like. Peridium composed of several layers of brown to dark brown, thin-walled cells. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, sparsely septate, branched. Asci 8-spored, bitunicate, mostly broadly clavate, rarely cylindric-clavate, apically narrowly rounded, with an ocular chamber and a short pedicel. Ascospores biseriate, broadly fusiform, hyaline, septate, mostly rounded or rarely sharply narrowed at two ends, guttulate, thin-walled, smooth, with a narrow, hyaline, elongate sheath (Mapook et al. 2020). Asexual morph: Undetermined.
Type species: Pseudocapulatispora longiappendiculata Mapook & K.D. Hyde
Notes: Pseudocapulatispora longiappendiculata was isolated from a dead stem of Chromolaena odorata in Thailand (Mapook et al. 2020). Pseudocapulatispora is distinct in Lophiostomataceae by its sheath drawn out to form polar appendages with tips of the sheath capped (Mapook et al. 2020). Capulatispora Thambug. & K.D. Hyde has a similar sheath but it mostly has cylindric-clavate asci and fusiform ascospores with narrowed and acute ends (Thambugala et al. 2015). Phylogenetic analysis supported them as distinct genera (Thambugala et al. 2015; Mapook et al. 2020). We collected a new specimen of P. longiappendiculata from freshwater habitats.
List of freshwater Pseudocapulatispora species
*Pseudocapulatispora longiappendiculata Mapook & K.D. Hyde, Fungal Diversity 101: 48 (2020); Fig. 72
Freshwater distribution: China (this study)
Saprobic on submerged wood. Sexual morph: Ascomata 270–310 μm high, 310–330 μm diam., black, scattered, immersed with papilla erumpent through host surface, ellipsoidal, ostiolate. Ostiolar papilla short, blackened, compressed, 110–130 μm high, 160–180 μm wide, composed of dark brown to black, thick-walled cells of textura angularis or subglobose cells, 20–25 μm thick at the base, 70–80 μm thick at the top. Peridium 15–30 μm thick, composed of several layers of brown to dark brown, thin-walled cells of textura angularis or subglobose cells. Pseudoparaphyses 2 μm wide, numerous, trabeculate, filiform, hyaline, sparsely septate, branched. Asci 8-spored, bitunicate, mostly broadly clavate, rarely cylindric-clavate, slightly to obviously curved, (90–)105–130 × 12–17 μm (\( {\bar{\text{x}}} \) = 115 × 14.5 μm, n = 10), apically narrowly rounded, with an ocular chamber and a short pedicel. Ascospores (20.5–)25.5–30 × 6–9 μm (\( {\bar{\text{x}}} \) = 27 × 7 μm, n = 10), biseriate, ellipsoidal, mostly with rounded or rarely acute ends, straight or slightly curved, hyaline, 1-septate, slightly constricted at the septum, slightly constricted at a quarter, guttulate, thin-walled, smooth, with a narrow, hyaline, elongate sheath with globose ending, 30 μm long. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 5 mm in 15 days at 25 °C, white to grey from above, pale yellow to pale brown from below, surface rough, with dense mycelium, dry, raised, edge entire.
Material examined: CHINA, Yunnan Province, Dehong, on submerged wood in a stream, 25 November 2017, G.N. Wang, H39A-1 (MFLU 18-1188), living culture MFLUCC 18-1027; ibid., H39A-2 (HKAS 101722), living culture KUMCC 18-0072.
Notes: Phylogenetic analysis shows our collection MFLUCC 18-1027 is P. longiappendiculata (Fig. 74). MFLUCC 18-1027 has shorter appendages (30 μm vs. 40 μm) than the holotype (Mapook et al. 2020). This is a new habitat and new geographical record for P. longiappendiculata from freshwater in China.
Sigarispora Thambug. & K.D. Hyde, Fungal Diversity 74: 238 (2015)
Saprobic on decaying culms of grasses (Poaceae), dead herbaceous stems or submerged wood. Sexual morph: Ascomata solitary, scattered to gregarious, semi-immersed to immersed, with papilla erumpent through host surface, globose to subglobose, black, ostiolate. Ostiole crest- or slit-like, central, rounded, with a pore-like opening and plugged by gelatinous tissue, comprising pseudoparenchymatous cells. Peridium composed of light to dark brown, small, thin-walled cells of textura angularis, fusing with the host tissues in outer layer. Pseudoparaphyses numerous, cellular, long, hyaline, septate, branched. Asci 8-spored, bitunicate, fissitunicate, cylindric-clavate, pedicellate, with an ocular chamber. Ascospores uni- to bi-seriate, yellowish brown to dark brown, cigar-shaped or ellipsoidal-fusiform, transversely septate or muriform, smooth-walled, with or without a mucilaginous sheath, sometimes with terminal appendages (Thambugala et al. 2015). Asexual morph: Undetermined.
Type species: Sigarispora ravennica (Tibpromma, Camporesi & K.D. Hyde) Thambug. & K.D. Hyde
Notes: Sigarispora was introduced for some lophiostoma-like species (Thambugala et al. 2015). Sigarispora is phylogenetically separated from Lophiostoma (Thambugala et al. (2015); this study, Fig. 74) and characterized by yellowish brown to dark brown, cigar-shaped or ellipsoidal-fusiform ascospores which are unlike the hyaline to yellowish brown, fusiform ascospores of Lophiostoma. Bao et al. (2019c) reported a freshwater species S. clavata D.F. Bao et al. from China and characterized by dark brown to yellowish brown, ellipsoidal to clavate ascospores.
List of freshwater Sigarispora species
*Sigarispora clavata D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Mycosphere 10: 1090 (2019)
Freshwater distribution: China (Bao et al. 2019c)
Vaginatispora K.D. Hyde, Nova Hedwigia 61(1-2): 234 (1995)
Saprobic on submerged wood, intertidal wood, dead twigs, endocarp or fallen fruit pericarp. Sexual morph: Ascomata solitary or scattered, immersed to erumpent, uniloculate, subglobose, glabrous, dark brown to black. Ostiolar neck crest-like, elongate, laterally compressed, composed of globose to elongate, brown to black cells, with a pore-like opening and hyaline periphyses. Peridium unequal in thickness, two-layered, outer layer comprising somewhat flattened cells, fusing and indistinguishable from the host tissues, inner layer comprising lightly pigmented to hyaline cells. Pseudoparaphyses numerous, cellular, hypha-like, hyaline, septate, anastomosing above the asci. Asci 8-spored, bitunicate, fissitunicate, cylindrical to clavate, with a short or long pedicel, apically round with an ocular chamber. Ascospores uni- to bi-seriate, narrowly ellipsoidal or fusiform, straight to slightly curved, hyaline, 1-septate, occasionally producing pseudosepta, septum mostly median, upper cell slightly broader than lower cell, smooth, thin-walled, with bipolar appendages or entire sheath (Hyde 1995b). Asexual morph: Undetermined.
Type species: Vaginatispora aquatica K.D. Hyde
Notes: Vaginatispora aquatica was collected from North Queensland, Australia (Hyde 1995b). Zhang et al. (2014a) transferred V. aquatica to Lophiostoma because it formed a basal clade to Lophiostoma species with high bootstrap support and morphologically resembles L. macrostomum (type species), in having immersed to erumpent ascomata with a slit-like ostiole, an unequally thick peridium, clavate asci, and hyaline ascospores (Hyde 1995b; Zhang et al. 2014a). With more sequences added in Lophiostomataceae, Vaginatispora (typified by V. aquatica) was accepted as a distinct genus in Lophiostomataceae (Thambugala et al. 2015). The freshwater collections of V. armatispora (K.D. Hyde et al.) Wanas. et al. were found from Thailand (Bao et al. 2019c; Hyde et al. 2019).
List of freshwater Vaginatispora species
*Vaginatispora aquatica K.D. Hyde, Nova Hedwigia 61(1–2): 235 (1995); Fig. 73
Synonymy: Lophiostoma vaginatispora H. Zhang & K.D. Hyde, Phytotaxa 176(1): 177 (2014)
Freshwater distribution: Australia (Hyde 1995b), China (Tsui et al. 2000), Thailand (Zhang et al. 2014a)
*Vaginatispora armatispora (K.D. Hyde, Vrijmoed, Chinnaraj & E.B.G. Jones) Wanas., E.B.G. Jones & K.D. Hyde, Stud. Fung. 1(1): 62 (2016)
Basionym: Massarina armatispora K.D. Hyde, Vrijmoed, Chinnaraj & E.B.G. Jones, Bot. Mar. 35(4): 325 (1992)
Synonymy: Lophiostoma armatisporum (K.D. Hyde, Vrijmoed, Chinnaraj & E.B.G. Jones) E.C.Y. Liew, Aptroot & K.D. Hyde, Mycologia 94(5): 812 (2002)
Freshwater distribution: Thailand (Hu et al. 2010b; Bao et al. 2019c; Hyde et al. 2019)
Key to freshwater Vaginatispora species
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1.
Ascospores 33–45 × 11–12.5 μm, with a mucilaginous collar around its equator, surrounded by a spreading papilionaceous sheath………V. aquatica
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1.
Ascospores 22–34 × 5.5–9 μm, surrounded by a narrow mucilaginous sheath, with distinct hyaline appendages at both ends………V. armatispora
Lophiotremataceae K. Hiray. & Kaz. Tanaka, Mycoscience 52(6): 405 (2011)
Lophiotrema Sacc., Michelia 1(no. 3): 338 (1878)
Saprobic on woody and herbaceous substrates or submerged wood. Sexual morph: Ascomata scattered to crowded, mostly immersed, rarely erumpent, uniloculate, globose, subglobose to ovoid, glabrous, dark brown to black, opening compressed, with a slit-like ostiole. Peridium composed of pale brown, small, thin-walled cells of textura angularis to globosa. Pseudoparaphyses numerous, cellular, hyaline, septate, occasionally anastomosing or branching. Asci 8-spored, bitunicate, fissitunicate, cylindrical, sessile to minutely pedicellate, rounded at the apex, with an ocular chamber. Ascospores uni- to bi-seriate, fusiform to cylindrical, straight to slightly curved, hyaline to brown, septate, symmetrical, smooth, thin-walled (Hirayama and Tanaka 2011; Hyde et al. 2013). Asexual morph: probably pleurophomopsis-like (Leuchtmann 1985).
Type species: Lophiotrema nucula (Fr.) Sacc.
Notes: Lophiotrema is distinguished from Lophiostoma by subglobose to globose ascomata, peridium composed thin-walled cells of textura angularis to globosa, cylindrical asci with a short pedicel, and hyaline to brown, septate ascospores (Hirayama and Tanaka 2011; Hyde et al. 2013). Hirayama and Tanaka (2011) mentioned that the ascal shape, including length of the ascal pedicel, was a reliable taxonomic indicator to separate these two genera (cylindrical, up to 15 µm long in Lophiotrema vs. clavate, mostly (10–)15–30 µm long in Lophiostoma). Based on multigene phylogenetic analysis, Lophiotrema was placed in Lophiotremataceae, which was distant from Lophiostomataceae (Hirayama and Tanaka 2011). Pleurophomopsis Petr. was linked to the asexual morph of Lophiotrema, which formed in culture of L. nucula (Leuchtmann 1985), but Hyde et al. (2013) considered that it was probably a spermatial state.
The freshwater species Lophiotrema rubi (Fuckel) Y. Zhang ter et al. is characterized by hemispherical to pyriform ascomata with black clypeus formed around the neck, broadly cylindrical asci with a hoof-shaped pedicel, and broadly fusiform, hyaline ascospores with bipolar appendages (Fallah and Shearer 2001). Lophiotrema rubi was transferred from Massarina rubi (CBS 691.95) based on multigene phylogenetic analysis (Zhang et al. 2009c). Lophiotrema rubi is likely an immigrant to freshwater because most reports are from terrestrial habitats (Fallah and Shearer 2001).
List of freshwater Lophiotrema species
Lophiotrema rubi (Fuckel) Y. Zhang ter, C.L. Schoch & K.D. Hyde, Stud. Mycol. 64: 97 (2009)
Basionym: Massaria rubi Fuckel, Jb. nassau. Ver. Naturk. 25-26: 303 (1871)
Synonymy: Didymellina rhaphithamni Keissl., Nat. Hist. Juan Fernandez Easter Isl. 2: 480 (1927)
Lophiostoma rubi (Fuckel) E.C.Y. Liew, Aptroot & K.D. Hyde, Mycologia 94(5): 812 (2002)
Lophiotrema emergens P. Karst., Hedwigia 22: 42 (1883)
Massarina emergens (P. Karst.) L. Holm, Les Pleosporaceae: 149 (1957)
Massarina rubi (Fuckel) Sacc., Syll. fung. (Abellini) 2: 155 (1883)
Mycosphaerella rhaphithamni (Keissl.) Petr., Annls mycol. 38(2/4): 221 (1940)
Freshwater distribution: USA (Fallah and Shearer 2001)
Massarinaceae Munk, Friesia 5(3-5): 305 (1956)
Key to freshwater genera of Massarinaceae
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1.
Ascospores basically symmetric, unevenly coloured, brown in central two cells and paler in end cells at maturity………Byssothecium
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1.
Ascospores asymmetric, upper cell longer and larger than lower cell, evenly coloured, medium to dark brown at maturity………Helminthosporium
Byssothecium Fuckel, Bot. Ztg. 19: 251 (1861)
Saprobic on submerged wood in freshwater or decaying wood in terrestrial habitats. Sexual morph: Ascomata gregarious, erumpent to superficial, uniloculate, subglobose, ovoid to obpyriform, black, coriaceous, with a central ostiolate papilla. Peridium composed of brown, rectangle, pseudoparenchymatous cells, somewhat thinner at base. Pseudoparaphyses dense, cellular, hypha-like, hyaline, septate, embedded in a gelatinous matrix, anastomosing between and above the asci. Asci 8-spored, bitunicate, fissitunicate, cylindrical to clavate, pedicellate. Ascospores biseriate at the apex, becoming uniseriate near the base, ellipsoidal to fusiform, straight to slightly curved, hyaline to brown, usually paler at end cells, septate, basically symmetric, smooth to minutely verrucose, thin-walled (Crane et al. 1992; Pem et al. 2019b). Asexual morph: chaetophoma-like (Boise 1983).
Type species: Byssothecium circinans Fuckel
Notes: Byssothecium is characterized by ellipsoidal to fusiform, hyaline to brown ascospores usually with bipolar paler cells (Crane et al. 1992; Pem et al. 2019b). The asexual morph of B. circinans was produced in culture and characterized by minute conidiomata, phialidic conidiogenous cells and hyaline, aseptate conidia, which are similar to Chaetophoma (Boise 1983).
Savoryella E.B.G. Jones & R.A. Eaton shares similar morphological characters with Byssothecium in having cylindrical asci, ellipsoidal, 3-septate ascospores with brown central cells and paler end cells (Jones and Eaton 1969; Dayarathne et al. 2019). The ascomata have a long neck in Savoryella, but it is lacking in Byssothecium. Phylogeny separates them in different classes: Byssothecium in Dothideomycetes (Lumbsch and Lindemuth 2001), and Savoryella in Sordariomycetes (Dayarathne et al. 2019) (Fig. 74).
One putative strain of Byssothecium circinans (CBS 675.92) clustered in Massarinaceae in Schoch et al. (2009). Zhang et al. (2009d) found that B. circinans clustered basal to Melanommataceae based on combined LSU and SSU dataset, while clustered in Massarinaceae based on RPB2 dataset. Because B. circinans considerably differs from Massarina in morphology, such as black, erumpent ascomata, ellipsoidal to fusiform ascospores with pigmented central cells and hyaline end cells (Crane et al. 1992), and had an unstable relationships in the phylognetic tree (Zhang et al. 2009d). Byssothecium circinans was not assigned to Melanommataceae and treated as an unresolved species (Zhang et al. 2009c, d). Based on combined LSU, SSU and RPB2 dataset, B. circinans formed a stable clade in Melanommataceae (Zhang et al. 2012b; Hyde et al. 2013; Tanaka et al. 2015; Voglmayr and Jaklitsch 2017; Pem et al. 2019b; this study, Fig. 2).
The morphology of strain Byssothecium circinans (CBS 675.92) is unavailable, a specimen G-K 18367 of B. circinans was examined by Pem et al. (2019b) and also examined in this study (Fig. 75). Two Byssothecium species were reported from freshwater habitats (see list below), but not confirmed by molecular data.
List of freshwater Byssothecium species
*Byssothecium circinans Fuckel, Bot. Ztg. 19: 251 (1861); Fig. 75
Synonymy: Possible synonymy see Index Fungorum (2020)
Freshwater distribution: Hungary (Révay and Gönczöl 1990; Gönczöl and Révay 1993)
Byssothecium flumineum J.L. Crane, Shearer & Huhndorf, Mycologia 84(2): 236 (1992)
Freshwater distribution: USA (Crane et al. 1992)
Key to freshwater Byssothecium species
-
1.
Ascospores 7.3−9.2 µm wide………B. flumineum
-
1.
Ascospores 10−12 µm wide………B. circinans
Helminthosporium Link, Mag. Gesell. naturf. Freunde, Berlin 3(1–2): 10 (1809)
Synonym: Exosporium Link, Mag. Gesell. naturf. Freunde, Berlin 3(1–2): 9 (1809)
Saprobic on submerged wood, various dead plant material or rarely parasitic on plants or fungicolous. Sexual morph: Pseudostromata dark brown or reddish brown, pseudoparenchymatous, of thick-walled dark brown cells; margin mostly composed of dark brown, verrucose hyphae. Ascomata immersed in pseudostromata, solitary or in small groups, large, often strongly depressed, or globose, dark brown to black, with a central, inconspicuous ostiole. Peridium pseudoparenchymatous. Pseudoparaphyses numerous, cellular, septate, branched, anastomosing, narrow, usually embedded in a gel matrix. Asci 8-spored, bitunicate, fissitunicate, clavate or fusoid, short pedicellate. Ascospores irregularly biseriate, fusoid, ellipsoidal, obovoid, occasionally oblong, asymmetric, with one primary, eccentric, deeply constricted euseptum, upper cell longer and larger than lower cell, often with several transverse or oblique distosepta, rarely with a longitudinal distoseptum in the larger cell, slightly or not constricted at the secondary distosepta, hyaline when young, becoming medium to dark brown when mature, with subacute to rounded end cells, smooth or verruculose, sometimes with longitudinal striae, surrounded by a thick gelatinous sheath (Voglmayr and Jaklitsch 2017). Asexual morph: Colonies on natural substrate conspicuous, effuse to punctiform, hairy, brown to black. Mycelium mostly immersed, composed of branched, septate hyphae. Conidiophores macronematous, mononematous, arising solitarily or in fascicles, erect, mostly unbranched, straight or flexuous, cylindrical or subulate, with a well-defined small pore at the apex, and often with several lateral pores beneath the upper septa, ceasing growth with the formation of a terminal conidium, usually not proliferating, pale to dark brown, smooth or occasionally verruculose. Conidiogenous cells enteroblastic, polytretic, integrated, determinate, terminal and intercalary, subcylindrical. Conidia mostly solitary, acropleurogenous, obclavate, obpyriform to lageniform, mostly rostrate, straight or curved, pale brown to brown, distoseptate, smooth, with a paler apical cell and truncate base, often with a prominent, dark brown or black scar at the base (Ellis 1971; Zhu et al. 2016; Voglmayr and Jaklitsch 2017).
Type species: Helminthosporium velutinum Link [as ‘Helmisporium’], Mag. Gesell. naturf. Freunde, Berlin 3(1-2): 10 (1809)
Notes: Helminthosporium is an old genus which was introduced in 1809 and currently comprises over 750 epithets in Index Fungorum (2020). Helminthosporium is morphologically similar to Corynespora Güssow and Exosporium Link as all of them have distoseptate conidia with tapering apex and truncate base, growing through a wide pore at the apex of the conidiophores (Ellis 1971; Voglmayr and Jaklitsch 2017). Exosporium has been synonymized with Helminthosporium based on their very similar morphological characters (Fries 1832) and this was accepted by Voglmayr and Jaklitsch (2017) with molecular data supported. Corynespora differs from Helminthosporium as conidiophores have successive proliferations (up to four), while they are not described in Helminthosporium (Voglmayr and Jaklitsch 2017). Phylogenetically, Corynespora has been placed in Corynesporascaceae, while Helminthosporium clustered in Massarinaceae (Voglmayr and Jaklitsch 2017; this stuy, Fig. 2).
The massaria- and splachnonema-like sexual morphs have been linked to Helminthosporium based on cultural studies and sequence data (Tanaka et al. 2015; Voglmayr and Jaklitsch 2017). Both sexual and asexual morphs can be observed in H. massarinum Kaz. Tanaka et al., H. microsorum D. Sacc., H. oligosporum (Corda) S. Hughes, H. quercicola (M.E. Barr) Voglmayr & Jaklitsch, H. quercinum Voglmayr & Jaklitsch. and H. tiliae (Link) Fr. (Tanaka et al. 2015; Voglmayr and Jaklitsch 2017). The sexual morph of the type species H. velutinum Link is still unknown. The sexual genus Byssothecium has a relationship with Helminthosporium in Massarinaceae (Fig. 2), however, they can be distinguished by ascospore characters (see key to freshwater genera of Massarinaceae).
Helminthosporium species are commonly collected from terrestrial habitats worldwide as mentioned in Voglmayr and Jaklitsch (2017). Zhu et al. (2016) reported two species H. aquaticum H.Y. Su et al. and H. velutinum (type) from freshwater habitats in China (see list below) and no sexual morphs were observed. We do not make a key for these two species as they are morphologically very similar and they have overlapping size in all structures. Even though, multigene phylogenetic analyses supported them to be different species (Zhu et al. 2016; Voglmayr and Jaklitsch 2017). We believe that sexual morphs of H. aquaticum and H. velutinum will separate them clearly in future.
List of freshwater Helminthosporium species
*Helminthosporium aquaticum H.Y. Su, Z.L. Luo & K.D. Hyde, Phytotaxa 253(3): 184 (2016)
Freshwater distribution: Yunnan, China (Zhu et al. 2016)
*Helminthosporium velutinum Link [as ‘Helmisporium’], Mag. Gesell. naturf. Freunde, Berlin 3(1-2): 10 (1809)
Freshwater distribution: Yunnan, China (Zhu et al. 2016)
Melanommataceae G. Winter [as ‘Melanommeae’], Rabenh. Krypt.-Fl., Edn 2 (Leipzig) 1.2: 220 (1885)
Key to freshwater genera of Melanommataceae
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1.
Asexual morph………Camposporium
-
1.
Sexual morph………2
-
2.
Ascospores dimorphic………Mamillisphaeria
-
2.
Ascospores monomorphic………3
-
3.
Ascomata glabrous………Melanomma
-
3.
Ascomata spread on substrate as a subiculum or covered by hyphae………4
-
4.
Ascomata immersed or erumpent………Herpotrichia
-
4.
Ascomata superficial, with red or orange at pore………Byssosphaeria
Byssosphaeria Cooke, Grevillea 7(no. 43): 84 (1879)
Saprobic on woody angiosperms or submerged wood. Sexual morph: Ascomata solitary, scattered to gregarious, superficial, uniloculate, globose, subglobose or ovoid, with basal subiculum and covered by thick, branched hyphae, dark brown to black, coriaceous, central ostiolate, red or orange at pore, without papilla. Peridium two-layered, outer layer composed of irregular, thick-walled, brown to dark brown cells of textura epidermoidea, inner layer composed of small thin-walled, pale brown cells. Pseudoparaphyses dense, trabeculate, long, embedded in mucilage, anastomosing between and above asci. Asci 8-spored, bitunicate, fissitunicate, cylindro-clavate to clavate, with short pedicel, apically rounded with an ocular chamber. Ascospores uni- to bi-seriate, fusiform, tapering at both ends, mostly straight, sometimes slightly curved, hyaline to pale brown, 1-septate, verrucose (Tian et al. 2015). Asexual morph: Coelomycetous. Pycnidia formed in culture. Conidiogenous cells phialidic, lining cavity. Conidia hyaline, ellipsoid or subglobose (Barr 1984).
Type species: Byssosphaeria keithii (Berk. & Broome) Cooke [as ‘keitii’]
Notes: Byssosphaeria is characterized by superficial ascomata with bright yellow, orange or red, flat apices around the ostiole, with thick, branched hyphae, and hyaline to pale brown ascospores (Tian et al. 2015). Byssosphaeria differs from Herpotrichia Fuckel in having superficial ascomata with red or orange at pore (Zhang et al. 2012b; Tian et al. 2015). Byssosphaeria was shown to belong to Melanommataceae based on molecular data of some species (Zhang et al. 2012b; Tian et al. 2015). Sequence data of the type species B. keithii are unavailable. The freshwater species B. schiedermayeriana (Fuckel) M.E. Barr was found from Seychelles, but not supported by molecular data. Three terrestrial strains of B. schiedermayeriana clustered in Melanommataceae with good bootstrap support (Liu et al. 2015; Tian et al. 2015).
List of freshwater Byssosphaeria species
*Byssosphaeria schiedermayeriana (Fuckel) M.E. Barr, Mycotaxon 20(1): 34 (1984)
Basionym: Herpotrichia schiedermayeriana Fuckel, Jb. nassau. Ver. Naturk. 27-28: 27 (1874)
Synonymy: see Index Fungorum (2020)
Freshwater distribution: Seychelles (Hyde and Goh 1998b)
Camposporium Harkn., Bull. Calif. Acad. Sci. 1(no. 1): 37 (1884)
Saprobic on decaying wood, bark and fruit of various trees and shrubs in terrestrial or freshwater habitats. Sexual morph: Undetermined. Asexual morph: Colonies effuse, grey, brown to black. Mycelium immersed or partly superficial on host substrate. Conidiophores macro- or micronematous, mononematous, often short, straight or irregularly bent, unbranched, pale brown to dark brown. Conidiogenous cells mono- or polyblastic, integrated, terminal, sympodial, cylindrical or subulate, denticulate. Conidia solitary, dry, multiseptate, pale brown, often unevenly coloured, the end cells subhyaline, smooth, mostly cylindrical, rounded or tapering at the apex, sometimes rostrate, with or without appendages (Ellis 1971; Hyde et al. 2020b).
Type species: Camposporium antennatum Harkn.
Notes: Camposporium is an old genus and characterized by short conidiophores, denticulate conidiogenous cells, and cylindrical, multi-septate, uneven coloured conidia often with single or several cylindrical appendages (Ellis 1971; Hyde et al. 2020b). Camposporium had a relationship with Fusiconidium Jun F. Li et al., but they can be distinguished by conidiogenous cells and conidial shape (Li et al. 2017; Hyde et al. 2020b). They are treated as distinct genera until their relationships are well-resolved (Hyde et al. 2020b). The type species, C. antennatum, represented by a strain CBS 113441 was placed in Melanommataceae (Hyde et al. 2020b). Other Camposporium species clustered with C. antennatum, but with low bootstrap support (Hyde et al. 2020b). A freshwater species C. septatum N.G. Liu et al. formed a well-supported clade with Fusiconidium species (Hyde et al. 2020b). However, C. septatum was placed in Camposporium, rather than Fusiconidium, based on its monoblastic conidiogenous cells and cylindrical conidia with several appendages at the apex (Hyde et al. 2020b). Both C. appendiculatum D.F. Bao et al. and C. multiseptatum D.F. Bao et al. have tapering apical cell with truncate ends, while C. antennatum has rounded apex (Ellis 1971; Hyde et al. 2020b). Camposporium hyalinum Abdullah and C. marylandicum Shearer have the typical apical appendages of Camposporium, but they have hyaline conidia which are different from the brown, unevenly coloured conidia of the other freshwater species (Shearer 1974; Abdullah 1980; Hyde et al. 2020b). The molecular data of these two species are needed to confirm their phylogenetic placement. Camposporium species need further study with more collections.
List of freshwater Camposporium species
*Camposporium appendiculatum D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Fungal Diversity 100: 77 (2020)
Freshwater distribution: China (Hyde et al. 2020b)
Camposporium hyalinum Abdullah, Trans. Br. mycol. Soc. 75(3): 514 (1981) [1980]
Freshwater distribution: UK (Abdullah 1980)
Camposporium marylandicum Shearer, Mycologia 66(1): 16 (1974)
Freshwater distribution: USA (Shearer 1974)
*Camposporium multiseptatum D.F. Bao, Z.L. Luo, K.D. Hyde & H.Y. Su, Fungal Diversity 100: 82 (2020)
Freshwater distribution: China (Hyde et al. 2020b)
*Camposporium pellucidum (Grove) S. Hughes, Mycol. Pap. 36: 9 (1951)
Freshwater distribution: China (Hyde et al. 2020b)
*Camposporium septatum N.G. Liu, J.K. Liu & K.D. Hyde, Fungal Diversity 100: 85 (2020)
Freshwater distribution: Thailand (Hyde et al. 2020b)
Key to freshwater Camposporium species
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1.
Conidial apex without apppendages………C. pellucidum
-
1.
Conidial apex with appendages………2
-
2.
Conidia with 2–3 appendages………C. septatum
-
2.
Conidia with a single appendage………3
-
3.
Conidia 2–4(–6)-septate………C. hyalinum
-
3.
Conidia > 5-septate………4
-
4.
Conidia 5–10-septate………C. marylandicum
-
4.
Conidia 10–13-septate………5
-
5.
Conidial apppendages 72–114 μm long………C. appendiculatum
-
5.
Conidial apppendages 11–17 μm long………C. multiseptatum
Herpotrichia Fuckel, Fungi rhenani exsic., suppl., fasc. 7(nos 2101-2200): no. 2171 (1868)
Saprobic, parasitic or hyperparasitic in terrestrial or freshwater habitats. Sexual morph: Ascomata scattered to gregarious, immersed, erumpent to nearly superficial, subglobose to pyriform, dark brown to black, spreading on substrate as a subiculum, coriaceous, roughened, with ostiolate papilla. Peridium two-layered, outer layer composed of pigmented, thick-walled cells of textura angularis, inner layer composed of light pigmented, thin-walled cells of textura prismatica. Pseudoparaphyses dense, cellular, hypha-like, hyaline, septate, branched and anastomosing above asci, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, fissitunicate, cylindrical to cylindro-clavate, with a furcate pedicel, apically rounded with an ocular chamber. Ascospores uni- to bi-seriate, fusoid, ellipsoidal or oblong, straight, hyaline to pale brown, 1-septate, thin-walled, smooth or verruculose (Tian et al. 2015). Asexual morph: Coelomycetous. pyrenochaeta- or pyrenochaeta-like. Pycnidia solitary or gregarious, superficial, globose to pyriform or hemispherical, with or without hairs, with ostiolate papilla, with a long or short neck. Peridium composed of cells of textura angularis. Conidiophores absent. Conidiogenous cells phialidic, simple, cylindrical, branched. Conidia globose to ovoid or cylindrical, straight or curved, hyaline, aseptate (Bose 1961; Sivanesan 1984; Tian et al. 2015).
Type species: Herpotrichia herpotrichoides (Fuckel) P.F. Cannon
Notes: The type species of Herpotrichia was not indicated when it was introduced (Fuckel 1868). Herpotrichia herpotrichoides was accepted as the type species (Cannon 1982; Wijayawardene et al. (2017). The holotype of H. rubi Fuckel (an earlier name of H. herpotrichoides) was examined by Tian et al. (2015) and characterized by ascomata spreading on substrate as a subiculum and with a black, roughened wall. Herpotrichia is polyphyletic (Tian et al. 2015). Herpotrichia dalisayi K.D. Hyde & Aptroot is the only freshwater species in the genus (Hyde and Aptroot 1998a). Herpotrichia dalisayi is characterized by superficial or partially immersed ascomata with a tangle of dark brown subiculum and 1–5-septate ascospores, which are characteristics of Herpotrichia (Hyde and Aptroot 1998a). However, the phylogenetic placement of H. dalisayi in Herpotrichia is pending confirmation with molecular data. Herpotrichia dalisayi has larger ascospores (53–60 × 16–18 μm) than other Herpotrichia species (Barr 1984; Hyde and Aptroot 1998a).
List of freshwater Herpotrichia species
Herpotrichia dalisayi K.D. Hyde & Aptroot, Nova Hedwigia 66(1-2): 249 (1998)
Freshwater distribution: Philippines (Hyde and Aptroot 1998a)
Mamillisphaeria K.D. Hyde, S.W. Wong & E.B.G. Jones, Nova Hedwigia 62(3–4): 514 (1996)
Saprobic on submerged wood. Sexual morph: Ascomata scattered to gregarious, superficial, conical, dark brown to black, carbonaceous, with ostiolate papilla, under a pseudostroma that forms a thin layer on the host surface. Peridium thick, composed of several layers of compressed, hyaline cells, with palisade-like cells at the sides. Pseudoparaphyses dense, trabeculate, long, hyaline, septate, branching and anastomosing above the asci, embedded in a gelatinous matrix. Two types of asci and ascospores: TYPE 1: Asci 8-spored, bitunicate, fissitunicate, cylindro-clavate, short pedicellate, apically rounded with an ocular chamber. Ascospores 2–4-seriate, ellipsoidal, hyaline, 1-septate, symmetric, with pad-like, mucilaginous appendage at each end and with some mucilage associated around the spore. TYPE 2: Asci 8-spored, bitunicate, fissitunicate, cylindrical, pedicellate, with an ocular chamber and faint apical ring. Ascospores uni- to bi-seriate, ellipsoidal-fusoid, brown, 1-septate, asymmetric, with a thin mucilaginous sheath (Tian et al. 2015). Asexual morph: Undetermined.
Type species: Mamillisphaeria dimorphospora K.D. Hyde, S.W. Wong & E.B.G. Jones
Notes: The monotypic genus Mamillisphaeria is typified by a freshwater species M. dimorphospora which is strikingly characterized by dimorphic ascospores (Hyde et al. 1996b), reminiscent of Aliquandostipite siamensis (Pang et al. 2002). However, they differ in ascomata (globose to subglobose, with stalk in A. siamensis vs. conical, without stalk in M. dimorphospora) and sheath (ascospores without sheath in A. siamensis vs. both types of ascospores with mucilaginous sheaths in M. dimorphospora) (Hyde et al. 1996b; Pang et al. 2002). Aliquandostipite siamensis clustered in Aliquandostipitaceae (Fig. 14), while Tian et al. (2015) placed M. dimorphospora in Melanommataceae, but based on morphology. Sequence data of M. dimorphospora is needed to clarify its phylogenetic placement.
List of freshwater Mamillisphaeria species
Mamillisphaeria dimorphospora K.D. Hyde, S.W. Wong & E.B.G. Jones, Nova Hedwigia 62(3–4): 515 (1996); Fig. 76
Freshwater distribution: Australia (Bareen and Iqbal 1994; Hyde et al. 1996b; Vijaykrishna and Hyde 2006), Brunei (Ho et al. 2001), Malaysia (Ho et al. 2001)
Melanomma Nitschke ex Fuckel, Jb. nassau. Ver. Naturk. 23–24: 159 (1870) [1869–70]
Saprobic or parasitic on wood and bark in terrestrial and freshwater habitats. Sexual morph: Ascomata gregarious, immersed, erumpent to nearly superficial, uniloculate, globose to subglobose, conical, often laterally flattened, black, coriaceous, often puckered or sulcate, with ostiolate papilla. Peridium two-layered, arranged in textura angularis, outer layer comprising small, heavily pigmented, thick-walled cells, inner layer comprising of hyaline to lightly pigmented, thin-walled cells. Pseudoparaphyses dense, trabeculate, filamentous, hyaline, indistinctly septate, branching and rarely anastomosing above the asci. Asci 8-spored, bitunicate, fissitunicate, cylindrical to fusoid, with a short pedicel, apically rounded with an ocular chamber. Ascospores uniseriate, fusoid, pale brown to brown, septate, the second cell from the apex slightly wider than the others, smooth-walled (Tian et al. 2015). Asexual morph: Coelomycetous. Conidiomata superficial, globose, black, ostiolate. Mycelium immersed. Peridium two-layered. Conidiophores cylindrical, septate, hyaline. Conidiogenous cells phialidic, hyaline, smooth. Conidia cylindrical or ellipsoidal, hyaline, aseptate (Sutton 1980).
Type species: Melanomma pulvis-pyrius (Pers.) Fuckel
Notes: As the holotype of Melanomma pulvis-pyrius was not validly designated, a neotype and epitype were designated (Holm 1957; Zhang et al. 2008b). Melanomma pulvis-pyrius clustered with an asexual morphic species Aposphaeria populina Died., but they are not recognized as congeneric until the type species of Aposphaeria is obtained (Tian et al. 2015). The freshwater species M. australiense K.D. Hyde & Goh normally has larger ascospores than other Melanomma species (Hyde and Goh 1999b). The phylogenetic placement of M. australiense needs confirmation by molecular data.
List of freshwater Melanomma species
Melanomma australiense K.D. Hyde & Goh, Nova Hedwigia 68(1–2): 256 (1999); Fig. 77
Freshwater distribution: Australia (Hyde and Goh 1999b; Vijaykrishna and Hyde 2006)
Morosphaeriaceae Suetrong, Sakay., E.B.G. Jones & C.L. Schoch, Stud. Mycol. 64: 161 (2009)
Key to freshwater genera of Morosphaeriaceae
-
1.
Asci with uncoiled endoascus and hyaline ascospores………Aquihelicascus
-
1.
Asci with coiled endoascus and brown ascospores………Neohelicascus
Helicascus Kohlm., Can. J. Bot. 47: 1471 (1969)
Saprobic on rotten roots in sea water, intertidal wood of mangrove. Sexual morph: Pseudostromata immersed to semi-immersed, lenticular, solitary to clustered, dark brown to black, carbonaceous, enclosing single or multi-locules, which are horizontally arranged under a black pseudoclypeus, ostiolate. Pseudoclypeus composed of host cells enclosed in black fungal hyphae, isodiametric or elongate cells formed between locules. Pseudoparaphyses numerous, trabeculate, filiform, persistent, hyaline, septate, anastomosing, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, fissitunicate, subcylindrical, pedicellate, with an ocular chamber, endoascus coiled at first and finally stretching in water. Ascospores uniseriate, obovoid, straight to slightly curved, brown, asymmetrical, unequally 2-celled, with larger apical cells and smaller basal cells, sometimes at one or both ends apiculate, septate, smooth or verrucose, with or without a mucilaginous sheath. Asexual morph: Undetermined.
Type species: Helicascus kanaloanus Kohlm.
Notes: Helicascus kanaloanus was isolated from rotten roots in sea water (Kohlmeyer 1969). Sequences are available in GenBank for all Helicascus species. Helicascus comprises three species, viz. H. kanaloanus, H. mangrovei Preedanon et al. and H. nypae K.D. Hyde, representing a distinct marine genus which is characterized by subcylindrical asci, uniseriate, obovoid, brown, asymmetrical ascospores. We exclude other species to Helicascus and place them in two new genera, Aquihelicascus and Neohelicascus, based on strong morphological and molecular evidence.
Aquihelicascus W. Dong, H. Zhang & Doilom, gen. nov.
Index Fungorum number: IF557806; Facesoffungi number: FoF08721
Etymology: referring to the aquatic habitat and its similarity to Helicascus
Saprobic on submerged wood. Sexual morph: Pseudostromata scattered, comprising brown to black fungal material growing in cortex of host cells, uni- or multi-loculate, flattened at the basal region, horizontally arranged under the pseudostroma, carbonaceous or coriaceous, visible on the host surface as blackened ostiolar dots. Locules immersed, compressed subglobose to lenticular or sometimes triangular, with ostiolate papilla. Ostiole central, rounded, periphysate. Peridium comprising several layers of thin-walled angular cells, hyaline inwardly and dark at the outside, fusing with the host cells. Pseudoparaphyses numerous, cellular, hyaline, indistinctly septate, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, clavate, long pedicellate, endoascus uncoiled, apically rounded, with an indistinct or distinct, trapezoidal ocular chamber. Ascospores mostly biseriate, sometimes overlapping uniseriate, straight or slightly curved, ellipsoidal to fusiform, with rounded ends, 1-septate, almost symmetrical, constricted at the septum, hyaline, smooth, thin-walled, lacking a mucilaginous sheath or appendage. Asexual morph: Undetermined.
Type species: Aquihelicascus thalassioideus (K.D. Hyde & Aptroot) W. Dong & H. Zhang
Notes: Aquihelicascus is introduced to accommodate one new comination A. thalassioideus and two new species A. songkhlaensis and A. yunnanensis. Aquihelicascus differs from Helicascus in having clavate asci with uncoiled endoascus, and biseriate, ellipsoidal, symmetrical, hyaline ascospores with rounded ends. In contrast, Helicascus has subcylindrical asci with coiled endoascus, and uniseriate, obovoid, asymmetrical, brown ascospores with apiculate ends (Kohlmeyer 1969; Hyde 1991; Preedanon et al. 2017). All Aquihelicascus species were collected from freshwater habitats, whereas Helicascus species are from marine habitats. Aquihelicascus and Helicascus clustered separately in phylogenetic analyses (Zhang et al. 2013a; Luo et al. 2016b; Preedanon et al. 2017; this study, Fig. 84) which supports the placement of two different genera.
Aquihelicascus species have hyaline ascospores and are morphologically very similar. Among them, A. songkhlaensis possesses two-loculate pseudostromata and A. thalassioideus has the widest peridium. The phylogenetic analysis and single gene comparison can easily separate them.
List of freshwater Aquihelicascus species
*Aquihelicascus songkhlaensis W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557919; Facesoffungi number: FoF09261; Fig. 78
Etymology: referring to songkhla, where the holotype was collected
Holotype: MFLU 18-1511
Saprobic on decaying wood submerged in freshwater. Sexual morph: Pseudostromata 380–430 μm high, 820–870 μm wide, scattered, comprising brown to black fungal tissues growing in cortex of host, with two locules, flattened at the basal region, horizontally arranged under the pseudostroma, visible on the host surface as blackened ostiolar dots. Locules 170–270 × 350–430 μm, immersed, lenticular, coriaceous, with ostiolate papilla. Ostiole converging at the centre, subcylindrical, black. Peridium of locules, 25–35 μm thick, comprising 8–11 layers of brown to dark brown, thin-walled, compressed cells of textura angularis, fusing with the host cells. Pseudoparaphyses 3 μm diam., numerous, cellular, hypha-like, hyaline, distantly septate. Asci 110–145(–160) × 16–18 μm (\( {\bar{\text{x}}} \) = 130 × 17 μm, n = 10), 8-spored, bitunicate, clavate, long pedicellate, up to 50 μm long, apically rounded with an indistinct ocular chamber. Ascospores 24–28 × 8–10 μm (\( {\bar{\text{x}}} \) = 25.7 × 9.4 μm, n = 20), overlapping biseriate, straight or slightly curved, hyaline, 1-septate, constricted at the septum, symmetrical, ellipsoidal with rounded ends, with 2–4 prominent big guttules when immature, smooth, thin-walled, lacking a mucilaginous sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 10 mm in 13 days at 25 °C, white to pale grey from above, dark brown from below, surface rough, dry, raised, edge entire.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, 20180508-1 (MFLU 18-1511, holotype), ex-type living culture MFLUCC 18-1154; ibid., 20180508-2 (HKAS 105006, isotype), ex-type living culture KUMCC 19-0022; Nakhon Si Thammarat Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat6107-1 (MFLU 18-1716), living culture MFLUCC 18-1273; ibid., hat6107-2 (HKAS 105028), living culture KUMCC 19-0043; Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat8114-1 (MFLU 18-1702), living culture MFLUCC 18-1278; ibid., hat8114-2 (HKAS 105036), living culture KUMCC 19-0051.
Notes: Aquihelicascus songkhlaensis clusters with A. yunnanensis in our phylogenetic tree (Fig. 84). They share similar morphological characters of clavate asci, ellipsoidal, hyaline, 1-septate, symmetrical ascospores and are from freshwater habitats and they have overlapping ascospore size. However, A. songkhlaensis can be distinguished by its two-loculate pseudostromata contrasting with one-loculate in A. yunnanensis. There are 12, 16 and 14 nucleotide differences between ex-type strains of the two species in LSU, ITS and TEF sequence data, respectively. Following the guideline of Jeewon and Hyde (2016), A. songkhlaensis sp. nov. is introduced here.
*Aquihelicascus thalassioideus (K.D. Hyde & Aptroot) W. Dong & H. Zhang, comb. nov.
Index Fungorum number: IF557920; Facesoffungi number: FoF09262; Fig. 79
Basionym: Massarina thalassioidea K.D. Hyde & Aptroot, Nova Hedwigia 66(3–4): 498 (1998)
Synonymy: Helicascus thalassioideus (K.D. Hyde & Aptroot) H. Zhang & K.D. Hyde, Sydowia 65(1): 159 (2013)
Freshwater distribution: Australia (Hyde and Aptroot 1998b), Brunei (Hyde and Aptroot 1998b), China (Tsui et al. 2000; Ho et al. 2001; Luo et al. 2004), French West Indies, Martinique (Zhang et al. 2015), Peru (Shearer et al. 2015), Janpan (Tanaka et al. 2015), Philippines (Hyde and Aptroot 1998b), Thailand (Kurniawati et al. 2010; Zhang et al. 2013a; this study)
Saprobic on decaying wood submerged in freshwater. Sexual morph: Pseudostromata clustered, immersed, visible on the host surface as blackened ostiolar dots. Pseudoparaphyses 1–3 μm diam., abundant, cellular, hypha-like, hyaline, septate, embedded in a gelatinous matrix. Asci 150–190 × 14.5–23 μm (\( {\bar{\text{x}}} \) = 175 × 17.5 μm, n = 5), 8-spored, bitunicate, fissitunicate, clavate, long pedicellate, up to 90 μm long. Ascospores 24–28 × 7–10 μm (\( {\bar{\text{x}}} \) = 25.5 × 8.5 μm, n = 25), overlapping uni- to bi-seriate, sometimes overlapping tri-seriate, ellipsoidal, hyaline, 1-septate, constricted at septum, curved, thin-walled, smooth. Asexual morph: Undetermined (detailed description see Hyde and Aptroot (1998b) and Zhang et al. (2013a)).
Material examined: THAILAND, Chiang Rai Province, on submerged wood in a stream, 1 July 2018, W. Dong, CR134-1 (MFLU 18-1705), living culture KUMCC 19-0094; ibid., CR134-2 (HKAS 105076).
Notes: Our new collection KUMCC 19-0094 is identified as Aquihelicascus thalassioideus based on multigene phylogenetic analysis (Fig. 84). The morphological features of our collection also fits well with A. thalassioideus except for the long pedicel, which is probably because of the pedicel spreading in water (Fig. 79). Most publications do not report an ascospore sheath for A. thalassioideus except Zhang et al. (2015) who noted some fugacious mucilaginous remnants visible in Indian Ink when ascospores were just released from the asci. This character was not observed in our collection.
*Aquihelicascus yunnanensis W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557921; Facesoffungi number: FoF09263; Fig. 80
Etymology: referring to Yunnan, where the holotype was collected
Holotype: MFLU 18-1170
Saprobic on decaying wood submerged in freshwater. Sexual morph: Pseudostromata 150–180 μm high, 420–480 μm diam., scattered, comprising brown to black fungal tissues growing in cortex of host, uniloculate, lenticular, immersed with blackened ostiolar dots on the host surface. Ostiole central, opening rounded, periphysate. Peridium 15–25 μm thick, comprising several layers of brown to dark brown, thin-walled, compressed, elongate cells of textura angularis, pale brown to hyaline inwardly. Pseudoparaphyses 1.5–2.5 μm diam., numerous, cellular, hypha-like, short, hyaline, sparsely septate, unbranched. Asci 120–140 × 13.5–19 μm (\( {\bar{\text{x}}} \) = 132 × 17 μm, n = 10), 8-spored, bitunicate, clavate, apically narrowly rounded, with a distinct, trapezoidal chamber, long pedicellate, up to 40 μm. Ascospores 25–28 × 9–10.5 μm (\( {\bar{\text{x}}} \) = 27 × 10 μm, n = 10), biseriate, ellipsoidal, rounded at both ends, straight or slightly curved, hyaline, 1-septate, constricted at the septum, symmetrical, guttulate, two prominent guttules near the septa and with additionally smaller ones beside, smooth, thin-walled, lacking a mucilaginous sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 5 mm in 15 days at 25 °C, white to grey from above, brown from below, surface rough, fluffy, with dense mycelium, dry, raised, edge entire.
Material examined: CHINA, Yunnan Province, Dehong, on submerged wood in a stream, 25 November 2017, G.N. Wang, H35A-1 (MFLU 18-1170, holotype), ex-type living culture MFLUCC 18-1025; ibid., H35A-2 (HKAS 101719, isotype), ex-type living culture KUMCC 18-0069.
Notes: Aquihelicascus yunnanensis clusters with A. songkhlaensis in our multigene phylogenetic analysis (Fig. 84). However, the number of locules in pseudostromata, single gene comparison (see notes under A. songkhlaensis) and phylogenetic analysis (Fig. 84) separate them to be different species.
Aquihelicascus yunnanensis is morphologically similar to A. thalassioideus in having clavate asci, and ellipsoidal, hyaline, 1-septate, guttuate ascospores (Zhang et al. 2013a). However, A. yunnanensis has a thinner peridium (15–25 μm vs. 70 μm) than A. thalassioideus. There are 10 and 32 nucleotide differences in LSU and ITS sequence data between A. yunnanensis (MFLUCC 18-1025) and A. thalassioideus (MFLUCC 10-0911), respectively, which indicates them to be different species.
Key to freshwater Aquihelicascus species
-
1.
Pseudostromata multi-loculate………A. songkhlaensis
-
1.
Pseudostromata uni-loculate………2
-
2.
Peridium 15–25 μm thick………A. yunnanensis
-
2.
Peridium up to 70 μm thick………A. thalassioideus
Neohelicascus W. Dong, H. Zhang, K.D. Hyde & Doilom, gen. nov.
Index Fungorum number: IF557807; Facesoffungi number: FoF08722
Etymology: referring to its morphological similarity to Helicascus
Saprobic on submerged wood. Sexual morph: Pseudostromata scattered, comprising brown to black fungal material growing in cortex of host, unil- or multi-loculate, flattened at the basal region, horizontally arranged under the pseudostroma, visible on the host surface as blackened ostiolar dots. Locules immersed, lenticular to ampulliform, ostiolate. Ostiole converging at the centre, uniting into one common, central pore, periphysate. Peridium of locules comprising several layers of brown, thin-walled angular cells, paler inwardly, fusing with the host cells. Pseudoparaphyses numerous, cellular, hypha-like, hyaline, septate, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, fissitunicate, clavate, long pedicellate, base of endoascus long, narrow and coiled within ectoascus, ectoascus uncoiling to form a long tail-like extension, apically rounded with a cylindrical ocular chamber. Ascospores mostly biseriate, straight or slightly curved, ellipsoidal to broadly fusiform, with rounded ends, 1–(2–3)-septate, apical cell slightly larger than basal cell, brown, thin-walled, smooth- or rough-walled, with or without a deliquescing sheath (Zhang et al. 2013a). Asexual morph: Coelomycetous. Pycnidia solitary, superficial, with the base immersed, uniloculate, globose to subglobose, brown, coriaceous, central ostiolate, with minute papilla. Peridium composed of brown, thin-walled cells of textura angularis. Conidiophores reduced to conidiogenous cells. Conidiogenous cells holoblastic, determinate, cylindrical to subcylindrical, hyaline, smooth. Conidia ellipsoid to obovoid, hyaline, aseptate, occasionally two-celled, smooth, thin-walled, without sheath or appendage (Zhang et al. 2013a).
Type species: Neohelicascus aquaticus (H. Zhang & K. D. Hyde) W. Dong & H. Zhang
Notes: Neohelicascus is introduced to accommodate the new species N. submersus H. Yang et al. and another seven new combinations as listed below. Neohelicascus is distinguished from Aquihelicascus in producing brown ascospores and the base of endoascus is long, narrow and coiled within ectoascus which uncoils to form a long tail-like extension. In contrast, Aquihelicascus possesses hyaline ascospores and an uncoiled endoascus. Phylogenetic analysis supports two genera, Aquihelicascus and Neohelicascus (Fig. 84).
The ascospores of Neohelicascus egyptiacus and N. elaterascus are surrounded by a defined gelatinous sheath, which is absent in N. unilocularis (Zhang et al. 2013a, 2015). Neohelicascus gallicus is surrounded by some fugacious mucilaginous remnants, but only seen in ascospores that are just released from the asci (Zhang et al. 2014b). Neohelicascus aquaticus was characterized by 1–(2– or 3–) septate ascospores with a deliquescing sheath (Zhang et al. 2013a), although Tanaka et al. (2015) observed only 1-septate ascospores without a sheath from a Japanese collection. Neohelicascus aquaticus is the only species producing asexual morph in culture (Zhang et al. 2013a).
List of freshwater Neohelicascus species
*Neohelicascus aquaticus (H. Zhang & K. D. Hyde) W. Dong, K.D. Hyde & H. Zhang, comb. nov.
Index Fungorum number: IF557922; Facesoffungi number: FoF09264; Fig. 81
Basionym: Helicascus aquaticus H. Zhang & K.D. Hyde, Sydowia 65(1): 155 (2013)
Synonymy: Helicascus alatus M. Zeng, S.K. Huang, Q. Zhao & K.D. Hyde, Phytotaxa 351(3): 215 (2018)
Freshwater distribution: China (Zeng et al. 2018; this study), Japan (Tanaka et al. 2015), Thailand (Zhang et al. 2013a)
Saprobic on decaying wood submerged in freshwater. Sexual morph: Pseudostromata clustered, immersed, ampulliform, coriaceous, with ostiolate papilla, visible on the host surface as blackened ostiolar dots. Pseudoparaphyses 1–3 μm diam., abundant, cellular, hypha-like, hyaline, septate, embedded in a gelatinous matrix. Asci 90–120 × 14–21 μm (\( {\bar{\text{x}}} \) = 110 × 19 μm, n = 5), 8-spored, bitunicate, fissitunicate, clavate, pedicellate. Ascospores 20–23 × 8–10 μm (\( {\bar{\text{x}}} \) = 22 × 8.5 μm, n = 15), mostly biseriate, ellipsoidal, brown, 1-septate, slightly constricted at septum, asymmetrical, apical cell usually longer than basal cell, curved, thin-walled, smooth, with a deliquescing sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 40 mm in 50 days at 25 °C, reddish brown to black from above, reddish brown from below, surface rough, dry, umbonate, edge entire.
Material examined: CHINA, Yunnan Province, Qujing, on submerged wood in a stream, 10 May 2017, C.X. Liu, L25 (HKAS 102145), living culture KUMCC 19-0107.
Notes: The LSU and ITS sequence data from our collection HKAS 102145 shows 100% identity with the sequences of Helicascus aquaticus (MFLUCC 10-0918). HKAS 102145 fits well with the morphological features of H. aquaticus (Zhang et al. 2013a). However, we did not observe the 3-septate ascospores and asexual morph in culture.
Helicascus alatus was introduced by Zeng et al. (2018) based on multigene phylogenetic analysis and morphological characters. Zeng et al. (2018) considered that H. alatus differs from H. aquaticus in smaller ascomata, short pedicels and presence of a sheath. However, a comparion of nucleotides shows that H. alatus (MFLUCC 17-2300) and H. aquaticus (MFLUCC 10-0918) have identical sequences in LSU and ITS sequence data. Additionally, there are only two nucleotide differences in TEF sequence data between H. alatus (MFLUCC 17-2300) and H. aquaticus (MAFF 243866), thus H. alatus is a synonymy of H. aquaticus. Phylogenetic analysis supports these strains to be the same species (Fig. 84).
*Neohelicascus chiangraiensis (Z.L. Luo, J.K Liu, H.Y. Su & K.D. Hyde) W. Dong, K.D. Hyde & H. Zhang, comb. nov.
Index Fungorum number: IF557923; Facesoffungi number: FoF09265
Basionym: Helicascus chiangraiensis Z.L. Luo, H.Y. Su & K.D. Hyde, Phytotaxa 270(3): 185 (2016)
Freshwater distribution: Thailand (Luo et al. 2016b)
*Neohelicascus egyptiacus (Abdel-Wahab & Abdel-Aziz) W. Dong, K.D. Hyde & H. Zhang, comb. nov.
Index Fungorum number: IF557924; Facesoffungi number: FoF09266
Basionym: Helicascus egyptiacus Abdel-Wahab & Abdel-Aziz [as ‘aegyptiacus’], Sydowia 65(1): 153 (2013)
Freshwater distribution: Egypt (Zhang et al. 2013a)
*Neohelicascus elaterascus (Shearer) W. Dong, K.D. Hyde & H. Zhang, comb. nov.
Index Fungorum number: IF557925; Facesoffungi number: FoF09267; Fig. 82
Basionym: Kirschsteiniothelia elaterascus Shearer, Mycologia 85:963 (1993).
Synonymy: Morosphaeria elaterascus (Shearer) S. Boonmee & K.D. Hyde, Mycologia 103: 705 (2012)
Helicascus elaterascus (Shearer) H. Zhang & K.D. Hyde, Sydowia 65: 158 (2013)
Freshwater distribution: Brunei (Ho et al. 2001), Chile (Shearer 1993b), China (Tsui et al. 2000; Luo et al. 2004), Japan (Tanaka et al. 2015), Peru (Shearer et al. 2015), South Africa (Hyde et al. 1998), Thailand (Hyde et al. 2020a; this study), USA (Shearer 1993b; Raja et al. 2009b)
Saprobic on decaying wood submerged in freshwater. Sexual morph: Pseudostromata 205–250 μm high, 170–200 μm diam., clustered, immersed, unilocular, mammiform, coriaceous, with ostiolate papilla, visible on the host surface as blackened ostiolar dots. Peridium 20–30 μm thick, comprising several layers of brown, thin-walled, pseudoparenchymatous cells, outer layer partially occluded with the host cells, deeply pigmented, inwardly hyaline, forming a textura angularis in the upper regions and a textura prismatica at sides and angles of base. Pseudoparaphyses 1–3 μm diam., abundant, cellular, cylindrical, hyaline, sparsely septate. Asci 95–130 × 17–24 μm (\( {\bar{\text{x}}} \) = 112 × 21 μm, n = 15), 8-spored, bitunicate, fissitunicate, clavate, endoascus separating from ectoascus at time of ectoascus dehiscence, base of endoascus long, narrow and coiled within ectoascus, up to 210 μm long. Ascospores 23–28 × 8–11 μm (\( {\bar{\text{x}}} \) = 25 × 9 μm, n = 25), overlapping uni- or bi-seriate, sometimes overlapping tri-seriate, ellipsoidal, brown, 1-septate, constricted at septum, asymmetrical, apical cell slightly longer than basal cell, curved, thin-walled, smooth in optical microscope, surrounded by a gelatinous sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 40 mm in 45 days at 25 °C, dark brown to black from above, black from below, surface rough, dry, raised, edge undulate.
Material examined: THAILAND, Phayao Province, on submerged wood in a stream, 23 February 2018, X.D. Yu, Y19 (MFLU 18-0997), living culture MFLUCC 18-0985; Chiang Mai Province, Mushroom Research Center, on submerged wood in a stream, 2 April 2018, X.D. Yu, Y29 (MFLU 18-1007), living culture MFLUCC 18-0993.
Notes: Our new collections MFLUCC 18-0985 and MFLUCC 18-0993 are identified as Neohelicascus elaterascus based on morphological and molecular evidence (Fig. 84). Shearer (1993b) described verrucose ascospores from the holotype (C-76-1), while our collections have smooth ascospores which are also described by Hyde et al. (2020a). Helicascus elaterascus is commonly reported on submerged wood from many countries as listed above.
*Neohelicascus gallicus (Y. Zhang ter & J. Fourn) W. Dong, K.D. Hyde & H. Zhang, comb. nov.
Index Fungorum number: IF557926; Facesoffungi number: FoF09268
Basionym: Helicascus gallicus Y. Zhang ter & J. Fourn., Phytotaxa 183: 185 (2014)
Freshwater distribution: France (Zhang et al. 2014b)
*Neohelicascus submersus H. Yang, W. Dong, K.D. Hyde & H. Zhang, sp. nov.
Index Fungorum number: IF557927; Facesoffungi number: FoF09269; Fig. 83
Etymology: referring to submerged habitat of this fungus
Holotype: MFLU 20-0436
Saprobic on submerged wood. Sexual morph: Pseudostromata 485–540 μm high, 315–510 μm diam., scattered, comprising dark brown to black fungal tissues growing in cortex of host, immersed, unilocular, lenticular, flattened at the base, black, with wide ostiole, visible as elongate, prominent, black neck erumpent on the host surface. Neck 310–320 × 125–165 μm, central, cylindrical, with periphyses. Peridium 20–45 μm thick, comprising several layers of dark brown cells of textura epidermoidea. Pseudoparaphyses 1.5–2.5 μm wide, numerous, cellular, cylindrical, hyaline, indistinctly septate. Asci 120–165 × 17.5–21 μm (\( {\bar{\text{x}}} \) = 143 × 19 μm, n = 10), 8-spored, bitunicate, fissitunicate, cylindrical to narrowly clavate, apically rounded, base of endoascus long, narrow and coiled within ectoascus, up to 150 μm long. Ascospores 23.5–31 × 8.5–11.5 μm, (\( {\bar{\text{x}}} \) = 27 × 10 μm, n = 30), obliquely arranged, overlapping uniseriate or occasionally biseriate, ellipsoidal to fusiform, slightly curved, 1-septate, constricted at the septum, upper cell slightly wider than lower cell, hyaline when young, become brown when mature, guttulate, thin-walled, smooth, covered by a distinct gelatinous sheath, 1.5–5.5 μm wide, showing 15–27 μm wide in Indian Ink. Asexual morph: Undetermined.
Cultural characteristics: Conidia germinated on PDA within 24 hours. Germ tubes arising from end of the ascospore. Colonies on PDA reaching 30 mm diameter in 30 days at 20–25 °C, initially white, turning reddish brown to dark brown after 15 days, with dense, hairy mycelium on the surface, with undulate, red margin, reverse reddish brown.
Material examined: CHINA, Yunnan Province, a small river in Puzhehei wetland, on submerged wood, 23 June 2019, H. Yang, P36 (MFLU 20-0436, holotype), ex-type living culture KUMCC 20–0153.
Notes: Neohelicascus submersus forms a well-supported clade with four species N. elaterascus, N. egyptiacus, N. unilocularis and N. uniseptatus (Fig. 84). Neohelicascus submersus resembles N. elaterascus in having unilocular pseudostromata, and ellipsoidal to fusiform, brown ascospores with a distinct gelatinous sheath (Shearer 1993b). However, N. elaterascus has shorter and wider asci (95–149 × (14–)18–25(–38) μm vs. 120–165 × 17.5–21 μm) and ascospores are mostly biseriate and verrucose in the holotype C-76-1 (Shearer 1993b). Our two collections of N. elaterascus (MFLUCC 18-0993 and MFLUCC 18-0985) have smooth ascospores, which are similar to N. submersus, but phylogenetic analysis separate them as distinct species (Fig. 84).
Neohelicascus submersus is phylogenetically closest to N. unilocularis (Fig. 84). They have overlapping ascospore size, however, N. submersus has longer and thinner asci (120–165 × 17.5–21 μm vs. 70–75 × 22–27 μm) than N. unilocularis (Zhang et al. 2015). Neohelicascus submersus has a distinct gelatinous ascospore sheath, 1.5–5.5 μm wide, showing 15–27 μm wide in Indian Ink, but it is lacking in N. unilocularis. There are two and 39 nucleotide differences in LSU and ITS sequence data between N. submersus (KUMCC 20–0153) and N. unilocularis (MJF 14020), which indicates them to be different species (Jeewon and Hyde 2016).
*Neohelicascus unilocularis (J. Fourn. & Y. Zhang ter) W. Dong, K.D. Hyde & H. Zhang, comb. nov.
Index Fungorum number: IF557928; Facesoffungi number: FoF09270
Basionym: Helicascus unilocularis J. Fourn. & Y. Zhang ter, Mycol. Progr. 14(7/47): 3 (2015)
Freshwater distribution: French West Indies, Martinique (Zhang et al. 2015)
*Neohelicascus uniseptatus (J. Yang, J.K. Liu & K.D. Hyde) W. Dong, K.D. Hyde & H. Zhang, comb. nov.
Index Fungorum number: IF557929; Facesoffungi number: FoF09271
Basionym: Helicascus uniseptatus J. Yang, J.K. Liu & K.D. Hyde, Phytotaxa 270(3): 187 (2016)
Freshwater distribution: Thailand (Luo et al. 2016b)
Key to freshwater Neohelicascus species
-
1.
Pseudostromata uni-loculate………2
-
1.
Pseudostromata mostly multi-loculate………6
-
2.
Ascospores rough-walled………3
-
2.
Ascospores smooth-walled………4
-
3.
Peridium 60–70 μm, ascospores 1–(2–3)-septate………N. elaterascus
-
3.
Peridium 30–50 μm, ascospores 1-septate………N. chiangraiensis
-
4.
Ascospores with sheath………N. submersus
-
4.
Ascospores lacking sheath or with deliquescing sheath………5
-
5.
Peridium 50–65 μm, ascospores (21.6–)23–25.8(–27.3) × (9.2–)10.2–11.4(–11.7) μm……… N. unilocularis
-
5.
Peridium 40–48 μm, ascospores 25–32 × 9–13 μm………N. uniseptatus
-
6.
Ascospores rough-walled………N. aegyptiacus
-
6.
Ascospores smooth-walled………7
-
7.
Ascospores (24.2–)25.1–31.3(–33) × (8.8–)9.3–12.1(–12.6) μm………N. gallicus
-
7.
Ascospores 19−26 × 8−11 μm………N. aquaticus
Occultibambusaceae D.Q. Dai & K.D. Hyde, Fungal Diversity 82: 25 (2016)
Occultibambusa D.Q. Dai & K.D. Hyde, Fungal Diversity 82: 26 (2016)
Saprobic on dead bamboo culms or submerged wood. Sexual morph: Ascostromata solitary, scattered, or in small groups, immersed under host tissue, visible as dark, round, black spots on host surface, uniloculate, subglobose or conical in section, black at ostiolar region, coriaceous, with a central papilla and rounded ostiole, internally lined with periphyses. Peridium comprising host and fungal tissues, composed of brown and thick-walled cells in outer layer, hyaline and thin-walled cells inwardly, arranged in textura angularis. Pseudoparaphyses numerous, cellular, long, hypha-like, septate. Asci 8-spored, bitunicate, broadly cylindrical to clavate, with a short pedicel and an ocular chamber. Ascospores bi- to tri-seriate, broadly fusiform to narrowly fusiform, some with acute ends, 1-septate, slightly constricted at the septum, pale brown to brown, straight to curved (Dai et al. 2017). Asexual morph: Coelomycetous. Pycnidia eustromatic, solitary to gregarious, immersed to partly-immersed, globose to subglobose, black, with a short, black papilla. Peridium comprising several layers of hyaline to dark cells of textura angularis. Conidiophores reduced to conidiogenous cells. Conidiogenous cells enteroblastic, phialidic, determinate, ampulliform to cylindrical, hyaline, smooth-walled. Conidia oblong, rounded at the apex, aseptate, hyaline to pale brown, straight, smooth-walled (Dai et al. 2017).
Type species: Occultibambusa bambusae D.Q. Dai & K.D. Hyde
Notes: Occultibambusa species commonly occur on culms of bamboo (Hyde et al. 2016b; Dai et al. 2017; Zhang et al. 2017b). Occultibambusa is characterized by uniloculate ascostromata, broadly cylindrical to clavate asci and fusiform, 1-septate ascospores (Dai et al. 2017). The asexual morph developed in a culture of O. fusispora Phook. et al. with oblong, hyaline to pale brown, aseptate conidia (Dai et al. 2017). Occultibambusa species cluster in a well-supported clade, except O. fusispora and O. maolanensis Jin F. Zhang et al. cluster with Versicolorisporium triseptatum Sat. Hatak. et al. in a separated clade (Fig. 89).
Occultibambusa aquatica H. Zhang & K.D. Hyde was isolated from submerged bamboo in Thailand and was characterized by 1-septate ascospores which become 3-septate when germinated (Hyde et al. 2016b). The two additional septa formed at maturity and they were also observed in two other freshwater species, O. kunmingensis sp. nov. and O. pustula D.Q. Dai & K.D. Hyde. Three freshwater species can be distinguished by ascospore size (see key below).
List of freshwater Occultibambusa species
*Occultibambusa aquatica H. Zhang & K.D. Hyde, Fungal Diversity 80: 81 (2016); Fig. 85
Freshwater distribution: Thailand (Hyde et al. 2016b)
*Occultibambusa kunmingensis C.X. Liu, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557930; Facesoffungi number: FoF09272; Fig. 86
Etymology: referring to Kunming, where the holotype was collected
Holotype: HKAS 102151
Saprobic on decaying bamboo submerged in freshwater. Sexual morph: Ascomata 110–150 μm high, 220–260 μm diam., black, scattered, semi-immersed to superficial, with a short neck, ellipsoidal, ostiolate, flattened at the base. Ostiolar neck black, short, always broken off, with a large opening on the surface of ascomata. Peridium 30–50 μm thick, thin at the base and becoming wider laterally, composed of several layers of brown to dark brown, thin-walled cells of textura angularis. Pseudoparaphyses 2.2 μm wide, cellular, hypha-like, hyaline, septate. Asci 8-spored, bitunicate, clavate or cylindric-clavate, 110–140(–160) × 13–16.5 μm (\( {\bar{\text{x}}} \) = 127 × 15.5 μm, n = 10), narrowly rounded at the apex, with a distinct ocular chamber, pedicellate. Ascospores 32–40 × 5–6.5 μm (\( {\bar{\text{x}}} \) = 35.5 × 5.5 μm, n = 30), 3–4-seriate, fusiform, straight or curved, brown, 1-septate, becoming 3-septate when germinated, constricted at the septa, upper cell slightly shorter and wider than lower part, guttulate, thin-walled, smooth, without any mucilaginous sheaths and appendages. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 30 mm in 30 days at 25 °C, dark brown from above, black from below, surface rough, with dense mycelium, dry, raised, edge entire.
Material examined: CHINA, Yunnan Province, Kunming University of Science and Technology, on submerged bamboo in a stream, 10 May 2017, C.X. Liu, L62 (HKAS 102151, holotype).
Notes: Occultibambusa kunmingensis is morphologically similar to O. jonesii in having cylindrical to clavate asci, fusiform, curved, brown, guttulate ascospores without any mucilaginous sheaths and appendages (Zhang et al. 2017b). However, O. kunmingensis has longer asci (110–140(–160) × 13–16.5 μm vs. (65–)75–89(–105) × 13.5–19 μm) and ascospores (32–40 × 5–6.5 μm vs. 27–33.5 × 5.5–6.5 μm). Occultibambusa kunmingensis has a prominent, black, short neck, which is absent in O. jonesii (Zhang et al. 2017b). Phylogenetic analysis supports our collection to be a new species (Fig. 89).
*Occultibambusa pustula D.Q. Dai & K.D. Hyde, Fungal Diversity 82: 30 (2016); Fig. 87
Freshwater distribution: China (this study)
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 190–220 μm high, 320–350 μm diam., black, scattered, immersed with proliferating papilla erumpent through host surface, ellipsoidal, ostiolate. Papilla 60–80 μm high, 25–70 μm wide, obvious short cylindrical, central ostiolate, periphysate. Peridium 25–90 μm thick, composed of several layers of brown to black, thin-walled cells of textura angularis, flattened and thin at the base, with palisade-shaped cells near the base. Pseudoparaphyses 2–3 μm wide, numerous, cellular, hypha-like, hyaline, septate. Asci 8-spored, bitunicate, mostly broadly clavate or sometimes narrowly clavate, (60–)78–125 × 12.5–15.5 μm (\( {\bar{\text{x}}} \) = 90 × 14 μm, n = 15), apically rounded, with an ocular chamber, 2.8 μm high × 3.8 μm wide, short or long pedicellate and up to 37 μm long when mature. Ascospores 22–29 × 6–8 μm (\( {\bar{\text{x}}} \) = 27 × 7.5 μm, n = 20), uni- to bi-seriate, fusiform, mostly slightly curved towards different directions at each end, pale brown and 1-septate when young, brown, 3-septate and deeply pigmented at septa when mature, becoming dark brown in central two cells and hyaline to pale brown in bipolar cells, constricted at the septa, guttulate, thin-walled, smooth, without sheath. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 15 mm in 25 days at 25 °C, dark grey from above, black from below, surface rough, with dense mycelium, dry, raised, edge entire.
Material examined: CHINA, Yunnan Province, Dehong, on submerged wood in a stream, 25 November 2017, G.N. Wang, H1B-1 (MFLU 18-1208), living culture MFLUCC 18-1028; ibid., H1B-2 (HKAS 101724), living culture KUMCC 18-0074.
Notes: Our collection MFLUCC 18-1028 clusters with Occultibambusa pustula MFLUCC 18-1028 with high bootstrap support (Fig. 89). Occultibambusa pustula only has LSU and ITS sequence data in GenBank. They have identical LSU sequence data and three nucleotide differences in ITS sequence data between MFLUCC 18-1028 and MFLUCC 11-0502, which indicate them to be the same species.
Occultibambusa pustula was collected from dead culm of bamboo in Thailand and characterized by immersed ascomata with central ostiole, cylindrical asci, and fusiform, 1-septate, hyaline to pale brown ascospores (Dai et al. 2017). Our collection has very similar morphological characters with O. pustula and they have overlapping ascus and ascospore size. The holotype of O. pustula studied by Dai et al. (2017) was immature as shown in their photo plate, and thus we describe more details for this species from our mature collection MFLUCC 18-1028. In our collection, the ascospores are initially pale brown and 1-septate, which are similar to the holotype. At maturity, ascospores become brown, 3-septate, deeply pigmented at septa, and with two dark brown central two cells and hyaline to pale brown end cells. In addition, we observed prominent cylindrical papilla and palisade-shaped cells near the ascomatal base, which were not described in the holotype. Based on phylogenetic analysis (Fig. 89) and morphological characters, we identify our collection MFLUCC 18-1028 as O. pustula. This is a new habitat and geographical record for O. pustula from freshwater in China.
Key to freshwater Occultibambusa species
-
1.
Ascospores 32–40 × 5–6.5 μm………O. kunmingensis
-
1.
Ascospores < 32 μm long………2
-
2.
Ascospores have two dark brown central cells and hyaline to pale brown end cells when mature………O. pustula
-
2.
Ascospores are evenly coloured when mature………O. aquatica
Seriascoma Phook., D.Q. Dai & K.D. Hyde, Fungal Diversity 82: 30 (2016)
Saprobic on decaying or submerged bamboo culms. Sexual morph: Ascostromata gregarious, immersed beneath clypeus, coriaceous, uni- to multi-loculate, ostiolate, with slit-like opening. Locules arranged in rows, immersed, subglobose to ampulliform, or quadrilateral, with ostiolate papilla. Peridium thick-walled, composed of several layers of small, dark brown, pseudoparenchymatous cells of textura angularis. Pseudoparaphyses numerous, cellular, hypha-like, broadly filamentous, hyaline, septate. Asci 8-spored, bitunicate, fissitunicate, clavate, long pedicellate, apically rounded, with a well-developed, ocular chamber. Ascospores uni- to tri-seriate, clavate to fusiform, hyaline, septate (Dai et al. 2017). Asexual morph: Coelomycetous. Conidiomata eustromatic, solitary to gregarious, immersed, conical, uniloculate, black. Peridium comprising host and fungal tissue, with several layers of dark brown to black, pseudoparenchymatous cells of textura angularis. Conidiophores reduced to conidiogenous cells. Conidiogenous cells phialidic, determinate, discrete, cylindrical to ampulliform or lageniform, hyaline. Conidia oblong, hyaline, aseptate (Dai et al. 2017).
Type species: Seriascoma didymosporum Phook., D.Q. Dai, Karun. & K.D. Hyde
Notes: The monotypic genus Seriascoma, typified by S. didymosporum, was introduced by Dai et al. (2017). The asexual morph was produced on WA with oblong, hyaline, aseptate conidia, which are similar to Occultibambusa fusispora (Dai et al. 2017). However, the sexual morph of Seriascoma is characterized by elongate, multiloculate ascostromata with a slit-like opening, which are different to the uniloculate ascostromata with a central papilla of Occultibambusa. Seriascoma formed a distinct clade and nested in Occultibambusaceae with high bootstrap support (Dai et al. 2017; Tibpromma et al. 2018). We re-collected the type species S. didymosporum from submerged wood in China.
List of freshwater Seriascoma species
*Seriascoma didymosporum Phook., D.Q. Dai, Karun. & K.D. Hyde [as ‘didymospora’], Fungal Diversity 82: 32 (2016); Fig. 88
Freshwater distribution: China (this study)
Saprobic on submerged wood. Sexual morph: Ascomata 120–170 μm high, 200–250 μm diam., gregarious, immersed to erumpent in linear rows, raised, coriaceous, uniloculate, ostiolate. Peridium 30–50 μm wide, unequal in thickness, composed of several layers of large, dark brown pseudoparenchymatous cells of textura angularis. Pseudoparaphyses 2.5–4 μm wide, numerous, cellular, hypha-like, broadly filamentous, hyaline, septate. Asci 70–95 × 9–11 μm (\( {\bar{\text{x}}} \) = 83 × 9.5 μm, n = 10), 8-spored, bitunicate, fissitunicate, clavate, long pedicellate, apically rounded, with an ocular chamber. Ascospores 10.5–14.5 × 3.5–5 μm (\( {\bar{\text{x}}} \) = 12.5 × 4 μm, n = 20), uni- to tri-seriate, clavate to fusiform, with rounded ends, 1-septate, constricted at the septum, asymmetrical, upper cell shorter and wider than lower cell, hyaline, straight or curved, smooth-walled. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 10 mm in 15 days at 25 °C, white to pale brown from above, black from below, surface rough, with dense mycelium, dry, raised, edge entire.
Material examined: CHINA, Yunnan Province, Dehong, on submerged wood in a stream, 25 November 2017, G.N. Wang, H158C-1 (MFLU 18-1185), living culture MFLUCC 18-1026; ibid., H158C-2 (HKAS 101720), living culture KUMCC 18-0070.
Notes: Our new collection MFLUCC 18-1026 clusters with Seriascoma didymosporum with high bootstrap support (Fig. 89). MFLUCC 18-1026 is identified as S. didymosporum based on sequence data which has one, four (includes two gaps) and three nucleotide differences in LSU, ITS and TEF sequence data, respectively, between MFLUCC 18-1026 and MFLUCC 11-0179 (ex-holotype). We only found uniloculate ascomata in our collection, while the holotype MFLU 11–0215 has multi-loculate ascomata (Dai et al. 2017). Our collection MFLUCC 18-1026 has longer asci (70–95 × 9–11 μm vs. (56–)60–75(−80) × 8–11(−13) μm) than the holotype (Dai et al. 2017). This is a new habitat and geographical record for S. didymosporum from freshwater in China.
Parabambusicolaceae Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 115 (2015)
Aquastroma Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 115 (2015)
Saprobic on submerged twigs of woody plant. Sexual morph: Ascomata scattered to gregarious, immersed to erumpent, depressed globose. Ostiolar neck central, compressed, with a wide ostiole. Peridium composed of pale brown, thin-walled cells. Pseudoparaphyses septate, branched and anastomosed. Asci 8-spored, bitunicate, fissitunicate, clavate, pedicellate. Ascospores clavate to fusiform, slightly curved, multiseptate, slightly constricted at septa, hyaline, smooth, with an entire sheath (Tanaka et al. 2015). Asexual morph: Undetermined.
Type species: Aquastroma magniostiolatum Kaz. Tanaka & K. Hiray.
Notes: The monotypic genus Aquastroma was introduced for a freshwater species A. magniostiolatum collected from Japan (Tanaka et al. 2015). Aquastroma fits well with the familial concept of Parabambusicolaceae and differs from other genera by its ascomata with a compressed neck and wide ostiole, and clavate to fusiform, multiseptate ascospores with an entire sheath (Tanaka et al. 2015). Aquastroma clustered within Parabambusicolaceae with high bootstrap support (Tanaka et al. 2015; Phookamsak et al. 2019). We recollected the type species A. magniostiolatum from submerged wood in Thailand.
List of freshwater Aquastroma species
*Aquastroma magniostiolata Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 115 (2015)
Facesoffungi number: FoF09273; Fig. 90
Freshwater distribution: Japan (Tanaka et al. 2015), Thailand (this study)
Saprobic on submerged wood in freshwater. Sexual morph: Ascomata 190–230 μm high, 200–240 μm diam., scattered to gregarious, immersed to erumpent, subglobose, black, coriaceous, with wide ostiole. Peridium 15–20 μm thick at sides, composed of several layers of polygonal, thin-walled, pale brown cells, poorly developed at the base, 5–10 μm thick. Pseudoparaphyses 1.5–2 μm wide, numerous, cellular, hypha-like, hyaline, septate, branching and anastomosing. Asci 100–125 × 19–22 μm (\( {\bar{\text{x}}} \) = 107 × 21 μm, n = 10), 8-spored, bitunicate, fissitunicate, clavate, sessile or short pedicellate. Ascospores 32–39 × 8–11 μm (\( {\bar{\text{x}}} \) = 36 × 9.5 μm, n = 20), bi- to tri-seriate, clavate to fusiform, mostly curved, 5–8-septate, constricted at the septa, hyaline, become brown in old specimen, smooth, with an entire sheath, 5–9 μm wide. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 50 mm in 60 days at 25 °C, grey to black from above, black from below, surface rough, dry, raised, with dense mycelium, edge entire.
Material examined: THAILAND, Chiang Mai Province, on submerged wood in a stream, 9 February 2018, X.D. Yu, Y2-1 (MFLU 18-0988), living culture MFLUCC 18-0976; ibid., Y2-2 (HKAS 105097).
Notes: Our collection MFLUCC 18-0976 is identified as Aquastroma magniostiolata based on phylogenetic analysis (Fig. 2). MFLUCC 18-0976 has identical morphological characters with the holotype of A. magniostiolata, except for slightly thinner asci (100–125 × 19–22 μm vs. 112.5–137.5 × 25–29.5 μm) (Tanaka et al. 2015). This is a new geographical record for A. magniostiolatum in Thailand.
Parabambusicola Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 115 (2015)
Saprobic on dead stems or submerged wood. Sexual morph: Ascomata scattered or clustered in group, immersed to erumpent, hemispherical with flattened base, ostiolate, with short, central papilla. Peridium composed of pale brown, flattened cells at the sides and parallel rows of rectangular to polygonal cells at the rim. Pseudoparaphyses numerous, cellular, hypha-like, hyaline, septate. Asci 8-spored, bitunicate, broadly cylindrical to clavate, short pedicellate. Ascospores triseriate, fusiform, multiseptate, hyaline, smooth, with an entire sheath (Tanaka et al. 2015). Asexual morph: Undetermined.
Type species: Parabambusicola bambusina (Teng) Kaz. Tanaka & K. Hiray.
Notes: Parabambusicola was established to accommodate a known species Massarina bambusina Teng (Teng 1934; Tanaka and Harada 2003c). Both P. bambusina and P. thysanolaenae Goonas. et al. were isolated from dead stems in terrestrial habitats (Teng 1934; Tanaka and Harada 2003c), while our new species P. aquatica was found on submerged wood in freshwater habitats.
List of freshwater Parabambusicola species
*Parabambusicola aquatica W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557931; Facesoffungi number: FoF09274; Fig. 91
Etymology: referring to aquatic habitat of this fungus
Holotype: MFLU 18-1524
Saprobic on submerged wood in freshwater. Sexual morph: Ascomata 150–180 μm high, 350–400 μm wide, scattered, immersed, with black spot on host surface, flat cone, brown, coriaceous. Peridium 10–25 μm thick at the sides, comprising several layers of brown, thin-walled, large cells of textura angularis, flattened and poorly developed at the base, 10–15 μm thick. Pseudoparaphyses 1.5–2 μm diam., numerous, cellular, hypha-like, hyaline, indistinctly septate, embedded in a gelatinous matrix. Asci 110–175 × 30–37 μm (\( {\bar{\text{x}}} \) = 147 × 34 μm, n = 10), 8-spored, bitunicate, broadly clavate or narrowly ellipsoidal, apically rounded with well-developed ocular chamber. Ascospores 55–60(–67) × 12–17 μm (\( {\bar{\text{x}}} \) = 56 × 14 μm, n = 10), overlapping bi- to tri-seriate, straight or slightly curved, hyaline, 5-septate, clearly shown when old, constricted at the septa, fusiform with rounded ends, with minute guttules, thin-walled, smooth, with a globose mucilaginous sheath, 30–50 μm wide. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 10 mm in 5 days at 25 °C, grey to dark grey from above, brown from below, surface rough, dry, raised, edge entire.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, 20180503-1 (MFLU 18-1524, holotype), ex-type living culture MFLUCC 18-1140; ibid., 20180503-2 (HKAS 104993, isotype), ex-type living culture KUMCC 19-0010.
Notes: Parabambusicola aquatica is similar to P. bambusina and P. thysanolaenae in the characters of peridium, asci and ascospores (Tanaka and Harada 2003c; Phookamsak et al. 2019). However, P. aquatica has wider asci (110–175 × 30–37 μm vs. 86–150 × 22–30 μm) and ascospores (55–60(–67) × 12–17 μm vs. 42–64.5 × 7–10 μm) than P. bambusina (Tanaka and Harada 2003c). Parabambusicola aquatica also has larger ascospores than P. thysanolaenae (55–60(–67) × 12–17 μm vs. 45–55 μm × 7.5–11 μm). They are well separated in our phylogenetic tree (Fig. 2).
Paramonodictys N.G. Liu, K.D. Hyde & J.K. Liu, Fungal Diversity 100: 90 (2020)
Saprobic on decaying wood in freshwater or terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Hyphomycetous. Colonies on natural substrate superficial, scattered, black. Mycelium partly immersed, partly superficial. Stroma present, erumpent, erect, subcylindrical or truncated-cone-form, pale brown to olivaceous brown. Conidiophores absent. Conidiogenous cells holoblastic, monoblastic. Conidia dictyosporous, muriform, globose or subglobose, broadly rounded at the apex, olivaceous brown to dark brown, solitary, smooth-walled (Hyde et al. 2020b).
Type species: Paramonodictys solitarius N.G. Liu, K.D. Hyde & J.K. Liu
Notes: Paramonodictys was introduced to accommodate a monodictys-like species collected on decaying wood in China (Hyde et al. 2020b). Monodictys S. Hughes is polyphyletic (Mouzouras and Jones 1985; Han et al. 2014; Tanaka et al. 2015) and typified by M. putredinis (Wallr.) S. Hughes. Due to the dearth of sequences of M. putredinis, Monodictys sensu stricto could not be clarified. Based on the presence of stroma, Paramonodictys was established (Hyde et al. 2020b).
List of freshwater Paramonodictys species
*Paramonodictys solitarius N.G. Liu, K.D. Hyde & J.K. Liu, Fungal Diversity 100: 91 (2020); Fig. 92
Freshwater distribution: Thailand (this study)
Saprobic on submerged wood in freshwater. Sexual morph: Undetermined. Asexual morph: Colonies superficial, scattered, black. Mycelium mostly superficial, composed of branched, brown, septate, rough hyphae. Stroma not observed. Conidiophores absent. Conidiogenous cells holoblastic, monoblastic. Conidia 30–55 × 25–50 μm (\( {\bar{\text{x}}} \) = 40 × 37 μm, n = 15), solitary, acrogenous, simple, dry, globose or subglobose, ellipsoidal, muriform, multiseptate, dark brown to black, easily breaking when in water, smooth, thin-walled.
Culture characteristics: On PDA, colony circular, reaching 15 mm in 20 days at 25 °C, grey from above, black from below, surface rough, with dense mycelium, dry, raised, edge entire.
Material examined: THAILAND, Nan Province, on submerged wood in a stream, 4 August 2017, S. Boonmee, DP10 (MFLU 17-1714), living culture MFLUCC 17-2353.
Notes: Our new collection MFLUCC 17-2353 has identical LSU sequence data with the ex-type strain of Paramonodictys solitarius, with two and one nucleotide differences in ITS and TEF sequence data, respectively. Phylogenetic analysis also supports our collection as P. solitarius (Fig. 2). Our collection has smaller conidia (30–55 × 25–50 μm vs. 50–87 × 40–61 μm) than the holotype (Hyde et al. 2020b), and lacks a stroma. This is a new habitat and geographical record for P. solitarius from freshwater in Thailand.
Periconiaceae Nann., Repert. mic. uomo: 482 (1934)
Periconia Tode, Fung. mecklenb. sel. (Lüneburg) 2: 2 (1791)
Saprobic on decaying wood from terrestrial, freshwater, mangrove and marine habitats. Sexual morph: Ascomata scattered to gregarious, immersed to erumpent, globose, with ostiolate papilla. Ostiolar neck central, periphysate. Peridium composed of several layers of pale brown to brown, thin-walled cells. Pseudoparaphyses numerous, cellular, hyaline, septate, branched, anastomosing. Asci bitunicate, fissitunicate, 8-spored, oblong to cylindrical. Ascospores broadly fusiform, 1-septate, hyaline, smooth, with an entire sheath (Tanaka et al. 2015). Asexual morph: Hyphomycetous. periconia- or noosia-like. Conidiophores macronematous, mononematous, sometimes absent, branched. Branches pale brown to brown, smooth to slightly echinulate. Conidial heads spherical. Conidiogenous cells mono- to poly-blastic, discrete on stipe and branches. Conidia variable in shape, globose to ellipsoidal, aseptate, solitary or catenate, brown, verruculose to echinulate (Tanaka et al. 2015; Hyde et al. 2017).
Type species: Periconia lichenoides Tode
Notes: Periconia is characterized by mostly macronematous conidiophores which often have a spherical head, monoblastic or polyblastic conidiogenous cells, and catenate, aseptate, verruculose or echinulate conidia (Tode 1791; Cai et al. 2006a). After re-examination of six collections of P. byssoides Pers., it was deemed conspecific with P. lichenoides, but without molecular evidence (Mason and Ellis 1953). Periconia species are widely distributed and have been reported as endophytes, plant pathogenic (Odvody et al. 1977; Romero et al. 2001) and saprobic fungi from terrestrial (Liu et al. 2017b; Jayasiri et al. 2019), mangrove (Alias and Jones 2000), marine (Kohlmeyer 1977) and freshwater habitats (Luo et al. 2004; Hyde et al. 2017).
Two species have been linked to sexual morphs based on cultural and phylogenetic methods, viz. Periconia igniaria E.W. Mason & M.B. Ellis (Massarina in Dothideomycetes) (Booth 1968; Aptroot 1998) and P. prolifica Anastasiou (Okeanomyces in Sordariomycetes) (Kohlmeyer 1969; Pang et al. 2004). Periconia is, therefore, recognized as a polyphyletic genus (Tanaka et al. 2015; Liu et al. 2017b). The phylogenetic analysis of Phookamsak et al. (2019) showed that some genera, viz. Bambusistroma D.Q. Dai & K.D. Hyde, Flavomyces D.G. Knapp et al. and Noosia Crous et al., nested within Periconia in Periconiaceae, which also indicated the polyphyletic nature of Periconia. The sequences of the type species P. lichenoides are unavailable, but Periconia is placed in Dothideomycetes based on some species, e.g. P. aquatica Z.L. Luo et al., P. byssoides Pers. and P. submersa Z.L. Luo et al, which have the typical characters of Periconia (Tanaka et al. 2015; Hyde et al. 2017).
Tanaka et al. (2015) introduced a freshwater sexual species P. pseudodigitata Kaz. Tanaka & K. Hiray., which formed a sister clade to P. digitata (Cooke) Sacc. The freshwater species P. prolifica was suggested to be excluded from Periconia based on the distinct molecular characters and basipetal production of conidial chains, contrasting with the acropetal conidial chains of Periconia sensu stricto (Markovskaja and Kacergius 2014; Tanaka et al. 2015). We exclude this species in the key below.
List of freshwater Periconia species
*Periconia aquatica Z.L. Luo, H.Y. Su & K.D. Hyde, Fungal Diversity 87: 71 (2017); Fig. 93b, f–i
Freshwater distribution: China (Hyde et al. 2017)
*Periconia byssoides Pers., Syn. meth. fung. (Göttingen) 1: 18 (1801)
Synonymy: Sporocybe byssoides (Pers.) Fr., Syst. mycol. (Lundae) 3: 343 (1832)
Periconia pycnospora Fresen., Beitr. Mykol. 1: 20 (1850)
Periconia pycnospora f. citri Penz., Michelia 2: 469 (1882)
Cephalotrichum byssoides (Pers.) Kuntze, Revis. gen. pl. (Leipzig) 3: 453 (1898)
Periconia pycnospora f. israelitica Rayss & Borut, Mycopath. Mycol. appl. 10: 167 (1958)
Freshwater distribution: USA (Shearer 1972), China (Luo et al. 2004)
*Periconia digitata (Cooke) Sacc., Syll. fung. (Abellini) 4: 274 (1886)
Basionym: Sporocybe digitata Cooke, Grevillea 12: 33 (1883)
Freshwater distribution: China (Luo et al. 2004)
*Periconia minutissima Corda, Icon. fung. (Prague) 1: 19 (1837)
Freshwater distribution: China (Cai et al. 2002a; Luo et al. 2004; Hyde et al. 2017)
*Periconia pseudodigitata Kaz. Tanaka & K. Hiray., Stud. Mycol. 82: 119 (2015)
Freshwater distribution: Japan (Tanaka et al. 2015)
*Periconia submersa Z.L. Luo, H.Y. Su & K.D. Hyde, Fungal Diversity 87: 73 (2017); Fig. 93a, c–e, j, k
Freshwater distribution: China (Hyde et al. 2017)
Key to freshwater Periconia species
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1.
Conidiophores branched………2
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1.
Conidiophores unbranched………4
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2.
Conidia solitary………P. digitata
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2.
Conidia catenate………3
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3.
Conidia 7–9.5 μm diam.………P. pseudodigitata
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3.
Conidia 4.5–5.5 μm diam.………P. minutissima
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4.
Conidia spherical………P. byssoides
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4.
Conidia non-spherical………5
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5.
Conidia 10–12 × 6–7 μm………P. aquatica
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5.
Conidia 6.5–9.5 × 4.5–5.5 μm………P. submersa
Phaeoseptaceae S. Boonmee, Thambugala & K.D. Hyde, Mycosphere 9(2): 323 (2018)
Key to freshwater genera of Phaeoseptaceae
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1.
Sexual morph………Phaeoseptum
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1.
Asexual morph………Pleopunctum
Phaeoseptum Ying Zhang, J. Fourn. & K.D. Hyde, Mycologia 105(3): 606 (2013)
Saprobic on submerged branch or dead stems. Sexual morph: Ascomata solitary, scattered to gregarious, sometimes immersed under pseudoclypeus, erumpent when mature, appearing as black, elongate regions on host surface, depressed globose, sometimes covered with some brown hyphae, dark brown, with ostiolate papilla. Peridium pseudoparenchymatous, comprising several layers of somewhat flattened cells of textura angularis. Pseudoparaphyses numerous, cellular, narrow, hyaline, cylindrical, septate, anastomosing. Asci 8-spored, bitunicate, cylindrical-clavate, pedicellate, with a small ocular chamber and apical ring. Ascospores uni- to tri-seriate, fusiform, slightly curved, transversally septate, with a vertical septum in nearly all cells, sometimes with a Y-shaped septum in the end cell, pale brown to brown, with thickened and darkened septa at maturity, smooth- or rough-walled, without sheath or appendages (Zhang et al. 2013b). Asexual morph: Undetermined.
Type species: Phaeoseptum aquaticum Ying Zhang, J. Fourn. & K.D. Hyde
Notes: Phaeoseptum was introduced by Zhang et al. (2013b) to accommodate the freshwater species P. aquaticum collected from France. Phaeoseptum was placed in Halotthiaceae based on LSU sequence data (Zhang et al. 2013b). With more sequence data added, Phaeoseptum was transferred to Phaeoseptaceae (Hyde et al. 2018a). The type species P. aquaticum is characterized by ascomata fully immersed under a small blackened pseudoclypeus, cylindrical-clavate asci with a small ocular chamber and an apical ring, and fusiform ascospores with transverse and longitudinal septa, exceptionally with a Y-shaped septum in the end cell (Zhang et al. 2013b).
List of freshwater Phaeoseptum species
*Phaeoseptum aquaticum Ying Zhang, J. Fourn. & K.D. Hyde, Mycologia 105(3): 606 (2013); Fig. 94
Freshwater distribution: France (Zhang et al. 2013b)
Pleopunctum N.G. Liu, K.D. Hyde & J.K. Liu, Mycosphere 10 (1): 767 (2019)
Saprobic on decaying wood in terrestrial or submerged wood in freshwater habitats. Sexual morph: Undetermined. Asexual morph: Hyphomycetous. Colonies clustered in several small groups or gregarious, sporodochial, punctiform, brown to black, shining. Mycelium immersed in the substratum, composed of septate, branched, subhyaline to greyish brown hyphae. Conidiophores macronematous, mononematous, cylindrical, branched or unbranched, septate, medium brown, smooth-walled, thick-walled. Conidiogenous cells holoblastic, monoblastic, cylindrical, brown. Conidia acrogenous, solitary, muriform, constricted at septa, broadly oval to ellipsoidal, variable in shape, smooth-walled, pale brown to dark brown, often with a hyaline, ellipsoidal to globose basal cell (Liu et al. 2019).
Type species: Pleopunctum ellipsoideum N.G. Liu, K.D. Hyde & J.K. Liu
Notes: Pleopunctum was introduced to accommodate two terrestrial species, P. ellipsoideum N.G. Liu et al. and P. pseudoellipsoideum N.G. Liu et al., collected from decaying wood in China (Liu et al. 2019). Pleopunctum is characterized by muriform, oval to ellipsoidal conidia often with a hyaline, elliptical to globose basal cell (Liu et al. 2019). Pleopunctum, the only hyphomycetous genus, formed a well-supported and distinct clade in Phaeoseptaceae (Liu et al. 2019). We collected P. pseudoellipsoideum from submerged wood in China.
List of freshwater Pleopunctum species
*Pleopunctum pseudoellipsoideum N.G. Liu, K.D. Hyde & J.K. Liu, Mycosphere 10 (1): 768 (2019); Fig. 95
Freshwater distribution: China (this study)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies clustered in several small groups, sporodochial, punctiform, black, shining. Mycelium partly immersed in natural substratum, composed of hyaline to pale brown, septate hyphae. Conidiophores reduced to conidiogenous cells. Conidiogenous cells up to 19.5 µm long, 3.5 µm wide, holoblastic, monoblastic, integrated, determinate, cylindrical, easily broken off, pale brown to brown, smooth-walled, thick-walled. Conidia 35.5–66 × 26.5–40 µm (subtending cells included) (\( {\bar{\text{x}}} \) = 51.5 × 30 µm, n = 15), solitary, dry, ellipsoidal, subglobose, subcylindrical or obovoid, rounded at the apex, multi-septate, muriform, slightly constricted at the septa, brown to black, paler to hyaline at the base; basal cells (subtending cells) subhyaline to hyaline, cuneiform, always swollen to globose, up to 15 µm diam., straight, smooth, thin-walled.
Material examined: CHINA, Yunnan Province, Qujing, on submerged wood in a stream, 10 May 2017, C.X. Liu, L43 (HKAS 102147).
Notes: HKAS 102147 clusters with Pleopunctum pseudoellipsoideum with high bootstrap support (Fig. 2). HKAS 102147 has identical LSU and ITS sequence data with the ex-type strain of P. pseudoellipsoideum (MFLUCC 19-0391) and seven nucleotide differences in TEF sequence data, which indicate they are conspecific. Our collection has wider conidia than the holotype (35.5–66 × 26.5–40 µm vs. 39–59 × 19–28 μm) (Liu et al. 2019). This is a new habitat record for P. pseudoellipsoideum from freshwater. We directly sequenced from conidia because the culture was contaminated.
Pleomassariaceae M.E. Barr, Mycologia 71(5): 949 (1979)
Splanchnonema Corda, 3 Abt. (Pilze Deutschl.) 2: 115 (1829)
Saprobic on wood or lichens in terrestrial or submerged wood in freshwater habitats. Sexual morph: Ascomata medium to large, solitary or scattered, immersed in a pseudostroma or superficial, uniloculate, globose to flattened subglobose, lobate to generally reniform, dark brown to black, with a small ostiole appearing on the host surface, sometimes carbonized at the whole upper. Peridium thin. Pseudoparaphyses dense, cellular, hyaline, septate, anastomosing and branching, embedded in a matrix. Asci 8-spored, bitunicate, fissitunicate, clavate to broadly cylindrical, short pedicellate. Ascospores uni- to bi-seriate, clavate with a rounded apex and acute base, or obovoid, reddish brown, septate, constricted at the septa, usually asymmetrical, thin-walled, with or without sheath (Zhang et al. 2012b; Aptroot and Moon 2014). Asexual morph: Myxocyclus Riess, Stegonsporium Corda (Barr 1982; Sivanesan 1984), Macrodiplodiopsis Petr. (Glawe 1985) and Helminthosporium Link (Subramanian and Sekar 1987).
Type species: Splanchnonema pustulatum Corda
Notes: Splanchnonema, an old genus, comprises over 40 epithets in Index Fungorum (2020). Pleomassaria was treated as a synonym of Splanchnonema (Barr 1993), but not accepted by some authors (Zhang et al. 2012b). Pleomassaria was suppressed and replaced by Prosthemium Kunze (Wijayawardene et al. 2014) based on the phylogenetic results where the type species of both genera (P. siparia (Berk. & Broome) Sacc. and P. betulinum Kunze) grouped together in a monophyletic clade (Tanaka et al. 2010). Splanchnonema was accepted as a member of Pleomassariaceae based on phylogeny (Hyde et al. 2013; Liu et al. 2015) and followed by Wijayawardene et al. (2018, 2020). The asexual morphs of this genus are generally coelomycetous although some are hyphomycetous (Subramanian and Sekar 1987), but not shown by molecular data.
The freshwater species Splanchnonema britzelmayrianum (Rehm) Boise is characterized by spherical ascomata with a short papilla, cylindric-clavate asci, and obovoid, brown, 7–8-septate, minutely punctate ascospores (Boise 1985). The phylogenetic placement of S. britzelmayrianum in Splanchnonema needs to be confirmed with molecular data.
List of freshwater Splanchnonema species
Splanchnonema britzelmayrianum (Rehm) Boise [as ‘britzelmayriana’], Mycotaxon 22(2): 480 (1985)
Basionym: Melanomma megalosporum var. britzelmayrianum Rehm, Hedwigia 20(3): 51 (1881)
Synonymy: Melanomma britzelmayrianum (Rehm) Sacc., Syll. fung. (Abellini) 2: 120 (1883)
Trematosphaeria britzelmayriana (Rehm) Sacc., Syll. fung. (Abellini) 2: 120 (1883)
Freshwater distribution: Hungary (Révay and Gönczöl 1990)
Pleomonodictydaceae Hern.-Restr., J. Mena & Gené, Stud. Mycol. 86: 76 (2017)
Pleomonodictys Hern.-Restr., J. Mena & Gené, Stud. Mycol. 86: 77 (2017)
Saprobic on submerged wood or dead bark in freshwater or terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Colonies effuse, black. Mycelium partly immersed or partly superficial, composed of branched, septate, nodulose, smooth or verruculose hyphae. Conidiophores micronematous or semi-macronematous, often reduced to conidiogenous cells, terminal or intercalary. Conidiogenous cells blastic. Conidia muriform, variable in shape, dark brown to black, solitary or in short chains, verrucose or tuberculate (Hernández-Restrepo et al. 2017).
Type species: Pleomonodictys descalsii Hern.-Restr. et al.
Notes: Pleomonodictys was introduced to accommodate two monodictys-like species which differ from Monodictys S. Hughes by verrucose to tuberculate conidia and/or hyphae (Cai et al. 2006a; Hernández-Restrepo et al. 2017). The type species of Monodictys, M. putredinis (Wallr.) S. Hughes, lacks sequence data and was reported as the asexual morph of Ohleria brasiliensis Starbäck based on culture methods (Samuels 1980); molecular data are needed to clarify the placement of Monodictys. Pleomonodictys capensis (R.C. Sinclair, Boshoff & Eicker) Hern.-Restr. et al. was found from freshwater habitats, but not confirmed by molecular data (Ho et al. 2001).
List of freshwater Pleomonodictys species
*Pleomonodictys capensis (R.C. Sinclair, Boshoff & Eicker) Hern.-Restr., J. Mena & Gené, Stud. Mycol. 86: 77 (2017)
Basionym: Monodictys capensis R.C. Sinclair, Boshoff & Eicker, Mycotaxon 59: 359 (1996)
Freshwater distribution: Brunei (Ho et al. 2001)
Pseudoastrosphaeriellaceae Phook. & K.D. Hyde, Fungal Diversity 74: 181 (2015)
Pseudoastrosphaeriella Phook., Z.L. Luo & K.D. Hyde, Fungal Diversity 74: 182 (2015)
Saprobic on bamboo and palms in freshwater or terrestrial habitats. Sexual morph: Ascostromata dark brown, scattered to gregarious, immersed to erumpent, slightly conical to lenticular or hemisphaerical, with flattened base, uni- to bi-loculate, glabrous, coriaceous, with ostiolate papilla. Ostioles central, cylindrical, brittle, carbonaceous, with short or long neck. Peridium thick-walled, unequal in thickness, composed of pseudoparenchymatous cells, outer layers mostly comprising host cells and fungal tissue, poorly developed at the base. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, branching and anastomosing, embedded in a hyaline gelatinous matrix. Asci 8-spored, bitunicate, clavate to cylindric-clavate, pedicellate, with ocular chamber. Ascospores overlapping uni- to tri-seriate, brown to reddish brown, fusiform to clavate, septate, rough-walled or smooth-walled, with or without striations, or with longitudinal ridges, with or without a mucilaginous sheath (Phookamsak et al. 2015b). Asexual morph: Coelomycetous. Conidiomata pycnidial, immersed, solitary to scattered, conical or hemisphaerical to globose, ostiolate. Peridium thick-walled, unequal in thickness, composed of dark, pseudoparenchymatous cells. Conidiophores reduced to conidiogenous cells. Conidiogenous cells phialidic, discrete, cylindrical or cylindric-clavate or ampulliform, septate, hyaline, smooth-walled. Conidia globose to subglobose, or oblong, aseptate, hyaline, smooth-walled (Phookamsak et al. 2015b).
Type species: Pseudoastrosphaeriella thailandensis Phook., Z.L. Luo & K.D. Hyde
Notes: Pseudoastrosphaeriella was introduced to accommodate astrosphaeriella-like species (Phookamsak et al. 2015b). Pseudoastrosphaeriella is distinguished from Astrosphaeriella Syd. & P. Syd. by its immersed ascostromata beneath the host epidermis, with short or long necks, and the peridium comprising host cells and fungal tissue. In contrast, Astrosphaeriella has erumpent ascostromata through the host epidermis, with a star-like or rounded flange and small papilla, and the peridium comprising an opaque, black, amorphous, brittle layer (Liu et al. 2011; Phookamsak et al. 2015b). Seven species are accepted in Pseudoastrosphaeriella, five of which are from freshwater habitats. All freshwater Pseudoastrosphaeriella species (see list below), have rough-walled ascospores with minute striations or longitudinal ridges (Phookamsak et al. 2015b), except our new species P. aquatica which has smooth-walled ascospores.
List of freshwater Pseudoastrosphaeriella species
*Pseudoastrosphaeriella africana (D. Hawksw.) Phook. & K.D. Hyde, Fungal Diversity 74: 183 (2015)
Basionym: Astrosphaeriella africana D. Hawksw., Sydowia 38: 116 (1986) [1985]
Freshwater distribution: Thailand (Phookamsak et al. 2015b)
*Pseudoastrosphaeriella aquatica W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557932; Facesoffungi number: FoF09275; Fig. 96
Etymology: referring to aquatic habitat of this fungus
Holotype: MFLU 18-0996
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascostromata 250–350 μm high, 280–320 μm diam., black, scattered or gregarious, immersed with neck erumpent through host tissue, becoming raised, subglobose, coriaceous, ostiolate. Neck 450–500 μm high, 100–110 μm diam., black, central, cylindrical, oblique, brittle, thick-walled, comprising some layers of blackened cells, carbonaceous. Peridium 15–25 μm thick, of unequal thickness, composed of thin-walled, hyaline to brown, compressed cells of textura angularis or textura prismatica, outer layers comprising host cells and fungal tissue. Pseudoparaphyses 1 μm diam., numerous, trabeculate, filiform, hyaline, branching and anastomosing, embedded in a gelatinous matrix. Asci 145–260 × 19–25 μm (\( {\bar{\text{x}}} \) = 213 × 22 μm, n = 15), 8-spored, bitunicate, distinctly clavate, or cylindrical, with elongate pedicel, up to 115 μm long, with indistinct ocular chamber. Ascospores 40–48 × 8–10.5 μm (\( {\bar{\text{x}}} \) = 44.5 × 9.5 μm, n = 30), overlapping uni-seriate or uni-seriate at the base and bi- to tri-seriate near the apex, fusiform, with acute or rounded ends, brown, 3-septate, constricted at the septa, swollen above central septum, guttulate, thin-walled, smooth. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 20 mm in 45 days at 25 °C, grey from above, black from below, surface rough, with dense mycelium, dry, edge entire.
Material examined: THAILAND, Chiang Mai Province, on submerged wood in a stream, 9 February 2018, X.D. Yu, Y18 (MFLU 18-0996, holotype), ex-type living culture MFLUCC 18-0984; Phayao Province, on submerged wood, 23 February 2018, X.D. Yu, Y27 (MFLU 18-1005), living culture MFLUCC 18-0991; Chiang Rai Province, on submerged wood, 10 April 2018, X.D. Yu, Y41 (MFLU 18-1016), living culture KUMCC 19-0096.
Notes: Pseudoastrosphaeriella aquatica is similar to P. papillata in having black ascomata with long necks and similar in shape and overlapping size of ascospores, but the smooth-walled, 3-septate ascospores of the former differs from the rough-walled, mostly 1-septate ascospores with small, pad-like appendages of the latter (Hyde and Frohlich 1998; Phookamsak et al. 2015b). Phylogenetic analysis supports our collections to be a new species (Fig. 2).
*Pseudoastrosphaeriella bambusae Phook. & K.D. Hyde, Fungal Diversity 74: 186 (2015); Figs. 97, 98
Freshwater distribution: Thailand (Phookamsak et al. 2015b; this study)
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascostromata 200–300 µm high, 200–400 µm diam., black, scattered to gregarious, immersed with neck erumpent through host tissue, becoming raised, hemispherical to conical, with flattened base and long neck, unilocular, coriaceous, ostiolate. Peridium 10–30 µm thick, composed of dark, thick-walled, angular, pseudoparenchymatous, occluded cells. Pseudoparaphyses 1.5 μm diam., numerous, trabeculate, filiform, hyaline, anastomosing at the apex, embedded in a gelatinous matrix. Asci 120–240 × 12–17 μm (\( {\bar{\text{x}}} \) = 188 × 14 μm, n = 10), including elongate pedicel, 8-spored, bitunicate, cylindric-clavate to clavate, with furcate or foot-like pedicel, become elongate when in water, with an ocular chamber. Ascospores 31–50 × 5.5–8.2 μm (\( {\bar{\text{x}}} \) = 41 × 7.2 μm, n = 20), biseriate, fusiform, with acute or rounded ends, slightly reddish brown, 1(–3)-septate, constricted at the central septum, slightly swollen above central septum, guttulate, thin-walled, smoothor rough, with a mucilaginous sheath; sheath elongate at both ends and wing-like at the middle. Asexual morph: Undetermined.
Material examined: THAILAND, Chiang Rai Province, on submerged wood in a stream, 1 July 2018, W. Dong, CR131 (MFLU 18-1698), living cultue KUMCC 19-0091; ibid., CR133 (MFLU 18-1704), living cultue KUMCC 19-0093; ibid., CR142 (MFLU 18-1699), living cultue KUMCC 19-0095; ibid., 18 January 2010, H. Zhang, a4 (MFLU 10-0160), living cultue MFLUCC 10-0885.
Notes: Our collections are identified as Pseudoastrosphaeriella bambusae based on the identical LSU and TEF sequence data with the ex-type strain MFLUCC 11-0205, and phylogenetic analysis (Fig. 2). Phookamsak et al. (2015b) described P. bambusae as having rough-walled ascospores with minute striations surrounded by mucilaginous sheath. However, the minute striations are not found in our three collections (KUMCC 19-0091, KUMCC 19-0093, KUMCC 19-0095), but obvious in MFLUCC 10-0885 (Fig. 98). The ascospore sheaths in our four collections are distinctly elongate at both ends and wing-like at the middle (Figs. 97, 98), a feature not fully described in the holotype (Phookamsak et al. 2015b).
*Pseudoastrosphaeriella longicolla Phook. & K.D. Hyde, Fungal Diversity 74: 186 (2015)
Freshwater distribution: Thailand (Phookamsak et al. 2015b)
Pseudoastrosphaeriella papillata (K.D. Hyde & J. Fröhl.) Phook. & K.D. Hyde, Fungal Diversity 74: 188 (2015)
Basionym: Astrosphaeriella papillata K.D. Hyde & J. Fröhl., Sydowia 50(1): 109 (1998)
Freshwater distribution: Brunei (Hyde and Frohlich 1998), Philippines (Cai et al. 2003a), Yunnan, China (Luo et al. 2004)
Key to freshwater Pseudoastrosphaeriella species
-
1.
Ascospores smooth-walled………P. aquatica
-
1.
Ascospores rough-walled………2
-
2.
Ascospores with mucilaginous sheaths or appendages………3
-
2.
Ascospores without mucilaginous sheaths………4
-
3.
Ascospores surrounded by irregular sheaths………P. bambusae
-
3.
Ascospores with small, pad-like, mucilaginous appendages at both ends………P. papillata
-
4.
Ascospores (39–)40–48(–50) × 5–7 μm………P. africana
-
4.
Ascospores (48–)50–60(–63.5) × 5.5–7(–7.5) μm………P. longicolla
Roussoellaceae J.K. Liu, Phook., D.Q. Dai & K.D. Hyde, Phytotaxa 181(1): 7 (2014)
Roussoella Sacc., Atti dell’Istituto Veneto Scienze, 6: 410, 1888.
Saprobic on various flowering plants in terrestrial or submerged wood in freshwater habitats, mainly on bamboo and palms. Sexual morph: Ascostromata solitary to gregarious, visible as black, raised, elongate to hemisphaerical or dome-shaped ascostroma, uni- to multi-loculate, glabrous, coriaceous. Locules clustered, immersed under a clypeus, subglobose to lenticular or quadrilateral dome-shaped, central ostiolate, with a minute papilla. Peridium slightly thick at the side, composed of several layers of flattened, brown to dark brown pseudoparenchymatous cells, arranged in textura angularis to textura prismatica. Pseudoparaphyses dense, trabeculate, filamentous, hyaline, branching at the apex, anastomosing, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, cylindrical to cylindric-clavate, short pedicellate, with obtuse to knob-like pedicel, apically rounded with well-developed ocular chamber. Ascospores overlapping uniseriate, ellipsoidal to fusiform, pale brown to dark brown, 1-septate, ornamented, with or without a mucilaginous sheath (Liu et al. 2014). Asexual morph: Coelomycetous, reported as Cytoplea (Hyde et al. 1996a). Conidiomata pycnidial, scattered to clustered, solitary to gregarious, semi-immersed to superficial, globose to subglobose, dark brown to black, single- or multi-loculate, locules separated by dark, palisade-like cells. Pycnidial wall slightly thick at the base, composed of several layers of brown to dark brown, pseudoparenchymatous cells, arranged in textura angularis to textura prismatica. Conidiophores arising from the basal cavity, reduced to conidiogenous cells. Conidiogenous cells enteroblastic, phialidic, determinate, discrete, ampulliform, hyaline, smooth-walled. Conidia globose to subglobose, oblong or ellipsoidal, brown, aseptate or septate, smooth- or rough-walled.
Type species: Roussoella nitidula Sacc. & Paol.
Notes: Roussoella was introduced by Saccardo and Paoletti (1888) with R. nitidula as the type species. An epitype of R. nitidula was designated by Liu et al. (2014) who also found the Cytoplea asexual morph in culture. Roussoella accommodates species having large ascostromata with multi-loculate, bitunicate asci and brown, fusiform to ellipsoidal, ornamented, didymosporous ascospores which are mostly associated with bamboo and palms (Tanaka et al. 2009; Hyde et al. 2013; Liu et al. 2014; Dai et al. 2017; Jiang et al. 2019).
The freshwater species Roussoella minutella (Penz. & Sacc.) Aptroot was treated as a synonym of R. pustulans (Ellis & Everh.) Y.M. Ju et al. by Hyde (1997), but not shown in Index Fungorum (2020). We follow Cai et al. (2003a), using the name R. minutella. Roussoella minutella has shorter ascospores than another freshwater species R. intermedia (see key below). We introduce a new species R. aquatica collected from submerged wood in China.
List of freshwater Roussoella species
*Roussoella aquatica W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557933; Facesoffungi number: FoF09276; Fig. 99
Etymology: referring to aquatic habitat of this fungus
Holotype: MFLU 18-1169
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Stromata immersed under an epidermis, becoming raised at maturity, 1–2 locules. Locules 150–180 μm high, 210–240 μm diam., immersed in the stromata, conical or hemispherical, flattened at the base, dark brown to black, ostiolate. Peridium 10–30 μm thick, comprising 3–5 layers of brown, thick-walled cells of textura angularis. Conidiophores reduced to conidiogenous cells. Conidiogenous cells 3–4 × 1.5–2 μm, enteroblastic, annellidic, integrated, determinate, ampulliform, hyaline, smooth-walled. Conidia 2.7–3.5 × 2–2.5 μm (\( {\bar{\text{x}}} \) = 3.2 × 2.2 μm, n = 30), ellipsoidal, aseptate, straight, rounded at both ends, brown to greenish brown, smooth-walled.
Culture characteristics: On PDA, colony circular, reaching 15 mm in 25 days at 25 °C, white from above, yellowish brown from below, surface rough, felt, with dense mycelium, dry, edge entire.
Material examined: CHINA, Yunnan Province, Dehong, on submerged wood in a stream, 25 November 2017, G.N. Wang, H1A-1 (MFLU 18-1169, holotype), ex-type living culture MFLUCC 18-1040; ibid., H1A-2 (HKAS 101739, isotype), ex-type living culture KUMCC 18-0091.
Notes: Roussoella aquatica is similar to R. tuberculata D.Q. Dai & K.D. Hyde in having ellipsoidal, aseptate, brown conidia. However, the latter has small, roughened tubercules sparsely covering the conidia (Dai et al. 2017), while R. aquatica has smooth-walled conidia. Additionally, R. aquatica has smaller conidia than R. tuberculata (2.7–3.5 × 2–2.5 μm vs. 8.5–10 × 4.5–5.5 μm). The ellipsoidal, brown, aseptate conidia of R. aquatica are also similar to R. chiangraina Phook. et al, but the latter has obvious verrucose conidia (Liu et al. 2014; Wijayawardene et al. 2016), and molecular evidence shows them to be different species (Fig. 102).
*Roussoella intermedia Y.M. Ju, J.D. Rogers & Huhndorf, Mycotaxon 58: 447 (1996)
Freshwater distribution: North America (Fallah and Shearer 2001)
Roussoella minutella (Penz. & Sacc.) Aptroot, Nova Hedwigia 60(3–4): 367 (1995)
Basionym: Didymosphaeria minutella Penz. & Sacc., Malpighia 11(9-10): 396 (1897)
Freshwater distribution: Philippines (Cai et al. 2003a)
Key to freshwater Roussoella species
-
1.
Coelomycetous………R. aquatica
-
1.
Ascomycetous………2
-
2.
Ascospores 9.5–13 × 3.5–4.5 μm………R. minutella
-
2.
Ascospores 12–16 × 4–6 μm………R. intermedia
Neoroussoella J.K. Liu, Phook. & K.D. Hyde, Phytotaxa 181(1): 21 (2014)
Saprobic on decaying bamboo culms, submerged wood or parasitic on human diseased eyes. Sexual morph: Ascostromata immersed under a clypeus or epidermis, raised, visible as black dome-shaped or flattened ovoid areas on host surface, coriaceous, solitary to gregarious, black, central ostiolate. Peridium composed of several layers of light brown to brown, thin-walled cells of textura angularis, with flattened base. Pseudoparaphyses numerous, trabeculate, filiform, hyaline, anastomosing, branching at the apex, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, cylindrical, short to long pedicellate, apically rounded with an ocular chamber. Ascospores uniseriate, ellipsoidal to fusiform, 1-septate, constricted at the septum, pale brown to brown or yellowish brown, rough-walled (Liu et al. 2014). Asexual morph: Coelomycetous. Conidiomata immersed to superficial, solitary to gregarious, globose to subglobose or irregular shape, uni- to multi-loculate. Pycnidial wall composed of several layers of cells of textura angularis. Conidiophores arising from the basal cavity, unbranched, aseptate. Conidiogenous cells annellidic, ampulliform or lageniform or cylindrical or cylindric-clavate, hyaline. Conidia oblong to ellipsoidal, hyaline, aseptate, smooth-walled (Liu et al. 2014).
Type species: Neoroussoella bambusae Phook., J.K. Liu & K.D. Hyde
Notes: Neoroussoella was introduced to accommodate the holomorphic species N. bambusae Phook. et al. collected on dead branch in Thailand (Liu et al. 2014). The asexual morph of N. bambusae was produced on bamboo pieces on WA and characterized by annellidic conidiogenous cells and oblong to ellipsoidal, hyaline conidia (Liu et al. 2014). Neoroussoella species formed a well-supported and distinct clade in Roussoellaceae (Jayasiri et al. 2019; Karunarathna et al. 2019; Phookamsak et al. 2019). Neoroussoella was considered to be different from Roussoella by relatively smaller, hyaline and smooth conidia, and phylogenetic analyses supported this conclusion (Liu et al. 2014; Jayasiri et al. 2019; Phookamsak et al. 2019; this study, Fig. 102). We re-collected N. bambusae Phook. et al. and N. leucaenae Jayasiri et al. from submerged wood in China. Neoroussoella bambusae has longitudinally ribbed ascospores, while N. leucaenae has smooth-walled ascospores.
List of freshwater Neoroussoella species
*Neoroussoella bambusae Phook., Jian K. Liu & K.D. Hyde, Phytotaxa 181(1): 23 (2014)
Facesoffungi number: FoF02414; Fig. 100
Freshwater distribution: China (this study)
Saprobic on submerged wood. Sexual morph: Ascostromata 300–330 μm high, 370–400 diam., immersed under an epidermis, erumpent to semi-immersed, scattered to gregarious, raised, visible as black dome-shaped or shield-shaped on the host surface, coriaceous, black, central ostiolate, with elongate, distinct papilla. Peridium composed of several layers of textura angularis, thick-walled and dark brown to black in outer layer, thin-walled and hyaline inwardly, flattened and thicker at the base, 50 μm wide, thinner at sides, 30 μm wide. Pseudoparaphyses 1.5–2 μm wide, numerous, anastomosing cellular, embedded in a gelatinous matrix. Asci (105–)113–115 × 6–8 μm (\( {\bar{\text{x}}} \) = 114 × 7 μm, n = 10), 8-spored, bitunicate, cylindrical, short to long pedicellate, apically rounded with an ocular chamber. Ascospores 11–14.5 × 4–5.5 μm (\( {\bar{\text{x}}} \) = 12.5 × 5 μm, n = 15), uniseriate to overlapping uniseriate, ellipsoidal to broadly fusiform, 1-septate, constricted at the septum, pale brown to brown or yellowish brown, guttulate, rough-walled, longitudinally ribbed. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 15 mm in 25 days at 25 °C, white from above, yellowish brown from below, surface rough, felt, with dense mycelium, dry, edge entire.
Material examined: CHINA, Yunnan Province, Dehong, on submerged wood in a stream, 25 November 2017, G.N. Wang, HH1A-1 (MFLU 18-1187), living culture MFLUCC 18-1048; ibid., HH1A-2 (HKAS 101750), living culture KUMCC 18-0102.
Notes: Our collection MFLUCC 18-1048 clusters with Neoroussoella bambusae with high bootstrap support (Fig. 102). MFLUCC 18-1048 is identified as N. bambusae based on sequence data which has three, seven (includes three gaps) and three (includes one gap) nucleotide differences in LSU, ITS and TEF sequence data, respectively, with the ex-type strain MFLUCC 11-0124.
Our collection has longer asci (105–115 × 6–8 μm vs. 60–85 × 5–6.5 μm) and ascospores (11–14.5 × 4–5.5 μm vs. 7.5–10 × 3–4 μm) than the holotype (Liu et al. 2014). The elongate, distinct papilla is observed in our collection, but lacking in the holotype (Liu et al. 2014). This is a new habitat and geographical record for N. bambusae from freshwater in China.
*Neoroussoella leucaenae Jayasiri, E.B.G. Jones & K.D. Hyde, Mycosphere 10(1): 106 (2019); Fig. 101
Freshwater distribution: China (this study)
Saprobic on submerged wood. Sexual morph: Ascostromata 140–180 μm high, 110–170 diam., immersed to erumpent, scattered, raised, visible as black, dome-shaped spots and with prominent, elongate neck, coriaceous, black, ostiolate. Ostiole 60–90 μm diam., rounded, brown to dark brown, central. Peridium 10–15 μm wide, composed of several layers of compressed cells of textura angularis, dark brown to black in outer layer, hyaline inwardly, flattened at the base. Pseudoparaphyses 3 μm wide, numerous, cellular, narrow, filamentous, indistinctly septate, anastomosing, embedded in a gelatinous matrix. Asci 65–145 × 4.7–6.5 μm (\( {\bar{\text{x}}} \) = 98 × 5.5 μm, n = 10), 8-spored, bitunicate, cylindrical, pedicellate, apically rounded with an ocular chamber, elongate when in water. Ascospores 7.5–10.7 × 3–4.5 μm (\( {\bar{\text{x}}} \) = 8.8 × 3.5 μm, n = 30), overlapping uniseriate, ellipsoidal to broadly fusiform, 1-septate, constricted at the septum, pale brown to brown, smooth-walled. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony circular, reaching 50 mm in 30 days at 25 °C, white from above, become reddish with age, dark brown from below, surface rough, felt, with dense mycelium, dry, edge undulate.
Material examined: CHINA, Yunnan Province, Pingbian, on submerged wood in a stream, 20 September 2017, W. Dong, WF11A-1 (HKAS 101701), living culture KUMCC 18-0050; ibid., WF11A-2 (MFLU 18-1175).
Notes: Our collection KUMCC 18-0050 clusters with Neoroussoella leucaenae with high bootstrap support (Fig. 102). KUMCC 18-0050 is identified as N. leucaenae based on sequence data which has 100% similarity in ITS sequence data, and one nucleotide difference in TEF sequence data, with the ex-type strain MFLUCC 18-1544. Our collection has longer asci (65–145 × 4.7–6.5 μm vs. 50–60 × 4.5–5.5 μm) than the holotype (Jayasiri et al. 2019). This is a new habitat and geographical record for N. leucaenae from freshwater in China.
Key to freshwater Neoroussoella species
-
1.
Ascospores longitudinally ribbed………N. bambusae
-
1.
Ascospores smooth-walled………N. leucaenae
Testudinaceae Arx, Persoonia 6(3): 366 (1971)
Angustospora Abdel-Aziz, Fungal Diversity 78: 52 (2016)
Saprobic on submerged wood. Sexual morph: Ascomata solitary, immersed to erumpent, uniloculate, globose to subglobose, glabrous, dark brown to black, coriaceous to sub-carbonaceous, with ostiolate papilla. Ostiole central, circular, periphysate. Peridium two-layered, outer layer comprising dark brown to black cells of textura angularis, inner layer comprising hyaline, thick-walled, flattened cells of textura angularis. Pseudoparaphyses numerous, trabeculate, hyaline, distantly septate, branched, persistent, within a gelatinous matrix and anastomosing above asci. Asci 8-spored, bitunicate, fissitunicate, clavate, short pedicellate, apically rounded, with a wide, shallow ocular chamber and faint ring. Ascospores overlapping biseriate, ellipsoidal with pointed ends, straight or curved, dark brown to black, septate, polar cells lighter when young and apical cells with two walls, mostly symmetrical, surrounded by thin, gelatinous, striate layer (Li et al. 2016a). Asexual morph: Undetermined.
Type species: Angustospora nilensis Abdel-Aziz
Notes: Angustospora was introduced to accommodate the freshwater species A. nilensis collected from Egypt (Li et al. 2016a). Angustospora is reminiscent of Caryospora in having large ascospores with a median septum and two additional septa near poles (Ariyawansa et al. 2015; Li et al. 2016a; Jayasiri et al. 2019). However, Angustospora differs from the latter in having smaller ascomata, ellipsoidal ascospores with paler end cells when young and two-walled apical cells, and surrounded by gelatinous, striate layer (Li et al. 2016a). Phylogenetic analyses placed Angustospora and Caryospora in Testudinaceae and Caryosporaceae, respectively (Li et al. 2016a; Wanasinghe et al. 2017). Angustospora appears exclusively saprobic in freshwater habitats.
List of freshwater Angustospora species
*Angustospora nilensis Abdel-Aziz, Fungal Diversity 78: 54 (2016); Fig. 103
Freshwater distribution: Egypt (Li et al. 2016a)
Tetraplosphaeriaceae Kaz. Tanaka & K. Hiray., Stud. Mycol. 64: 177 (2009)
Key to freshwater genera of Tetraplosphaeriaceae
-
1.
Conidia cylindrical………Tetraploa
-
1.
Conidia not as above………2
-
2.
Conidia variable in shape, but often obconical or pyriform………Ernakulamia
-
2.
Conidia ovoid to obpyriform, or subglobose………3
-
3.
Conidia with apical appendages………Triplosphaeria
-
3.
Conidia not as above………Shrungabeeja
Ernakulamia Subram., Kavaka 22/23: 67 (1996) [1994]
Saprobic on submerged wood in freshwater and rotten leaves, branches in terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Colonies effuse, dark brown to black. Mycelium superficial. Conidiophores semi-macronematous. Conidiogenous cells monotretic, integrated, determinate, terminal and intercalary, often clavate, globose or subglobose, smooth or verruculose, subhyaline to brown, cicatrized or non-cicatrized, with a well-defined pore in the middle of each dark scar. Conidia variable in shape but often obconical or pyriform, dark brown to blackish brown, muriform, often verrucose at the base where a pore is often seen, internally filled with a mass of hyaline, septate hyphae sometimes with swollen cells, appendiculate, with cylindrical, straight or flexuous, septate, brown, appendages (Ellis 1976; Delgado et al. 2018).
Type species: Ernakulamia cochinensis (Subram.) Subram.
Notes: Ernakulamia is characterized by monotretic conidiogenous cells (Ellis 1976) and confirmed based on the cultural method (Delgado et al. 2018). Ernakulamia was placed in Tetraplosphaeriaceae based on two specimens of E. cochinensis (PRC 3992 and IMI 114626) (Delgado et al. 2018). They found an internal hyphal structure in E. cochinensis which were also present in Polyplosphaeria Kaz. Tanaka & K. Hiray. and Quadricrura Kaz. Tanaka et al. (Tanaka et al. 2009; Delgado et al. 2018). Phylogeny also confirmed the placement of Ernakulamia in Tetraplosphaeriaceae (Delgado et al. 2018; Hyde et al. 2020b; this study, Fig. 110). Ernakulamia cochinensis was reported from terrestrial habitats (Delgado et al. 2018), while our collection is from freshwater habitats.
List of freshwater Ernakulamia species
*Ernakulamia cochinensis (Subram.) Subram., Kavaka 22/23: 67 (1996) [1994]
Facesoffungi number: FoF09277; Fig. 104
Basionym: Petrakia cochinensis Subram., Beih. Sydowia 1: 15 (1957) [1956]
Synonymy: Piricauda cochinensis (Subram.) M.B. Ellis, More Dematiaceous Hyphomycetes (Kew): 367 (1976)
Freshwater distribution: Thailand (this study)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies effuse, gregarious, black. Mycelium composed of pale brown, septate hyphae. Conidiophores and conidiogenous cells not seen. Conidia 55–85 × 35–55(–70) μm (\( {\bar{\text{x}}} \) = 70 × 14 μm, n = 15), variable in shape but often obconical or pyriform, black, muriform which is not clear when mature, thin-walled, easily cracked, often verrucose at base, with numerous (up to 10), cylindrical, septate, brown, smooth appendages, 6–105 × 3–4 μm.
Culture characteristics: On PDA, colony ellipsoidal, reaching 35 mm in 25 days at 25 °C, grey from above, brown from below, surface rough, with dense mycelium, dry, raised, edge entire.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat161 (MFLU 18-1565), living culture MFLUCC 18-1237.
Notes: Our new collection MFLUCC 18-1237 is identified as Ernakulamia cochinensis based on identical LSU and ITS sequence data with PRC 3992, and phylogenetic analysis (Fig. 110). MFLUCC 18-1237 has larger conidia than in PRC 3992 from the natural substrate (55–85 × 35–55(–70) μm vs. 24–60 × 18–53 μm), but resembles with those from culture (36–81 × 19–56 μm) (Delgado et al. 2018). The conidiogenous cells of E. cochinensis cannot be observed from mature, blackish conidia in our collection. This is a new habitat and geographical record for E. cochinensis from freshwater in Thailand.
New combination of Ernakulamia
*Ernakulamia xishuangbannaensis (Tibpromma & K.D. Hyde) W. Dong, H. Zhang & K.D. Hyde, comb. nov.
Index Fungorum number: IF557934; Facesoffungi number: FoF09278
Basionym: Polyplosphaeria xishuangbannaensis Tibpromma & K.D. Hyde, Fungal Diversity 93: 44 (2018)
Description of this species see Tibpromma et al. (2018)
Notes: Polyplosphaeria xishuangbannaensis was collected from dead leaves of Pandanus sp. (Tibpromma et al. 2018). In the phylogenetic analysis of Tibpromma et al. (2018), they did not include Ernakulamia so that P. xishuangbannaensis clustered with the members of Polyplosphaeria, but without bootstrap support. In Hyde et al. (2020b) and our study (Fig. 110), P. xishuangbannaensis formed a well-supported and stable clade with the members of Ernakulamia. Polyplosphaeria xishuangbannaensis has black conidia which are features of Ernakulamia (Ellis 1976; Delgado et al. 2018; Jayasiri et al. 2019), while Polyplosphaeria Kaz. Tanaka & K. Hiray. has brown conidia (Tanaka et al. 2009; Tibpromma et al. 2018). Based on phylogenetic analyses and morphology, we transfer P. xishuangbannaensis to Ernakulamia. However, Tibpromma et al. (2018) described the monoblastic conidiogenous cells from P. xishuangbannaensis, which are different from the monotretic one of Ernakulamia. More fresh collections are needed to clarify the conidiogenesis of P. xishuangbannaensis.
Shrungabeeja V.G. Rao & K.A. Reddy, Indian J. Bot. 4(1): 109 (1981)
Saprobic on dead branch, culm or submerged wood. Sexual morph: Colonies effuse, blackish brown. Mycelium superficial or immersed. Conidiophores macronematous, mononematous, cylindrical, erect, straight or flexuous, unbranched, septate, pale brown to deep brown, smooth. Conidiogenous cells monoblastic, determinate or percurrently proliferative, pale brown to brown, smooth. Conidia acrogenous, subglobose or turbinate, aseptate, with appendages (Zhang et al. 2009a). Asexual morph: Undetermined.
Type species: Shrungabeeja vadirajensis V.G. Rao & K.A. Reddy
Notes: Shrungabeeja is characterized by macronematous conidiophores, monoblastic, determinate or percurrent conidiogenous cells and subglobose or turbinate conidia with appendages (Zhang et al. 2009a). Ariyawansa et al. (2015) confirmed Shrungabeeja in Tetraplosphaeriaceae based on molecular data of S. longiappendiculata Sommai et al. The type species S. vadirajensis was initially collected from India (Rao and Reddy 1981), later found from China (Zhang et al. 2009a). The sequence data of S. vadirajensis was lacking in previous studies (Rao and Reddy 1981; Zhang et al. 2009a; Ariyawansa et al. 2015). We describe another reference specimen of S. vadirajensis with molecular data. Shrungabeeja species are often recorded from terrestrial habitats (Zhang et al. 2009a; Ariyawansa et al. 2015; Kirschner et al. 2017), we report one new species and one new habitat and geographical record from freshwater. The morphology of Shrungabeeja species are very similar and thus sequence data are of crucial importance to separate them.
List of freshwater Shrungabeeja species
*Shrungabeeja aquatica W. Dong, G.N. Wang & H. Zhang, sp. nov.
Index Fungorum number: IF557935; Facesoffungi number: FoF09279; Fig. 105
Etymology: referring to aquatic habitat of this fungus
Holotype: MFLU 18-0978
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies effuse, brown to dark brown. Mycelium partly superficial, partly immersed, composed of branched, septate, pale brown hyphae. Conidiophores 140–260 μm long, 6–8.5 μm wide, macronematous, mononematous, erect, straight or flexuous, unbranched, smooth, thick-walled, 4–10-septate, pale- to dark brown. Conidiogenous cells 7–10 μm long, 5–5.5 μm wide at base, up to 3.2 μm wide at the apex, monoblastic, terminal, lageniform, determinate or percurrently proliferating, pale brown to brown, smooth. Conidia 30–40 μm diam. (\( {\bar{\text{x}}} \) = 35 μm, n = 15), solitary, dry, acrogenous, subglobose, aseptate, pale brown to brown, internally filled with a mass of hyaline, septate hyphae sometimes with swollen cells, with 4(–5) appendages. Appendages 12–135 × 2.5–3.5 μm, filiform, 5–7- septate, smooth, pale brown to brown.
Culture characteristics: On PDA, colony circular, reaching 5 mm in 15 days at 25 °C, grey from above and below, surface rough, with dense mycelium, dry, raised, edge entire.
Material examined: THAILAND, Chiang Mai Province, on submerged wood in a stream, 29 March 2018, G.N. Wang, L1 (MFLU 18-0978, holotype), ex-type living culture MFLUCC 18-0664.
Notes: Shrungabeeja aquatica is similar to S. vadirajensis in conidial size and length of appendages (Zhang et al. 2009a). However, the former has obvious percurrent proliferations of conidiogenous cells, which are not obvious in S. vadirajensis. Phylogenetic analysis separates them as distinct species (Fig. 110).
*Shrungabeeja vadirajensis V.G. Rao & K.A. Reddy, Indian J. Bot. 4(1): 113 (1981)
Facesoffungi number: FoF09280; Fig. 106
Freshwater distribution: Thailand (this study)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies effuse, blackish brown. Mycelium superficial or immersed. Conidiophores 135–220 μm long, 6–7 μm wide, macronematous, mononematous, erect, cylindrical, pale brown to deep brown, unbranched, 4–7-septate, straight or flexuous, smooth, thick-walled. Conidiogenous cells monoblastic, determinate or percurrently proliferative, pale brown to brown, smooth. Conidia 28–45 μm diam. (\( {\bar{\text{x}}} \) = 32.5 μm, n = 15), 3–4 μm wide at the base, acrogenous, subglobose, ellipsoidal, or turbinate, aseptate, internally filled with a mass of hyaline, septate hyphae sometimes with swollen cells, with (3–)4 horn-like appendages in the anterior region, appendages 20–110 μm long, 3–5.5 μm wide at the base and 1.5–2.5 μm wide at the apex.
Culture characteristics: On PDA, colony circular, reaching 20 mm in 15 days at 25 °C, grey from above, dark brown from below, surface rough, with dense mycelium, dry, raised, edge curved.
Material examined: THAILAND, Chiang Mai Province, on submerged wood in a stream, 1 September 2017, X.D. Yu, 4A (MFLU 17-1721), living culture MFLUCC 17-2362.
Notes: Our new collection MFLUCC 17-2362 is identified as Shrungabeeja vadirajensis based on the characters of conidia (shape and size), appendages (number and length), conidiophores (length and width) and from tropical area (Zhang et al. 2009a). We found several hyaline, septate hyphae or sometimes swollen cells in the conidia which were not described in HMAS189369 (Zhang et al. 2009a).
We further confirm placement of Shrungabeeja in Tetraplosphaeriaceae based on the fresh specimen of the type species with molecular data (Fig. 110) and hyaline, septate hyphae in conidia, which are also present in Ernakulamia, Polyplosphaeria and Quadricrura Kaz. Tanaka et al. (Tanaka et al. 2009). This is a new habitat and geographical record for S. vadirajensis from freshwater in Thailand.
Key to freshwater Shrungabeeja species
-
1.
Conidiophores with obvious percurrent proliferations………S. aquatica
-
1.
Not as above………S. vadirajensis
Tetraploa Berk. & Broome, Ann. Mag. nat. Hist., Ser. 2 5: 459 (1850)
Description of this genus see Hyde et al. (2013)
Type species: Tetraploa aristata Berk. & Broome
Notes: Tetraploa was reinstated, suppressing Tetraplosphaeria Kaz. Tanaka & K. Hiray. by Hyde et al. (2013). Hyde et al. (2020b) doubted that Dwibahubeeja N. Srivast. et al. was a synonym of Tetraploa because of the similarities of T. dwibahubeeja Rajeshkumar et al. and D. indica N. Srivast. et al. (type). However, this cannot be resolved until sequence data of D. indica is available.
Tetraploa is similar to other genera in Tetraplosphaeriaceae in having conidia with several setose appendages, but differs by its globose ascomata, narrowly fusiform ascospores surrounded by a narrow mucilaginous appendage-like sheath and cylindrical, euseptate conidia with setose appendages (Hyde et al. 2013).
The freshwater species Tetrapola scheueri Kaz. Tanaka & K. Hiray. was proposed by Hyde et al. (2013) to replace Tetraplosphaeria tetraploa (Scheuer) Kaz. Tanaka & K. Hiray. The asexual morph of T. scheueri was reported as T. aristata Berk. & Broome based on cultural methods (Scheuer 1991). However, Tanaka et al. (2009) considered T. aristata to be a species-complex composed of phylogenetically diverse lineages. Thus, the identification of T. aristata should be re-evaluated (Tanaka et al. 2009). In our phylogenetic analysis (Fig. 110), two putative strains T. aristata (CBS 996.70) and T. scheueri (CY112) cluster together and there are two nucleotide differences in ITS sequence data, which probably supports the conclusion of Scheuer (1991). However, the real identities of two strains are unknown because their morphology are unavailable (Tanaka et al. 2009; Rodrigues et al. 2011).
List of freshwater Tetraploa species
Tetraploa abortiva Aramb. & Cabello, Mycotaxon 30: 266 (1987)
Freshwater distribution: Argentina (Schoenlein-Crusius and Grandi 2003)
*Tetraploa aristata Berk. & Broome, Ann. Mag. nat. Hist., Ser. 2 5: 459 (1850)
Freshwater distribution: Argentina and Brazil (Schoenlein-Crusius and Grandi 2003), China (Tsui et al. 2001c), Hungary (Révay 1993), India (Karamchand and Sridhar 2008), Peru (Schoenlein-Crusius and Grandi 2003)
Tetraploa ellisii Cooke Grevillea 8(no. 45): 12 (1879)
Freshwater distribution: Peru (Schoenlein-Crusius and Grandi 2003)
*Tetraploa puzheheiensis W. Dong, H. Yang & H. Zhang, sp. nov.
Holotype: MFLU 20-0441
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Mycelium superficial. Conidiophores absent. Conidiogenous cells monoblastic. Conidia 24–35 × 15–24.5 μm (\( {\bar{\text{x}}} \) = 28.5 × 17.5 μm, n = 40), solitary, short cylindrical, dark brown to black, verrucose, consisting of 2–3 columns of 7–9.5 µm wide, 4–5-celled, with 1–3 appendages. Appendages 3–27 µm long, 3–4.5 µm wide at the base, 2–3.5 µm wide at the apex, 0–2-septate, dark brown at the base and hyaline to pale brown at the apex, smooth, unbranched, straight.
Cultural characteristics: Conidia germinated on PDA within 24 hours, germtubes produced from apex of conidia. Colonies on PDA reaching 18–20 mm diam. in 18 days at 25 °C, with dense, floccose, brown mycelium on the surface, reverse brown to dark brown, with undulate, pale brown margin.
Material examined: CHINA, Yunnan Province, Puzhehei Wetland, 24°8ʹ32ʺN, 104°6ʹ58ʺE, on submerged wood, 12 May 2018, H. Yang, P12 (MFLU 20-0441, holotype), ex-type living culture KUMCC 20-0151.
Notes: our collection KUMCC 20-0151 clusters with two putative strains of Tetraploa aristata (CBS 996.70) and T. scheueri (CY112) with high bootstrap support (Fig. 110). Tetraploa scheueri CY112 was sequenced by Rodrigues et al. (2011), without morphological description. However, KUMCC 20-0151 differs from the holotype of T. scheueri GZU 36-91 in having shorter appendages (3–27 µm vs. 263–350 µm) with less septa (0–2-septate vs. 17–22-septate) (Tanaka et al. 2009). The morphology of T. aristata CBS 996.70 also cannot be compared as the conidia were not produced in the culture (Tanaka et al. 2009). Ellis (1949) reported two types of conidia of T. aristata, however, KUMCC 20-0151 only has one type of conidia. Although type A of T. aristata has similar conidial size with KUMCC 20-0151, T. aristata differs in having longer appendages (12–80 µm vs. 3–27 µm) with more septa (1–6-septate vs. 0–2-septate). In addition, there are only two nucleotide differences in ITS sequence data between T. aristata (CBS 996.70) and T. scheueri (CY112), which indicates that these two strains are very likely to be the same species and at least one strain was misidentified. The real identities of CBS 996.70 and CY112 cannot be resolved until their epitypification with sufficient DNA sequence data are obtained in future. Given this, we introduce KUMCC 20-0151 as a new species T. puzheheiensis. Two strains CBS 996.70 and CY112 are named as Tetraploa spp. in our phylogenetic tree (Fig. 110).
*Tetraploa scheueri Kaz. Tanaka & K. Hiray., Fungal Diversity 63: 253 (2013); Fig. 108
Index Fungorum number: IF557936; Facesoffungi number: FoF09281; Fig. 107
Etymology: referring to aquatic habitat of this fungus
Basionym: Massarina tetraploa Scheuer, Mycol. Res. 95: 126 (1991)
Synonymy: Tetraplosphaeria tetraploa (Scheuer) Kaz. Tanaka & K. Hiray., Stud. Mycol. 64: 182 (2009)
Freshwater distribution: UK (Scheuer 1991)
*Tetraploa yunnanensis W. Dong, H. Yang & H. Zhang, sp. nov.
Index Fungorum number: IF557937; Facesoffungi number: FoF09282; Fig. 109
Etymology: referring to Yunnan province, where the holotype was collected
Holotype: MFLU 19-0524
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Mycelium superficial. Conidiophores absent. Conidiogenous cells monoblastic. Conidia 30–50 × 16–22 μm (\( {\bar{\text{x}}} \) = 43 × 19 μm, n = 10), solitary, short to long cylindrical, brown to dark brown, verrucose, consisting of 2–3 columns of 7.5–10 µm wide, 4–6-celled, with 1–3 appendages. Appendages 25–83 µm long, 4–5.5 µm wide at the base, 1.5–2.5 µm wide at the apex, 1–5-septate, brown, smooth, unbranched, straight.
Cultural characteristics: Conidia germinated on PDA within 24 hours. Colonies on PDA reaching 20–25 mm diam. in 18 days at 25 °C, with dense, floccose, brown mycelium on the surface, reverse brown to dark brown, with undulate, pale brown margin.
Material examined: CHINA, Yunnan Province, Puzhehei Wetland, 24°8ʹ32ʺN, 104°6ʹ58ʺE, on submerged wood, 12 May 2018, H. Yang, P13 (MFLU 19-0524, holotype), ex-type living culture MFLUCC 19-0319; Thailand, Chiang Mai Province, on submerged wood, 9 February 2018, G.N. Wang, A66 (MFLU 18-0959), living culture MFLUCC 18-0652.
Notes: Tetraploa yunnanensis clusters with a strain of T. sasicola (NCYUCC 19-0371) with high bootstrap support (Fig. 110). Tetraploa sasicola NCYUCC 19-0371 (MFLU 19-2698) is an ascomycetous species characterized by hyaline to yellowish brown ascospores without appendages (Hyde et al. 2020b). Although asexual morph of NCYUCC 19-0371 was not formed in culture (Hyde et al. 2020b), phylogeny clearly separates them as distinct species (Fig. 110).
We found that NCYUCC 19-0371 clusters in a separated clade between Tetraploa yunnanensis (MFLUCC 19-0319, ex-type strain) and T. sasicola (KT 563, ex-type strain) with high bootstrap support (Fig. 110). Comparison of single LSU and ITS sequence data also shows 14 and 25 nucleotide differences between NCYUCC 19-0371 and KT 563, respectively. This indicates that NCYUCC 19-0371 and KT 563 are phylogenetically different species (Jeewon and Hyde 2016).
NCYUCC 19-0371 differs from KT 563 in having larger asci (97–109 × 22–23 μm vs. 61–100 × 9–13 μm) and wider ascospores (24–29 × 4–14 μm vs. 22.5–34 × 3–5 μm). Additionally, NCYUCC 19-0371 has hyaline to yellowish brown ascospores without appendages, while KT 563 has hyaline ascospores with a narrow sheath drawn out at both ends, which is longer at the apex than the one at the base (Tanaka et al. 2009; Hyde et al. 2020b). NCYUCC 19-0371 bearing the name Tetraploa sasicola is probably a noval species, but the introduction should be performed with re-examination of the specimen MFLU 19-2698 or new collectionis.
Key to freshwater Tetraploa species
-
1.
Conidia composed of 4 columns………2
-
1.
Conidia composed of 2–3 columns………4
-
2.
Conidia > 39 μm long on average, 30–51 × 15–26 μm………T. ellisii
-
2.
Conidia mostly < 39 μm long………3
-
3.
Conidial appendages 263–350 µm long, 17–22-septate………T. scheueri
-
3.
Conidial appendages 12–80 µm long, 1–6-septate………T. aristata
-
4.
Conidia < 15 µm wide………T. abortiva
-
4.
Conidia > 15 µm wide………5
-
5.
Conidial appendages 25–83 µm long………T. yunnanensis
-
5.
Conidial appendages 3–27 µm long………T. puzheheiensis
Triplosphaeria Kaz. Tanaka & K. Hiray., Stud. Mycol. 64: 185 (2009)
Saprobic on decaying or submerged bamboo in freshwater or terrestrial habitats. Sexual morph: Ascomata scattered to gregarious, immersed under the epidermis, subglobose, uniloculate, glabrous, with or without a short neck, periphysate. Peridium rim-like at sides, composed of vertically orientated rectangular to cylindrical, hyaline, hyphoid cells, poorly developed at the base. Pseudoparaphyses numerous, trabeculate, narrow, hyaline, indistinctly septate, branched. Asci bitunicate, fissitunicate, cylindrical to clavate, with rounded apex and short pedicellate. Ascospores 8-spored, fusiform, with rounded ends, 1-septate, hyaline, smooth, with an entire sheath (Tanaka et al. 2009). Asexual morph: Hyphomycetous. Conidiophores absent. Conidiogenous cells monoblastic. Conidia ovoid to obpyriform, brown, verrucose at the base, composed of three columns, with three setose appendages at the apex (Tanaka et al. 2009).
Type species: Triplosphaeria maxima Kaz. Tanaka & K. Hiray.
Notes: Triplosphaeria was introduced for massarina-like ascomycetes and tetraploa-like asexual morphs (Tanaka et al. 2009). Triplosphaeria is similar to Tetraploa in overall morphology of conidia, but differs by its hemispherical ascomata with flattened base (Tanaka et al. 2009; Hyde et al. 2013). Phylogeny clearly separates them as two distinct genera (Tanaka et al. 2009; Hyde et al. 2020b; this study, Fig. 110). Triplosphaeria acuta Kaz. Tanaka & K. Hiray. is the only species collected from freshwater habitats (Tanaka et al. 2009).
List of freshwater Triplosphaeria species
*Triplosphaeria acuta Kaz. Tanaka & K. Hiray., Stud. Mycol. 64: 186 (2009)
Freshwater distribution: Japan (Tanaka et al. 2009)
Torulaceae Corda, Deutschl. Fl., 3 Abt. (Pilze Deutschl.) 2: 71 (1829)
Key to freshwater genera of Torulaceae
-
1.
Conidiogenous cells holoblastic………Torula
-
1.
Conidiogenous cells enteroblastic………2
-
2.
Conidia pyriform to rostrate, narrowly cylindrical and obtuse at the apex………Rostriconidium
-
2.
Conidia without above characters………3
-
3.
Conidia cylindrical or obclavate, solitary or in short chains………Dendryphion
-
3.
Conidia clavate to subcylindrical, branch chains………Neotorula
Dendryphion Wallr., Fl. crypt. Germ. (Norimbergae) 2: 300 (1833)
Saprobic on dead stems of herbaceous plants and decaying wood or submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies effuse, hairy or velvety, dark grey, olive, reddish brown or black. Mycelium immersed. Stroma when present immersed or partly superficial. Conidiophores macronematous, mononematous, usually branched at the apex forming a stipe and head; stipe straight or flexuous, usually stout, erect, brown to black, smooth or with the upper part verruculose; branches usually paler, smooth or verruculose. Conidiogenous cells monotretic or polytretic, sympodial, integrated or discrete, terminal and intercalary on branches, clavate, cylindrical or doliiform, cicatrized; scars usually large and dark. Conidia acropleurogenous, catenate or solitary, dry, cylindrical with rounded ends or obclavate, sometimes cheiroid, straight or somewhat curved, pale to mid brown or olivaceous brown, multi-septate, simple or branched, smooth or verrucose, thin-walled (Ellis 1971; Su et al. 2016b).
Type species: Dendryphion comosum Wallr.
Notes: The hyphomycetous genus Dendryphion was placed in Torulaceae based on D. europaeum Crous & R.K. Schumach. (Crous et al. 2015a). Dendryphion formed a sister clade to Neotorula Ariyaw. et al., but differs in having cylindrical or obclavate conidia without branched chains (Hyde et al. 2016b; Su et al. 2016b, 2018). Five Dendryphion species were confirmed in Torulaceae with molecular data, four of which were collected from freshwater habitats in China (see list below). They formed a well-supported monophyletic clade in Su et al. (2018). However, the sequence data of the type species D. comosum is lacking. All freshwater Dendryphion species have similar size of conidiophores and conidia, except D. nanum (Nees) S. Hughes which has the shortest conidiophores and longest conidia (Su et al. 2016b, 2018). The length and width of conidiophores can distinguish the other three species.
List of freshwater Dendryphion species
*Dendryphion aquaticum H.Y. Su & K.D. Hyde, Fungal Diversity (2016); Fig. 111p–v
Freshwater distribution: China (Su et al. 2016b)
*Dendryphion fluminicola Z.L. Luo, D.J. Bhat & K.D. Hyde, Mycol. Progr. 17(5): 533 (2018)
Freshwater distribution: China (Su et al. 2018)
*Dendryphion nanum (Nees) S. Hughes, Can. J. Bot. 36: 761 (1958); Fig. 111a–g
Basionym: Helminthosporium nanum Nees [as ‘Helmisporium’], Syst. Pilze (Würzburg): 67 (1816) [1816–17]
Freshwater distribution: China (Su et al. 2016b)
*Dendryphion submersum H.Y. Su & K.D. Hyde, Fungal Diversity (2016); Fig. 111h–o
Freshwater distribution: China (Su et al. 2016b)
Key to freshwater Dendryphion species
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1.
Conidiophores < 100 μm long………D. nanum
-
1.
Conidiophores > 100 μm long………2
-
2.
Conidiophores < 200 μm long………D. fluminicola
-
2.
Conidiophores > 200 μm long………3
-
3.
Conidiophores 7.5–11.5 μm wide………D. aquaticum
-
3.
Conidiophores 3.5–4.5 μm wide………D. submersum
Neotorula Ariyaw., Z.L. Luo & K.D. Hyde, Fungal Diversity 80: 393 (2016)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies on the substratum superficial, effuse, gregarious, hairy, dark brown. Mycelium immersed, composed of septate, branched, thin-walled, smooth, pale brown hyphae. Conidiophores macronematous, mononematous, erect, cylindrical, usually with short branches near the apex, straight or flexuous, dark brown, septate, smooth. Conidiogenous cells tretic, with a distinct pore, integrated, terminal, doliiform or lageniform, subhyaline to pale brown. Conidia acrogenous, in branched chains, dry, clavate to subcylindrical, straight, pale green to brown, septate, verruculose, thin-walled (Su et al. 2016b).
Type species: Neotorula aquatica Z.L. Luo & K.D. Hyde
Notes: Neotorula was introduced to accommodate a torula-like species N. aquatica collected from freshwater habitats in China (Su et al. 2016b). Neotorula shares similar characters with Torula Pers. in having clavate to subcylindrical, brown conidia forming in branched chains. However, the former has macronematous and septate conidiophores, while the latter has micronematous conidiophores reduced to conidiogenous cells or with one brown supporting cell (Su et al. 2016b). The placement of Neotorula was confirmed in Torulaceae based on sequence data of two freshwater species, N. aquatica and N. submersa Z.L. Luo et al. (Hyde et al. 2016b; Su et al. 2016b). Both species can be distinguished by the length of conidia (see key below).
List of freshwater Neotorula species
*Neotorula aquatica Z.L. Luo & K.D. Hyde, Fungal Diversity (2016); Fig. 112a–d
Freshwater distribution: China (Su et al. 2016b)
*Neotorula submersa Z.L. Luo, H.Y. Su & K.D. Hyde, Fungal Diversity (2016); Fig. 112e–k
Freshwater distribution: China (Hyde et al. 2016b)
Key to freshwater Neotorula species
-
1.
Conidia 11–16 μm long………N. aquatica
-
1.
Conidia 16–22 μm long………N. submersa
Rostriconidium Z.L. Luo, K.D. Hyde & H.Y. Su, Mycol. Progr. 17(5): 536 (2018)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies effuse, scattered, hairy, brown. Mycelium mostly immersed, composed of pale brown, septate, unbranched hyphae. Conidiophores macronematous, mononematous, single, erect, subcylindrical, straight or flexuous, dark brown to black, paler at the apex, septate, smooth. Conidiogenous cells monotretic or polytretic, integrated, terminal, cylindrical, dark brown. Conidia solitary, dry, pyriform to rostrate, narrowly cylindrical and obtuse at the apex, dark brown to black, with a thick, black, truncate basal scar and a pale cell above the scar (Su et al. 2018).
Type species: Rostriconidium aquaticum Z.L. Luo, K.D. Hyde & H.Y. Su
Notes: Rostriconidium was introduced for a freshwater species R. aquaticum collected from China (Su et al. 2018). Rostriconidium nested in Torulaceae with high bootstrap support (Su et al. 2018; Tibpromma et al. 2018). Rostriconidium is similar to Sporidesmioides Jun F. Li et al. in having macronematous, dark brown to black conidiophores and dark brown to black, similar shape of ascospores with cylindrical, narrower apex (Li et al. 2016b; Su et al. 2018). However, the former has tretic conidiogenous cells, the latter having blastic. Phylogeny clearly separates them as distinct genera (Tibpromma et al. 2018).
List of freshwater Rostriconidium species
*Rostriconidium aquaticum Z.L. Luo, K.D. Hyde & H.Y. Su, Mycol. Progr. 17(5): 536 (2018)
Freshwater distribution: China (Su et al. 2018)
Torula Pers., Ann. Bot. (Usteri) 15: 25 (1795)
Saprobic in freshwater or terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Colonies effuse, velvety, dark brown to black. Mycelium mostly immersed. Conidiophores micronematous, reduced to conidiogenous cells, or with one supporting cell. Conidiogenous cells mono- to polyblastic, solitary on mycelium, doliiform to ellipsoid or clavate, cupulate, brown, smooth to verruculose. Conidia acrogenous, dry, brown, branched chains, phragmosporous, strongly constricted at the septa, smooth to verrucose; conidiogenous cell and fertile cell in conidial chains (where branching occurs) darker brown than other cells (Crous et al. 2015a).
Type species: Torula herbarum (Pers.) Link
Notes: Crous et al. (2015a) designated a neotype (CPC 24114) for the type species Torula herbarum. Torula has over 500 epithets in Index Fungorum (2020) and recently introduced species were manily based on molecular data (Su et al. 2016b, 2018; Hyde et al. 2017, 2019). Four freshwater species have been confirmed in Torula based on sequence data (see list below). They can be distinguished by conidial size and chains.
List of freshwater Torula species
*Torula aquatica Z.L. Luo, K.D. Hyde, X.J. Su & H.Y. Su, Mycol. Progr. 17(5): 538 (2018)
Freshwater distribution: China (Su et al. 2018)
*Torula fici Crous [as ‘ficus’], IMA Fungus 6(1): 192 (2015)
Freshwater distribution: China (Su et al. 2018)
*Torula gaodangensis J. Yang & K.D. Hyde, Fungal Diversity 87: 113 (2017)
Freshwater distribution: China (Hyde et al. 2017)
*Torula masonii Crous, IMA Fungus 6(1): 195 (2015)
Freshwater distribution: China (Su et al. 2018)
Key to freshwater Torula species
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1.
Conidia < 20 μm long………2
-
1.
Conidia > 20 μm long………3
-
2.
Conidia 8.5–13.5 × 4.5–5.5 μm………T. aquatica
-
2.
Conidia 11–23 × 5.5–6.5 μm………T. fici
-
3.
Conidia in branched chains………T. masonii
-
3.
Conidia not in chains………T. gaodangensis
Trematosphaeriaceae K.D. Hyde, Y. Zhang ter, Suetrong & E.B.G. Jones, Fungal Diversity 63: 254 (2013)
Key to freshwater genera of Trematosphaeriaceae
-
1.
Ascospores hyaline………Falciformispora
-
1.
Ascospores brown………2
-
2.
Ascospores vermiform………Hadrospora
-
2.
Ascospores fusiform………Trematosphaeria
Falciformispora K.D. Hyde, Mycol. Res. 96(1): 26 (1992)
Saprobic on submerged wood, intertidal mangrove wood, dead wood or isolated from mycetoma of humans. Sexual morph: Ascomata solitary or gregarious, erumpent becoming superficial, subglobose or ovoid, glabrous, black, coriaceous, ostiolate. Peridium two-layered, outer layer composed of thick-walled angular or rounded brown cells, inner layer composed of elongate, hyaline cells. Pseudoparaphyses numerous, cellular, narrowly cylindrical, septate, anastomosing. Asci 8-spored, bitunicate, fissitunicate, clavate, pedicellate, with an ocular chamber. Ascospores bi- to tri-seriate, fusiform, hyaline, multiseptate, surrounded by a thin mucilage sheath with or without a single scythe-like appendage (Hyde 1992a). Asexual morph: Undetermined.
Type species: Falciformispora lignatilis K.D. Hyde
Notes: Falciformispora was introduced to accommodate F. lignatilis collected from intertidal mangrove wood (Hyde 1992a). Falciformispora is characterized by fusiform, hyaline, multiseptate ascospores surrounded by a mucilaginous sheath and appendage (Hyde 1992a). Falciformispora lignatilis was later collected from freshwater habitats in USA (Raja et al. 2009b). It differs from another freshwater species F. aquatica D.F. Bao et al. in having smaller asci (110–136 × 20–32 µm vs. 115–167 × 28–47 µm) and ascospores (42–50 × 7.5–10 µm vs. 48–59 × 10–16 µm) (Hyde et al. 2019). Both F. aquatica and F. lignatilis have a single scythe-like appendage, while F. uttaraditense Boonmee et al. lacks this character (Hyde et al. 2020b). Falciformispora uttaraditense was introduced based solely on ITS sequence data and morphology (Hyde et al. 2020b).
List of freshwater Falciformispora species
*Falciformispora aquatica D.F. Bao, K.D. Hyde & H.Y. Su, Fungal Diversity 96: 73 (2019)
Freshwater distribution: Thailand (Hyde et al. 2019)
*Falciformispora lignatilis K.D. Hyde, Mycol. Res. 96(1): 27 (1992)
Freshwater distribution: USA (Raja et al. 2009b)
*Falciformispora uttaraditensis Boonmee & Huanraluek, Fungal Diversity 100: 127 (2020)
Freshwater distribution: Thailand (Hyde et al. 2020b)
Key to freshwater Falciformispora species
-
1.
Ascospores without a single scythe-like appendage………F. uttaraditense
-
1.
Ascospores with a single scythe-like appendage………2
-
2.
Ascospores 48–59 × 10–16 µm………F. aquatica
-
2.
Ascospores 42–50 × 7.5–10 µm………F. lignatilis
Hadrospora Boise, Mem. N. Y. bot. Gdn 49: 310 (1989)
Saprobic on woody or monocotyledonous hosts in terrestrial or submerged wood in freshwater habitats. Sexual morph: Ascomata solitary to scattered, immersed to semi-immersed, erumpent, with black dots on the host surface, uniloculate, globose to subglobose, dark brown to black, glabrous, ostiolate, with a minute papilla. Peridium thin-walled, composed of black, broad pseudoparenchymatous cells, arranged in a textura angularis. Pseudoparaphyses numerous, trabeculate, filamentous, distinctly septate, frequently anastomosing. Asci 8-spored, bitunicate, fissitunicate, ovoid to ampulliform, sessile to minutely pedicellate, apically rounded, with indistinct ocular chamber. Ascospores uni- to tri-seriate, broadly fusiform, vermiform, brown to reddish-brown, paler at the end cells, phragmosporous, with or without sheath (Tanaka and Harada 2003a; Phookamsak et al. 2014). Asexual morph: zalerion-like. Hyphomycetous. Conidia holoblastic, helicoid, multiseptate, constricted at septa, brown to dark brown, smooth (Tanaka and Harada 2003a).
Type species: Hadrospora fallax (Mouton) Boise
Notes: Hadrospora was introduced to accommodate two species H. clarkii (Sivan.) Boise and H. fallax, which were transferred from Trematosphaetria (Boise 1989). The familial placement of Hadrospora is ambiguous due to the dearth of sequences. Hadrospora was accepted in Phaeosphaeriaceae (Hyde et al. 2013), but later suggested in Trematosphaeriaceae based on morphology (Phookamsak et al. 2014). Hadrospora has ovoid to ampulliform asci and hyphomycetous asexual morph (Tanaka and Harada 2003a; Phookamsak et al. 2014). Phaeosphaeriaceae members mostly have cylindrical to cylindri-clavate asci and coelomycetous asexual morphs (Hyde et al. 2013). We place Hadrospora in Trematosphaeriaceae following Phookamsak et al. (2014) and Wijayawardene et al. (2018, 2020), until sequence data of H. fallax are obtained to confirm its familial placement.
The ascospore size of Hadrospora fallax in the holotype (BR5 020009617141) are 55–80 × 16–22 µm (Zhang et al. 2012b; Phookamsak et al. 2014). Tanaka and Harada (2003a) described the ascospores as larger, 63.5–104.5 × 17.5–29 µm, with a conspicuous sharply delimited sheath which was not mentioned in the holotype. Hadrospora fallax produced a zalerion-like asexual morph in PDA culture (Tanaka and Harada 2003a).
List of freshwater Hadrospora species
Hadrospora fallax (Mouton) Boise, Mem. N. Y. bot. Gdn 49: 310 (1989); Fig. 113
Basionym: Trematosphaeria fallax Mouton, Bull. Soc. R. Bot. Belg. 25(no. 1): 155 (1886)
Freshwater distribution: China (Luo et al. 2004)
Trematosphaeria Fuckel, Jb. nassau. Ver. Naturk. 23–24: 161 (1870) [1869–70]
Saorobic on lignocellulosic material in mangroves and terrestrial or submerged wood in freshwater habitats. Sexual morph: Ascomata solitary or clustered in groups, immersed, becoming erumpent to semi-immersed, unilocular, subglobose, black, coriaceous, with ostiolate papilla. Peridium uneven in thickness, a single layer, composed of small, heavily pigmented, thick-walled cells of textura angularis. Pseudoparaphyses dense, cellular, septate, embedded in mucilage, branching and anastomosing between and above the asci. Asci 8-spored, bitunicate, fissitunicate, clavate, with a short, thick, furcate pedicellate, with a truncate ocular chamber. Ascospores uni- to bi-seriate, fusiform, dark brown, trans-septate, secondary septum forming late or often absent, deeply constricted at the median septum, variously ornamented (Zhang et al. 2008b; Hyde et al. 2013). Asexual morph: Undetermined. Hyphopodia-like structures were produced in culture of Trematosphaeria pertusa (CBS 122368, ex-epitype) (Zhang et al. 2008b).
Type species: Trematosphaeria pertusa Fuckel
Notes: Trematosphaeria is an old genus and comprises over 200 epithets in Index Fungorum (2020). The type species T. pertusa formed a robust phylogenetic clade with Falciformispora lignatilis in Trematosphaeriaceae (Suetrong et al. 2009, 2011b; Zhang et al. 2009c; Hyde et al. 2013). Two strains of T. hydrela (Rehm) Sacc. (CBS 880.70 and HKUCC 10666) clustered in Lindgomycetaceae, which was phylogenetically distant from Trematosphaeriaceae (Tsang et al. 2014; Hyde et al. 2017; this study, Fig. 2). Tsang et al. (2014) thought that these strains were likely to be misnamed. The two strains need verification to confirm if they are misnamed or should be transferred T. hydrela to Lindgomycetaceae. We place T. hydrela in Trematosphaeriaceae for now. Four freshwater Trematosphaeria species can be distinguished by septation and dimension of ascospores.
List of freshwater Trematosphaeria species
Trematosphaeria confusa (Garov.) Boise & D. Hawksw., Mycologia 77(2): 232 (1985)
Basionym: Verrucaria confusa Garov., Tentam. Dispos. Lich. Langob.: 77 (1865)
Synonymy: Didymosphaeria confusa (Garov.) Rehm, Hedwigia 18: 165 (1879)
Freshwater distribution: Australia (Hyde 1995c), Malaysia (Ho et al. 2001)
*Trematosphaeria hydrela (Rehm) Sacc., Syll. fung. (Abellini) 2: 117 (1883)
Basionym: Melanomma hydrelum Rehm, Hedwigia 21(6): 82 (1882)
Synonymy: Caryospora callicarpa Sacc., Michelia 1(no. 3): 331 (1878)
Melanomma callicarpum Berl., Icon. fung. (Abellini) 1(1): 37 (1890)
Trematosphaeria callicarpa (Sacc.) Sacc., Syll. fung. (Abellini) 2: 116 (1883)
Freshwater distribution: Union of Soviet Socialist Republics (Petrak 1925)
Trematosphaeria lineolatispora K.D. Hyde, Mycol. Res. 96(1): 28 (1992)
Freshwater distribution: USA (Raja et al. 2009b)
*Trematosphaeria pertusa (Pers.:Fr.) Fuckel, Jb. nassau. Ver. Naturk. 23–24: 161 (1870) [1869–70]
Basionym: Sphaeria pertusa Pers., Syn. meth. fung. (Göttingen) 1: 83 (1801)
Synonymy: see Index Fungorum (2020)
Freshwater distribution: England (Eaton and Jones 1971; Eaton 1972; Kane et al. 2002), Hungary (Révay and Gönczöl 1990), Japan (Tanaka et al. 2015)
Key to freshwater Trematosphaeria species (updated from (Tanaka et al. 2005a))
-
1.
Ascospores 1–3-septate………2
-
1.
Ascospores 3–7-septate………3
-
2.
Ascospores (30–)34–45(–52) × (8–)8.5–11 μm………T. confusa
-
2.
Ascospores (21–)22–32(–34) × 6–10 μm………T. pertusa
-
3.
Ascospores > 70 μm long………T. hydrela
-
3.
Ascospores < 50 μm long………T. lineolatispora
Wicklowiaceae Ariyaw. & K.D. Hyde, Fungal Diversity 75: 126 (2015)
Wicklowia Raja, A. Ferrer & Shearer, Mycoscience 51(3): 210 (2010)
Saprobic on submerged wood. Sexual morph: Ascomata solitary to gregarious, immersed to erumpent, uniloculate, subglobose, flattened dorsiventrally, glabrous, dark brown to black, ostiolate, visible as a black oval to circular, shallow, crater-like depression on the substrate. Peridium thin, composed of several layers of small pseudoparenchymatic cells. Pseudoparaphyses sparse or numerous, cellular, hyaline, septate, embedded in a gel matrix. Asci 8-spored, bitunicate, fissitunicate, cylindric-clavate to broadly clavate, sessile or short pedicellate, rounded at the apex, with an ocular chamber when immature. Ascospores bi- to tri-seriate, ellipsoidal-oblong, rounded at the apices, hyaline, 1-septate, asymmetrical, smooth, thin-walled, surrounded by a distinctly mucilaginous sheath (Raja et al. 2010a). Asexual morph: Undetermined.
Type species: Wicklowia aquatica Raja, A. Ferrer & Shearer
Notes: Wicklowia was introduced to accommodate the freshwater species W. aquatica isolated from submerged wood in Costa Rica and Florida (Raja et al. 2010a). The second species W. submersa Boonmee et al. was collected from submerged wood in Thailand (Boonmee et al. 2019). Both species share similar morphological characters in the shape and size of ascomata, asci and ascospores (Raja et al. 2010a; Boonmee et al. 2019). They can be distinguished by the appendages and sheaths of the ascospores.
List of freshwater Wicklowia species
*Wicklowia aquatica Raja, A. Ferrer & Shearer, Mycoscience 51: 211 (2010); Fig. 114
Freshwater distribution: USA (Raja et al. 2010a)
*Wicklowia submersa Boonmee, Sorvongxay & K.D. Hyde, Phytotaxa 411: 76 (2019)
Freshwater distribution: Thailand (Boonmee et al. 2019)
Key to freshwater Wicklowia species
-
1.
Ascospores surrounded by a gelatinous sheath, with filamentous appendages………W. aquatica
-
1.
Ascospores surrounded by a distinctly mucilaginous sheath, without any appendages………W. submersa
Pleosporales genera incertae sedis
In this section, we list freshwater genera belonging to Pleosporales genera incertae sedis (Wijayawardene et al. 2018, 2020). The familial placements need to be clarified with more fresh collections and sequence data.
Ascorhombispora L. Cai & K.D. Hyde, Cryptog. Mycol. 28: 294 (2007)
Saprobic on submerged bamboo. Sexual morph: Ascomata solitary or gregarious, superficial, uniloculate, globose to subglobose, dark brown to black, with ostiolate papilla. Peridium thin, comprising two layers of relatively thin-walled cells of textura angularis. Pseudoparaphyses absent. Asci 8-spored, bitunicate, obpyriform, broadly clavate to saccate, pedicellate, with rounded apex, deliquescent at maturity. Ascospores overlapping bi- to tri-seriate, broadly fusiform to rhombic, straight, 3-euseptate, not constricted at septa, median septum wide, forming a darker band, central cells large, trapezoid, dark brown to black, verruculose, thick-walled, with bipolar, small, hemispherical, subhyaline to light brown cells, surrounded by gelatinous mucilaginous sheath (Cai and Hyde 2007b). Asexual morph: Undetermined.
Type species: Ascorhombispora aquatica L. Cai & K. D. Hyde
Notes: The monotypic genus Ascorhombispora is typified by A. aquatica L. Cai & K. D. Hyde (Cai and Hyde 2007b). The genus is characterized by globose to subglobose ascomata, obpyriform, broadly clavate to saccate, deliquescent asci without a pseudoparaphyses, and rhombic, 3-euseptate, dematiaceous ascospores with smaller, subhyaline, bipolar cells (Cai and Hyde 2007b). Ascorhombispora resembles Caryospora in having superficial ascomata, saccate asci and large dematiaceous ascospores with sheath, whereas the latter has larger, carbonaceous ascomata, numerous pseudoparaphyses, fusiform to broad-ellipsoid or biconic ascospores without subhyaline, bipolar cells (Ariyawansa et al. 2015). Phylogenetic analyses clearly separated them (Cai and Hyde 2007b; Shearer et al. 2009). Ascorhombispora is morphologically and phylogenetically not conclusively associated with any families in Pleosporales (Shearer et al. 2009). We re-examined the holotype of Ascorhombispora aquatica and did not find the verrucose ascospores mentioned in Cai and Hyde (2007b), a feature probably obvious only in fresh specimen.
List of freshwater Ascorhombispora species
*Ascorhombispora aquatica L. Cai & K. D. Hyde, Cryptog. Mycol. 28: 295 (2007); Fig. 115
Freshwater distribution: China (Cai and Hyde 2007b)
Fusiformiseptata W. Dong, H. Zhang & K.D. Hyde, gen. nov.
Index Fungorum number: IF557938; Facesoffungi number: FoF09283
Etymology: referring to fusiform spores of this genus
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata black, scattered, immersed with a neck erumpent through host surface, ellipsoidal or obovoid, coriaceous, ostiolate. Neck subcylindrical or irregular, with flattened top, thick-walled, composed of two-layered peridium, with orange pigment. Peridium comprising several layers of dark brown, thick-walled, compressed cells of textura epidermoidea or irregular cells. Pseudoparaphyses numerous, cellular, broadly filiform, hyaline, septate, branched. Asci 8-spored, bitunicate, clavate, short pedicellate, apically rounded with well-developed ocular chamber. Ascospores biseriate, fusiform, hyaline, septate, asymmetrical, thin-walled. Asexual morph: Undetermined.
Notes: Multigene phylogenetic analysis shows that our new collection MFLU 18-1721 forms an independent lineage in Pleosporales (Fig. 2). Fusiformiseptata is therefore introduced for this freshwater taxon. Fusiformiseptata has a prominent neck with orange pigment on the inner wall and forms an arrow-shaped base to the ascomata. These characters are special in Pleosporales and warrant a new genus.
List of freshwater Fusiformiseptata species
*Fusiformiseptata crocea W. Dong, H. Zhang & K.D. Hyde, sp. nov.
Index Fungorum number: IF557939; Facesoffungi number: FoF09284; Fig. 116
Etymology: “crocea” in reference to the orange pigment in the neck
Holotype: MFLU 18-1721
Saprobic on decaying wood submerged in freshwater. Sexual morph: Ascomata 255–280 μm high, 190–220 μm wide, black, scattered, immersed with a neck erumpent through host surface, uniloculate, ellipsoidal or obovoid, arrow-shaped at the basal region, coriaceous, ostiolate. Neck 230–260 μm high, 270–290 μm wide, 75–95 μm thick, prominent, subcylindrical or irregular, with flattened top, thick-walled, composed of two layers, with outer wall comprising several layers of thick-walled, dark brown to black cells of textura epidermoidea, inner wall comprising thin-walled, hyaline cells of textura epidermoidea with orange pigment. Peridium 30–70 μm thick, comprising several layers of dark brown, thick-walled, compressed cells of textura epidermoidea or irregular cells. Pseudoparaphyses 2.5 μm diam., numerous, cellular, broadly filiform, hyaline, septate, branched. Asci (85–)95–135(–150) × 16–20(–23) μm (\( {\bar{\text{x}}} \) = 112 × 18.5 μm, n = 15), 8-spored, bitunicate, clavate, short pedicellate, apically rounded with well-developed ocular chamber. Ascospores 36–42 × 6–9 μm (\( {\bar{\text{x}}} \) = 40 × 8 μm, n = 10), biseriate, fusiform, straight or curved, hyaline, 1-septate when young, 4(–5)-septate when mature, deeply constricted at the central septum, asymmetrical, upper part shorter than lower part, guttulate, thin-walled, smooth, with a mucilaginous sheath, 15–25 μm wide. Asexual morph: Undetermined.
Culture characteristics: On PDA, colony irregular, reaching 25 mm in 10 days at 25 °C, grey from above, brown from below, surface rough, mucoid, raised, umbonate, edge undulate.
Material examined: THAILAND, Songkhla Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat1111-1 (MFLU 18-1721, holotype), ex-type living culture MFLUCC 18-1415; ibid., hat1111-2 (HKAS 105059, isotype), ex-type living culture KUMCC 19-0080.
Isthmosporella Shearer & Crane, Mycologia, 91: 141 (1999)
Saprobic on submerged wood. Sexual morph: Ascomata scattered on natural substrate, immersed to superficial, globose, oblique, black, glabrous, membranous, rostrate. Neck short, cylindrical, periphysate. Peridium two-layered, outer layer composed of brown, fusoid-cylindric pseudoparenchyma cells, inner layer composed of compressed, subhyaline to light brown, fusoid cells. Pseudoparaphyses sparse, cellular, broad, hyaline, septate. Asci 8-spored, bitunicate, fissitunicate, ventricose to clavate, broadly rounded at the apex, without an apical apparatus or oculus, short pedicellate. Ascospores tri- to tetra-seriate, cylindrical to fusoid, isthmoid at center, tapering at both ends, straight to slightly curved, hyaline, phragmoseptate, constricted at septa, surrounded by a gelatinous sheath (Shearer and Crane 1999). Asexual morph: Undetermined.
Type species: Isthmosporella pulchra Shearer & Crane
Notes: The monotypic genus Isthmosporella, typified by I. pulchra Shearer & Crane, was collected from submerged, decorticated wood in USA (Shearer and Crane 1999). It was initially placed in Phaeosphaeriaceae based on its small, globose ascomata, relatively undifferentiated peridium of small pseudoparenchymatic cells, and sparse pseudoparaphyses (Shearer and Crane 1999). However, the ventricose to clavate asci, cylindrical to fusoid ascospores with isthmoid at center do not fit with the familial concept of Phaeosphaeriaceae (Hyde et al. 2013). It is placed in Pleosporales genera incertae sedis (Wijayawardene et al. 2018, 2020), until its DNA data are obtained. One collection of Isthmosporella pulchra (A254-2), collected from the type locality by its author (Dr. Lee Crane), is illustrated here (Fig. 117).
List of freshwater Isthmosporella species
Isthmosporella pulchra Shearer & Crane, 91: 142 (1999); Fig. 117
Freshwater distribution: USA (Shearer and Crane 1999)
Rebentischia P. Karst., Fungi Fenniae Exsiccati, Fasc. 9: 881 (1869)
Saprobic on decaying wood in terrestrial or submerged wood in freshwater habitats. Sexual morph: Ascomata solitary or clustered, immersed or erumpent to superficial, uniloculate, globose to subglobose, somewhat depressed, or ovoid, sometimes collapsed in age, apex blunt, black, coriaceous, ostiolate. Peridium soft, fleshy, often roughened by protruding cells or short hyphae, composed of pseudoparenchymatous cells, light to dark vinaceous brown externally, compressed, hyaline or vinaceous-tinged cells inwardly, pigmented encrust on the surface of outermost cells. Pseudoparaphyses numerous, cellular, flexuous, narrow, hyaline, septate, branched, anastomosing, persistent. Asci 8-spored, bitunicate, fissitunicate, cylindric-clavate, short pedicellate, apically thickened. Ascospores biseriate, elongate-obovoid or narrowly clavate, rounded at the apex, base tapering to a hyaline appendage, uaually slightly curved, brownish to dark brown, transeptate, smooth, thin-walled (Barr 1980; Boonmee et al. 2014). Asexual morph: Coelomycetous. asteromella-like (Barr 1980).
Type species: Rebentischia pomiformis P. Karst.
Notes: Rebentischia, typified by R. pomiformis, is characterized by darkly pigmented ascomata, elongate-obovoid ascospores with a base tapering to a hyaline appendage (Boonmee et al. 2014). Barr (1980) placed Rebentischia in Tubeufiaceae based on these characters, which was accepted by Rossman (1987), Lumbsch and Huhndorf (2010) and Boonmee et al. (2011). However, Boonmee et al. (2014) placed it in Pleosporales incertae sedis based on the darkened ascospores with a setiform basal appendage after re-examination of the holotype of R. pomiformis. The asexual morph is unknown with certainty, but probably is asteromella-like fungi that grow near the base of ascomata (Barr 1980).
Fourteen species are listed in Index Fungorum (2020), all of which are old species without any sequence data. Barr (1980) thought that there are only two valid entities, viz. Rebentischia massalongoi (Mont.) Sacc. and R. unicaudata (Berk. & Broome) Sacc. von Arx and Muller (1975) synonymized the type species R. pomiformis with R. massalongi, which was accepted by Boonmee et al. (2014).
The freshwater species Rebentischia unicaudata fits well with the generic concept of Rebentischia by dark ascomata, clavate asci and narrowly obovoid ascospores with a hyaline basal cell (Barr 1980). It is similar to the type species, but differs in the habitats (freshwater vs. terrestrial) and ascospores size (17–25(–30) × 4–6(–7.5) µm vs. 28–40 × 6–10 µm) (Barr 1980).
List of freshwater Rebentischia species
Rebentischia unicaudata (Berk. & Broome) Sacc., Syll. fung. (Abellini) 2: 12 (1883)
Basionym: Sphaeria unicaudata Berk. & Broome, Ann. Mag. nat. Hist., Ser. 33: 373 (1859)
Freshwater distribution: USA (Shearer and Crane 1986)
Tubeufiales Boonmee & K.D. Hyde, Fungal Diversity 68(1): 245 (2014)
Tubeufiaceae was well-studied by Lu et al. (2018b) based on morphology and multigene phylogenetic analyses. We provide brief generic notes, list and key to freshwater Tubeufiales species. The generic descriptions mostly refers to Lu et al. (2018b).
Tubeufiaceae M.E. Barr, Mycologia 71(5): 948 (1979)
Key to freshwater helicosporous genera of Tubeufiaceae (found on natural substrate) (updated from Lu et al. ( 2018b ))
-
1.
Colonies dematiaceous………2
-
1.
Colonies hyaline………7
-
2.
Conidia subglobose or broadly elliptical………Pseudohelicoon
-
2.
Conidia not subglobose or broadly elliptical body………3
-
3.
Colonies pale yellow to yellow-green………Helicosporium
-
3.
Colonies pink, pale brown to dark brown………4
-
4.
Conidiophores arising from a pseudoparenchymatous stromata………Helicodochium
-
4.
Conidiophores arising from creeping hyphae………5
-
5.
Conidiophores < 50 μm long………Berkleasmium
-
5.
Conidiophores > 50 μm long………6
-
6.
Conidia with truncate basal cell and thickened lateral walls, dilute fuliginous………Helicotruncatum
-
6.
Conidia without truncate basal cell and thickened lateral walls, hyaline to brown………Helicoma
-
7.
Conidiophores 0–3-septate………8
-
7.
Conidiophores multi-septate………10
-
8.
Conidiophores pale brown, conidiogenous cells hyaline to pale brown………Dematiohelicomyces
-
8.
Conidiophores and conidiogenous cells hyaline………9
-
9.
Conidiogenous cells tapering towards the apex, inverted funnel at the apex, conidia not loose in water………Helicohyalinum
-
9.
Conidiogenous cells cylindrical, truncate at the apex, conidia loosely coiled in water………Helicomyces
-
10.
Conidiophores setiferous, brown to dark brown………Helicoarctatus
-
10.
Conidiophores not setiferous, hyaline to brown………11
-
11.
Conidiogenous cells cylindrical, with a truncate apex………12
-
11.
Conidiogenous cells cylindrical, denticulate………13
-
12.
Conidiophores hyaline, conidia helicoid………Helicotubeufia
-
12.
Conidiophores pale brown to brown, conidia variable in shape………Tubeufia
-
13.
Conidiophores hyaline to brown, mostly unbranched, > 110 μm long………Neohelicomyces
-
13.
Conidiophores pale brown to dark brown, irregular, 20–450 μm long………14
-
14.
Conidiophores branched, conidia mostly loosely coiled………Pseudohelicomyces
-
14.
Conidiophores occasionally branched, conidia tightly coiled………Neohelicosporium
Aquaphila Goh, K.D. Hyde & W.H. Ho, Mycol. Res. 102(5): 588 (1998)
Saprobic on submerged wood or fallen leaves. Description of this genus see Goh et al. (1998a), Boonmee et al. (2014) and Hyde et al. (2016b).
Type species: Aquaphila albicans Goh, K.D. Hyde & W.H. Ho
Notes: Aquaphila is characterized by translucent or pale yellowish, chalky white colonies, hyaline conidiophores arising singly from the procumbent hyphae, denticulate conidiogenous cells with sympodially proliferating and fusoid to sickle-shaped conidia (Goh et al. 1998a). Boonmee et al. (2014) linked Tubeufia asiana Sivichai & C.K.M. Tsui to the sexual morph of the type species A. albicans based on molecular data. Aquaphila formed a sister clade to Chlamydotubeufia Boonmee & K.D. Hyde (Lu et al. 2018b; this study, Fig. 129). Aquaphila albicans was only found from freshwater habitats (Goh et al. 1998a; Hyde et al. 2016b) and confirmed with molecular data by Hyde et al. (2016b) and this study.
List of freshwater Aquaphila species
*Aquaphila albicans Goh, K.D. Hyde & W.H. Ho, Mycol. Res. 102(5): 588 (1998); Fig. 118
Freshwater distribution: Australia (Goh et al. 1998a), Thailand (Hyde et al. 2016b; this study)
Saprobic on decaying wood submerged in freshwater. Sexual morph: Undetermined. Asexual morph: Colonies on natural substrate effuse, translucent, chalky white. Mycelium partly immersed in substrate, consisting of septate, branched, hyaline, smooth, thin-walled hyphae. Conidiophores up to 20 μm long, 3–6 μm wide, arising singly from procumbent hyphae, semi-macronematous, mononematous, flexuous, simple or branched, septate, hyaline, thin-walled, smooth. Conidiogenous cells mono- or poly-blastic, sympodial with cylindrical denticles with truncate ends, hyaline, with numerous integrated tiny pegs. Conidia 65–75 × 8–10.5 μm (\( {\bar{\text{x}}} \) = 68 × 9.5 μm, n = 15), acrogenous, solitary, mostly fusoid to sickle-shaped, sometimes sigmoid, slightly curved and acute at both ends, basal cell obconical, 10–13-euseptate, constricted at the septa, hyaline to pale yellowish, densely guttulate, smooth-walled.
Culture characteristics: On PDA, colony irregular, reaching 5 mm in 25 days at 25 °C, brown from above, dark brown from below, surface dry, rough, with sparse mycelium, mostly immersed in culture, with an irregular edge.
Material examined: THAILAND, Prachuap Khiri Khan Province, on submerged wood in a stream, 30 July 2015, K.D. Hyde, 147A (MFLU 15-2713), living culture MFLUCC 15-0995; Nakhon Si Thammarat Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat6109 (MFLU 18-1720), living culture KUMCC 19-0078.
Notes: Our two new collections MFLUCC 15-0995 and KUMCC 19-0078 were collected from submerged wood in Thailand, and are morphologically and phylogenetically identical to Aquaphila albicans (Goh et al. 1998a; Hyde et al. 2016b). Phylogenetic analysis supports our two collections to be A. albicans (Fig. 129).
Berkleasmium Zobel, Icon. fung. (Prague) 6: 4 (1854)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Lu et al. (2018b).
Type species: Berkleasmium concinnum (Berk.) S. Hughes
Notes: Berkleasmium is characterized by superficial ascomata seated on a subiculum, with multi-celled setae covering the whole ascomata, fusiform, multi-septate ascospores, and dictyoconidia or helicoid conidia (Lu et al. 2018b). The type species B. concinnum was linked to the asexual morph of Neoacanthostigma septoconstrictum (Promp. & A.N. Mill.) Boonmee & K.D. Hyde, based on phylogenetic evidence and co-occurrence of ascomata of N. septoconstrictum and sporodochia of B. concinnum (Tanney and Miller 2017). Berkleasmium comprises over 45 epithets in Index Fungorum (2020). However, Lu et al. (2018b) accepted six species based on phylogenetic evidence and their similar sexual morph features. Five species were reported from freshwater habitats (see list below) and four of them were transferred from Neoacanthostigma Boonmee et al. The sexual morph of B. aquaticum (Y.Z. Lu et al.) Y.Z. Lu has the typical ascomata of Berkleasmium (Lu et al. 2017b).
List of freshwater Berkleasmium species
*Berkleasmium aquaticum (Y.Z. Lu, Boonmee & K.D. Hyde) Y.Z. Lu, Fungal Diversity 92: 150 (2018)
Basionym: Neoacanthostigma aquaticum Y.Z. Lu, Boonmee & K.D. Hyde, Cryptog. Mycol. 38(2): 176 (2017)
Freshwater distribution: China (Lu et al. 2017b)
*Berkleasmium guangxiense (Y.Z. Lu, Boonmee & K.D. Hyde) Y.Z. Lu, Fungal Diversity 92: 150 (2018)
Basionym: Neoacanthostigma guangxiense Y.Z. Lu, Boonmee & K.D. Hyde, Cryptog. Mycol. 38(2): 182 (2017)
Freshwater distribution: China (Lu et al. 2017b)
*Berkleasmium latisporum (Y.Z. Lu, Boonmee & K.D. Hyde) Y.Z. Lu, Fungal Diversity 92: 152 (2018); Fig. 119
Basionym: Neoacanthostigma latisporum Y.Z. Lu, Boonmee & K.D. Hyde, Cryptog. Mycol. 38(2): 184 (2017)
Freshwater distribution: Thailand (Lu et al. 2017b; this study)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies effuse, brown. Mycelium mostly immersed, composed of branched, septate, brown hyphae. Conidiophores and Conidiogenous cells not observed. Conidia 85–150 μm diam. and conidial filament 5.5–21.5 μm wide (\( {\bar{\text{x}}} \) = 123 × 14 μm, n = 15), 545–865 μm long, coiled 2–3.5 times when tightly coiled, becoming loosely coiled in water, basal cell elongate, rounded at the tip, distinctly multi-septate, pale brown to dark brown, smooth-walled.
Culture characteristics: On PDA, colony irregular, reaching 7 mm in 20 days at 25 °C, dark brown to black from above, black from below, surface dry, rough, umbonate, veined and wrinkled, mycelium mostly immersed in culture, with an irregular edge.
Material examined: THAILAND, Prachuap Khiri Khan Province, on submerged wood in a stream, 30 July 2015, K.D. Hyde, 34C (MFLU 15-2686), living culture MFLUCC 15-0987.
Notes: Our collection MFLUCC 15-0987 clusters with Berkleasmium latisporum with high bootstrap support (Fig. 129). They have identical LSU and TEF sequence data, which indicates that they are conspecific (Jeewon and Hyde 2016). MFLUCC 15-0987 has larger conidial diam. (85–150 μm vs. 95–120 μm) and wider conidial filament (5.5–21.5 μm vs. 12–14.5 μm) than the holotype of B. latisporum (Lu et al. 2017b).
*Berkleasmium longisporum Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 150 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Berkleasmium thailandicum (Tanney & A.N. Mill.) Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 152 (2018)
Basionym: Neoacanthostigma thailandicum Tanney & A.N. Mill., IMA Fungus 8(1): 103 (2017)
Synonymy: Neoacanthostigma brunneisporum Y.Z. Lu, Boonmee & K.D. Hyde, Cryptog. Mycol. 38(2): 179 (2017)
Freshwater distribution: Thailand (Lu et al. 2017b)
Key to freshwater Berkleasmium species
-
1.
Conidiogenous cells mono- to poly-blastic………B. aquaticum
-
1.
Conidiogenous cells only monoblastic or polyblastic………2
-
2.
Conidiogenous cells monoblastic………3
-
2.
Conidiogenous cells polyblastic………4
-
3.
Conidial filament 11–15 μm wide………B. longisporum
-
3.
Conidial filament 9–11 μm wide………B. thailandicum
-
4.
Conidial filament 12–14.5 μm wide………B. latisporum
-
4.
Conidial filament 8–10 μm wide………B. guangxiense
Boerlagiomyces Butzin, Willdenowia 8(1): 39 (1977)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Boonmee et al. (2014).
Type species: Boerlagiomyces velutinus (Penz. & Sacc.) Butzin
Notes: Boerlagiomyces is characterized by superficial ascomata with sparse, hyphal appendages and muriform ascospores (Boonmee et al. 2014). Boerlagiomyces was placed in Tubeufiaceae based on a reference sequence of B. macrosporus V.G. Rao & Varghese (Doilom et al. 2017) and accepted by Lu et al. (2018b). The type species B. velutinus has eight ascospores (Boonmee et al. 2014), while three freshwater species, viz. B. grandisporus S.J. Stanley & K.D. Hyde, B. lacunosisporus (K.D. Hyde) S.J. Stanley & K.D. Hyde and B. websteri Shearer & J.L. Crane, mostly have two ascospores (Hyde 1992c; Shearer and Crane 1995; Stanley and Hyde 1997). The sequence data of above freshwater species are needed to confirm their phylogenetic placement.
List of freshwater Boerlagiomyces species
Boerlagiomyces grandisporus S.J. Stanley & K.D. Hyde, Mycol. Res. 101(5): 635 (1997)
Freshwater distribution: Philippines (Stanley and Hyde 1997)
Boerlagiomyces lacunosisporus (K.D. Hyde) S.J. Stanley & K.D. Hyde [as ‘lacunosispora’], Mycol. Res. 101(5): 640 (1997)
Basionym: Garethjonesia lacunosispora K.D. Hyde, Aust. Syst. Bot. 5(4): 411 (1992)
Freshwater distribution: Queensland, Australia (Hyde 1992c)
Boerlagiomyces websteri Shearer & J.L. Crane, Mycologia 87(6): 876 (1996) [1995]
Freshwater distribution: Illinois, USA (Shearer and Crane 1995)
Key to freshwater Boerlagiomyces species
-
1.
Asci 2(–3–4)-spored………B. lacunosisporus
-
1.
Asci 2-spored………2
-
2.
Ascospores 78–149 × 21–66 μm………B. grandisporus
-
2.
Ascospores 66–107 × 26–35 μm………B. websteri
Chlamydotubeufia Boonmee & K.D. Hyde, Fungal Diversity 51(1): 78 (2011)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Lu et al. (2018b).
Type species: Chlamydotubeufia huaikangplaensis Boonmee & K.D. Hyde
Notes: Chlamydotubeufia has globose ascomata, a helicosporous asexual morph and dictyochlamydospores (Boonmee et al. 2011). Eight epithets are listed in Index Fungorum (2020). Lu et al. (2018b) excluded three and accepted five species in Chlamydotubeufia based on multigene phylogenetic analysis. Four species are reported from freshwater habitats and all have a holomorph (Hyde et al. 2017; Lu et al. 2018b), except C. chlamydospora (Shearer) Boonmee & K.D. Hyde (Shearer 1987).
List of freshwater Chlamydotubeufia species
*Chlamydotubeufia chlamydospora (Shearer) Boonmee & K.D. Hyde [as ‘chlamydosporum’], Fungal Diversity 51(1): 83 (2011)
Basionym: Helicoma chlamydosporum Shearer, Mycologia 79(3): 468 (1987)
Freshwater distribution: Panama (Shearer 1987)
*Chlamydotubeufia cylindrica Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 92: 155 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Chlamydotubeufia huaikangplaensis Boonmee & K.D. Hyde, Fungal Diversity 51(1): 78 (2011)
Freshwater distribution: Thailand (Hyde et al. 2017)
*Chlamydotubeufia krabiensis Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 87: 116 (2017)
Freshwater distribution: Thailand (Hyde et al. 2017)
Key to freshwater Chlamydotubeufia species
-
1.
Asexual morph………C. chlamydospora
-
1.
Holomorph………2
-
2.
Asci < 90 μm long………C. huaikangplaensis
-
2.
Asci > 90 μm long………3
-
3.
Asci 90–145 × 14–16 μm………C. krabiensis
-
3.
Asci 90–110 × 15–18 μm………C. cylindrica
Dematiohelicomyces Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 92: 159 (2018)
Saprobic on submerged wood. Description of this genus see Lu et al. (2018b).
Type species: Dematiohelicomyces helicosporus (Boonmee, Y.Z. Lu & K.D. Hyde) Y.Z. Lu
Notes: The monotypic genus Dematiohelicomyces was introduced for a known species Chlamydotubeufia helicospora Boonmee et al. based on morphology and phylogeny (Lu et al. 2018b). Dematiohelicomyces is similar to Helicomyces Link by short conidiophores and helicoid conidia with a spathulate basal end cell, but differs in having brown conidiophores (Lu et al. 2018b). Dematiohelicomyces helicosporus is exclusively recorded from freshwater habitats (Hyde et al. 2016b; Lu et al. 2018b).
List of freshwater Dematiohelicomyces species
*Dematiohelicomyces helicosporus (Boonmee, Y.Z. Lu & K.D. Hyde) Y.Z. Lu, Fungal Diversity 92: 159 (2018)
Basionym: Chlamydotubeufia helicospora Boonmee, Y.Z. Lu & K.D. Hyde, Fungal Diversity 80: 123 (2016)
Freshwater distribution: Thailand (Hyde et al. 2016b; Lu et al. 2018b)
Dictyospora Brahaman., Y.Z. Lu, Boonmee & K.D. Hyde, Mycosphere 8(7): 924 (2017)
Saprobic on submerged wood. Description of this genus see Brahmanage et al. (2017).
Type species: Dictyospora thailandica Brahaman., Y.Z. Lu, Boonmee & K.D. Hyde
Notes: The monotypic genus Dictyospora was introduced for a freshwater species D. thailandica (Brahmanage et al. 2017), which was later recollected by Lu et al. (2018b) and characterized by larger ascomata, smaller asci and shorter ascospores than the holotype. Dictyospora has dictyochlamydospores which are similar to Chlamydotubeufia, but phylogeny separates them as distinct genera (Brahmanage et al. 2017; Lu et al. 2018b).
List of freshwater Dictyospora species
*Dictyospora thailandica Brahaman., Y.Z. Lu, Boonmee & K.D. Hyde, Mycosphere 8(7): 924 (2017)
Freshwater distribution: Thailand (Brahmanage et al. 2017; Lu et al. 2018b)
Helicoarctatus Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 165 (2018)
Saprobic on submerged wood. Description of this genus see Lu et al. (2018b).
Type species: Helicoarctatus aquaticus Y.Z. Lu, J.C. Kang & K.D. Hyde
Notes: The monotypic genus Helicoarctatus is characterized by setiform conidiophores, discrete conidiogenous cells arising laterally from lower portion of the conidiophores, with each bearing 1–2 tiny conidiogenous loci, which are similar to Helicosporium Nees (Lu et al. 2018b). Helicoarctatus differs from Helicosporium by larger conidia and molecular characters (Lu et al. 2018b). The type species H. aquaticus formed a sister clade with a sexual morphic species Neohelicoma fagacearum (Boonmee & K.D. Hyde) Y.Z. Lu with high bootstrap support (Lu et al. 2018b). Helicoarctatus aquaticus and N. fagacearum are separated as distinct genera based on phylogenetic analysis (Lu et al. 2018b).
List of freshwater Helicoarctatus species
*Helicoarctatus aquaticus Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 166 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
Helicodochium J.S. Monteiro, R.F. Castañeda, A.C. Cruz & Gusmão, Mycotaxon 127: 6 (2014)
Saprobic on submerged wood. Description of this genus see Lu et al. (2018b).
Type species: Helicodochium amazonicum J.S. Monteiro et al.
Notes: Helicodochium was introduced by Monteiro et al. (2014) and characterized by sporodochial, apothecium-like, pinkish to pink conidiomata with macronematous conidiophores arising from a thick-walled, pseudoparenchymatous stromata, and hyaline to pink conidia (Monteiro et al. 2014; Lu et al. 2018b). Lu et al. (2018b) transferred Helicodochium from Ascomycota genera incertae sedis to Tubeufiaceae based on morphology and phylogeny, together with a new species H. aquaticum Y.Z. Lu et al. The type species H. amazonicum lacks sequence data in Genbank.
List of freshwater Helicodochium species
Helicodochium amazonicum J.S. Monteiro, R.F. Castañeda, A.C. Cruz & Gusmão, Mycotaxon 127: 6 (2014)
Freshwater distribution: Brazil (Monteiro et al. 2014)
*Helicodochium aquaticum Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 92: 168 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
Key to freshwater Helicodochium species
-
1.
Conidia 70–82.5 μm diam.………H. amazonicum
-
1.
Conidia 42–60 μm diam.………H. aquaticum
Helicohyalinum Y.Z. Lu, J.K. Liu & K.D. Hyde, Fungal Diversity 92: 168 (2018)
Saprobic on submerged wood. Description of this genus see Lu et al. (2018b).
Type species: Helicohyalinum infundibulum Y.Z. Lu, J.K. Liu & K.D. Hyde
Notes: Helicohyalinum differs from other helicosporous genera by its flexuous, hyaline conidiophores with the terminal, monoblastic conidiogenous cells tapering towards the apex (Lu et al. 2018b). Two freshwater species, H. aquaticum (Brahaman. et al.) J.K. Liu and H. infundibulum Y.Z. Lu et al., were collected from Thailand (Brahmanage et al. 2017; Lu et al. 2018b). They can be distinguished by conidial size and coiling characters (conidia tightly coiled which are not loose in water in H. infundibulum vs. conidia loosely coiled or uncoiled in water in H. aquaticum).
List of freshwater Helicohyalinum species
*Helicohyalinum aquaticum (Brahaman., Y.Z. Lu, Boonmee & K.D. Hyde) J.K. Liu, Fungal Diversity 92: 170 (2018)
Basionym: Chlamydotubeufia aquatica Brahaman., Y.Z. Lu, Boonmee & K.D. Hyde, Mycosphere 8(7): 922 (2017)
Freshwater distribution: Thailand (Brahmanage et al. 2017)
*Helicohyalinum infundibulum Y.Z. Lu, J.K. Liu & K.D. Hyde, Fungal Diversity 92: 170 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
Key to freshwater Helicohyalinum species
-
1.
Conidia 62–89 μm diam.………H. aquaticum
-
1.
Conidia 40–50 μm diam.………H. infundibulum
Helicoma Corda, Icon. fung. (Prague) 1: 15 (1837)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Lu et al. (2018b).
Type species: Helicoma muelleri Corda
Notes: Helicoma is an old genus comprising over 90 epithets in Index Fungorum (2020). Most Helicoma species lack molecular data and thus were considered to be probably misidentified (Lu et al. 2018b). The sexual morphs were reported by Boonmee et al. (2014). Based on new collections and molecular data, Lu et al. (2018b) redefined generic concept of Helicoma as conidiogenous cells that are intercalary, cylindrical, with denticles, arising laterally from the lower portion of conidiophores as tooth-like protrusions, and conidia are pleurogenous, helicoid, hygroscopic, tapering towards apex and rounded at tip, coiled 1.5–5 times, becoming loosely coiled in water. Lu et al. (2018b) accepted 57 species in Helicoma and eight of them were found from freshwater habitats. The molecular data of H. gigasporum (C.K.M. Tsui et al.) Y.Z. Lu are needed to confirm its placement in Helicoma.
List of freshwater Helicoma species
*Helicoma aquaticum Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 174 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
Helicoma gigasporum (C.K.M. Tsui, Goh, K.D. Hyde & Hodgkiss) Y.Z. Lu, Fungal Diversity 92: 187 (2018)
Basionym: Helicosporium gigasporum C.K.M. Tsui, Goh, K.D. Hyde & Hodgkiss, Mycologia 90(2): 392 (1998)
Freshwater distribution: Hong Kong, China (Tsui et al. 2001a)
*Helicoma guttulatum Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 80: 125 (2016)
Freshwater distribution: Thailand (Hyde et al. 2016b)
*Helicoma hongkongense (C.K.M. Tsui, Goh, K.D. Hyde & Hodgkiss) Y.Z. Lu, Fungal Diversity 92: 187 (2018)
Basionym: Helicosporium hongkongense C.K.M. Tsui, Goh, K.D. Hyde & Hodgkiss, Mycologia 90(2): 392 (1998)
Freshwater distribution: Hong Kong, China (Tsui et al. 2001a), Thailand (Lu et al. 2018b)
*Helicoma longisporum Y.Z. Lu, J.K. Liu & K.D. Hyde, Fungal Diversity 92: 178 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Helicoma multiseptatum Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 180 (2018)
Freshwater distribution: China (Lu et al. 2018b)
*Helicoma nematosporum (Linder) Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 189 (2018)
Basionym: Helicosporium nematosporum Linder, Ann. Mo. bot. Gdn 16: 288 (1929)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Helicoma septoconstrictum Y.Z. Lu, J.K. Liu & K.D. Hyde, Fungal Diversity 92: 185 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
Key to freshwater Helicoma species
-
1.
Conidiogenous cells monoblastic………2
-
1.
Conidiogenous cells mono- to polyblastic………5
-
2.
Conidia > 80 μm diam.………H. septoconstrictum
-
2.
Conidia < 80 μm diam.………3
-
3.
Conidia < 50 μm diam.………H. hongkongense
-
3.
Conidia > 50 μm diam.………4
-
4.
Conidia hyaline to pale brown, coiled 1–2 times………H. multiseptatum
-
4.
Conidia pale yellow or pale brown, coiled 2–2.5 times………H. gigasporum
-
5.
Conidia > 45 μm diam.………H. longisporum
-
5.
Conidia < 45 μm diam.………6
-
6.
Conidia < 30 μm diam.………H. guttulatum
-
6.
Conidia > 30 μm diam.………7
-
7.
Conidia 310–490 μm long………H. nematosporum
-
7.
Conidia 220–320 μm long………H. aquaticum
Helicomyces Link, Mag. Gesell. naturf. Freunde, Berlin 3(1-2): 21 (1809)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Lu et al. (2018b).
Type species: Helicomyces roseus Link
Notes: The type species Helicomyces roseus is phylogenetically confused, because two isolates (BCC 3381 and BCC 8808) were transferred to Tubeufia Penz. & Sacc., five isolates of Luo et al. (2017) were transferred to Pseudohelicomyces Y.Z. Lu et al., and one isolate (CBS 283.51) of Tsui et al. (2006b) is misidentified (Lu et al. 2018b). Although the sequence data of H. roseus is lacking, Lu et al. (2018b) named the clade comprising four freshwater species (see list below) as Helicomyces sensu stricto. The epitype or reference specimen of H. roseus is needed to confirm the conclusion of Lu et al. (2018b).
List of freshwater Helicomyces species
*Helicomyces chiayiensis (C.H. Kuo & Goh) Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 205 (2018)
Basionym: Helicoma chiayiense C.H. Kuo & Goh, Mycol. Progr. 17(5): 561 (2018)
Freshwater distribution: Taiwan, China (Kuo and Goh 2018)
*Helicomyces colligatus R.T. Moore, Mycologia 46(1): 89 (1954)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Helicomyces hyalosporus Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 201 (2018)
Freshwater distribution: China (Lu et al. 2018b)
Helicomyces roseus Link, Mag. Gesell. naturf. Freunde, Berlin 3(1-2): 21 (1809)
Freshwater distribution: Australia (Hyde and Goh 1997), Brunei (Ho et al. 2001), Hong Kong, China (Ho et al. 2001, 2002), Malaysia (Ho et al. 2001)
*Helicomyces torquatus L.C. Lane & Shearer, Mycotaxon 19: 291 (1984)
Freshwater distribution: Malaysia (Ho et al. 2001), Panama (Lane and Shearer 1984), Thailand (Lu et al. 2018b)
Key to freshwater Helicomyces species
-
1.
Conidiogenous cells monoblastic………H. torquatus
-
1.
Conidiogenous cells mono- to poly-blastic………2
-
2.
Conidia > 70 μm diam.………H. hyalosporus
-
2.
Conidia < 70 μm diam.………3
-
3.
Conidia < 50 μm diam.………H. chiayiensis
-
3.
Conidia > 50 μm diam.………4
-
4.
Conidia 50–70 μm diam., conidial filament 7–11 μm wide………H. colligatus
-
4.
Conidia 25–60 μm diam., conidial filament 2.5–6 μm wide………H. roseus
Helicosporium Nees, Syst. Pilze (Würzburg): 68 (1816) [1816-17]
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Lu et al. (2018b).
Type species: Helicosporium vegetum Nees
Notes: Helicosporium is an old genus comprising over 100 epithets in Index Fungorum (2020). The generic concept of Helicosporium was redefined by Linder (1929) and Goos (1989) and recently reviewed by Lu et al. (2018b) who gave the latest update with additional collections and multigene phylogenetic analysis. Helicosporium setiferum Y.Z. Lu et al. was introduced by Lu et al. (2018b) to accommodate five freshwater isolates. The isolates BCC 3332 and BCC 8125 provided by Tsui et al. (2006b) lack morphological data, but phylogeny identified them as H. setiferum (Lu et al. 2018b). Thirteen species were accepted in Helicosporium (Lu et al. 2018b) and five of them were reported from freshwater habitats in Thailand. We report a new freshwater species H. thailandense which is collected from Thailand.
List of freshwater Helicosporium species
*Helicosporium aquaticum Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 208 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Helicosporium flavisporum Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 210 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Helicosporium flavum Brahaman., Y.Z. Lu, Boonmee & K.D. Hyde, Mycosphere 8(7): 931 (2017)
Freshwater distribution: Thailand (Brahmanage et al. 2017)
*Helicosporium setiferum Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 213 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Helicosporium thailandense H. Zhang, W. Dong & K.D. Hyde, sp. nov.
Index Fungorum number: IF557940; Facesoffungi number: FoF09285; Fig. 120
Etymology: referring to Thailand, where the holotype was collected
Holotype: MFLU 18-1561
Saprobic on decaying, submerged wood in freshwater. Sexual morph: Undetermined. Asexual morph: Colonies superficial, effuse, gregarious, yellow-green. Mycelium partly immersed in natural substratum, branched, hyaline to pale brown. Conidiophores 450–550 × 2.8–4.5 µm (\( {\bar{\text{x}}} \) = 500 × 3.5 µm, n = 5), macronematous, mononematous, sparsely branched, slender, cylindrical, smooth-walled, brown, septate, slightly constricted at septa, thin-walled. Conidiogenous cells 17–25 × 2.5–4.7 µm (\( {\bar{\text{x}}} \) = 20 × 3.5 µm, n = 15), denticulate, holoblastic, mono- to polyblastic, integrated, terminal or intercalary, sympodial, arising laterally from lower portion of the conidiophores as tiny tooth-like protrusions, with each bearing 1–6 tiny conidiogenous loci, 1.2–2.2 × 1–1.5 µm (\( {\bar{\text{x}}} \) = 1.8 × 1 µm, n = 10), brown, smooth-walled. Conidia solitary, dry, pleurogenous, helicoid, tapering at tip, 22–28 µm diam. and conidial filament 2.6–3.8 µm wide (\( {\bar{\text{x}}} \) = 25 × 3.2 µm, n = 10), 110–125 µm long, loosely coiled 1.75–2.25 times, indistinctly septate, 8–10-septate, guttulate, hyaline, sometimes slightly light yellow, smooth-walled.
Culture characteristics: On PDA, colony circular, reaching 5 mm in 10 days at 25 °C, brown from above, dark brown from below, surface rough, with dense mycelium, dry, edge entire.
Material examined: THAILAND, Satun Province, on submerged wood in a stream, 10 May 2018, W. Dong, hat282-1 (MFLU 18-1561, holotype), ex-type living culture MFLUCC 18-1407; ibid., hat282-2 (HKAS 105051, isotype), ex-type living culture KUMCC 19-0071.
Notes: Helicosporium thailandense clusters with a terrestrial species H. viridiflavum Y.Z. Lu et al. with high bootstrap support (Fig. 129). Helicosporium thailandense is similar to H. viridiflavum in having yellow-green colonies and long conidiophores (Lu et al. 2018b). However, they can be distinguished by the conidiophore length (450–550 × 2.8–4.5 µm vs. 250–425 × 3–4 µm), conidial diameter (22–28 µm vs. 20–23 µm) and septation (8–10 vs. 13–16). Phylogenetic analysis supports them to be different species (Fig. 129).
*Helicosporium vesicarium Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 213 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
Key to freshwater Helicosporium species
-
1.
Conidiophores < 65 μm long………H. flavum
-
1.
Conidiophores > 65 μm long………2
-
2.
Conidia < 90 μm long………H. aquaticum
-
2.
Conidia > 90 μm long………3
-
3.
Conidiophores < 120 μm long………H. vesicarium
-
3.
Conidiophores > 120 μm long………4
-
4.
Conidiophores > 450 μm long………H. thailandense
-
4.
Conidiophores < 450 μm long………5
-
5.
Conidiophores 125–320 μm, conidia 13–21 μm diam.………H. setiferum
-
5.
Conidiophores 130–180 μm, conidia 12–15 μm diam.………H. flavisporum
Helicotruncatum Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 220 (2018)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Lu et al. (2018b).
Type species: Helicotruncatum palmigenum (Penz. & Sacc.) Y.Z. Lu & K.D. Hyde
Notes: Helicotruncatum was introduced by Lu et al. (2018b) based on ITS and LSU sequence data of Helicoma palmigenum (Penz. & Sacc.) Linder NBRC 32663 (Tsui et al. 2006b) and previous literatures (Linder 1929; Matsushima 1971; Goos 1986). The thickened lateral wall of the conidiophores and conidia of Helicotruncatum are distinct and represents a generic feature in Tubeufiaceae (Lu et al. 2018b). Although the molecular characters of NBRC 32663 warrant a distinct genus, the morphology was not provided (Tsui et al. 2006b). Helicotruncatum palmigenum commonly occurrs in terrestrial habitats, and herein we report it from freshwater habitats.
List of freshwater Helicotruncatum species
*Helicotruncatum palmigenum (Penz. & Sacc.) Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 220 (2018); Fig. 121
Basionym: Helicosporium intermedium var. palmigenum Penz. & Sacc., Malpighia 15(7-9): 249 (1902) [1901]
Synonymy: Helicoma palmigenum (Penz. & Sacc.) Linder, Ann. Mo. bot. Gdn 16: 306 (1929)
Freshwater distribution: Thailand (this study)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies superficial, effuse, erect, gregarious, black. Mycelium composed of partly immersed, pale brown to brown, septate hyphae. Conidiophores 180–310 × 5–6 µm (\( {\bar{\text{x}}} \) = 250 × 5 µm, n = 10), macronematous, mononematous, unbranched, erect, cylindrical, robust at the base, ca 10 µm diam., smooth-walled, pale brown to brown at the upper part, dark brown to black near the base, septate, slightly constricted at septa, uneven pigmented, pale brown near the septa, thin-walled. Conidiogenous cells 17–25 × 5–6 µm (\( {\bar{\text{x}}} \) = 22 × 6 µm, n = 10), holoblastic, monoblastic, integrated, determinate, terminal, subcylindrical, pale brown, smooth-walled, with broad, flat point of conidial attachment. Conidia solitary, dry, acrogenous, helicoid, truncate at tip, 30–40 µm diam. and conidial filament 10–15 µm wide (\( {\bar{\text{x}}} \) = 35 × 13 µm, n = 10), 50–60 µm long, tightly coiled 1.5–1.75 times, distinctly 12–14-septate, guttulate, pale brown when young, becoming dark brown or grey-brown when old, the basal cell truncate with thickened lateral walls, smooth-walled.
Culture characteristics: On PDA, colony irregular, reaching 20 mm in 18 days at 25 °C, dark brown from above and below, surface rough, with sparse mycelium, dry, umbonate, edge undulate to filiform.
Material examined: THAILAND, Prachuap Khiri Khan Province, on submerged wood in a stream, 30 July 2015, K.D. Hyde, 143B (MFLU 15-2715), living culture MFLUCC 15-0993.
Notes: Our new collection clusters with Helicotruncatum palmigenum (NBRC 32663) with high bootstrap support (Fig. 129). Although NBRC 32663 is named as H. palmigenum, the morphology has not been determined (Tsui et al. 2006b). Information on the holotype of H. palmigenum is unavailable.
Our collection MFLUCC 15-0993 has similar characters with specimens reported in Linder (1929), Matsushima (1971) and Goos (1986). However, conidia of MFLUCC 15-0993 have more septa (12–14 vs. 10–12) and wider conidial filaments (10–15 µm vs. 11–12 µm) than in Linder (1929), and longer conidiophores (180–310 µm vs. 60–140 µm) than in Matsushima (1971). MFLUCC 15-0993 has similar conidial size with Goos (1986), but has longer conidiophores (180–310 µm vs. 60–215 µm). The length of conidiophores in Linder (1929) is not given.
Comparing nucleotides between NBRC 32663 and MFLUCC 15-0993, there are two nucleotide differences crossing 549 base pairs in LSU sequence data, while nine nucleotide differences (including three deletions and three insertions) in ITS sequence data. We name MFLUCC 15-0993 as Helicotruncatum palmigenum mainly based on the molecular evidence (Tsui et al. 2006b), coupled with similar morphological characters in previous publications (Linder 1929; Matsushima 1971; Goos 1986). Epitypification of H. palmigenum is needed using a collection from its type locality, Indonesia, to confirm the previous studies (Linder 1929; Matsushima 1971; Goos 1986; Tsui et al. 2006b) and our study. This is a new habitat and geographical record for H. palmigenum from freshwater in Thailand.
Helicotubeufia Y.Z. Lu & J.K. Liu, Mycosphere 9(3): 500 (2018)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see (Liu et al. 2018a).
Type species: Helicotubeufia guangxiensis Y.Z. Lu & J.K. Liu
Notes: Helicotubeufia was introduced by Liu et al. (2018a) to accommodate two freshwater species H. guangxiensis and H. jonesii Y.Z. Lu & J.K. Liu, and one terrestrial species H. hydei Y.Z. Lu & J.K. Liu. Helicotubeufia has dark brown to black ascomata seated on a subiculum, cylindrical asci, fusiform, multiseptate ascospores and helicosporous asexual morphs (Liu et al. 2018a). Both sexual and asexual morphs of H. guangxiensis were found on submerged wood in nature. The asexual morph of H. jonesii is unknown.
List of freshwater Helicotubeufia species
*Helicotubeufia guangxiensis Y.Z. Lu & J.K. Liu, Mycosphere 9(3): 500 (2018)
Freshwater distribution: China (Liu et al. 2018a)
*Helicotubeufia jonesii Y.Z. Lu & J.K. Liu, Mycosphere 9(3): 503 (2018)
Freshwater distribution: China (Liu et al. 2018a)
Key to freshwater Helicotubeufia species
-
1.
Ascospores 55–70 × 5–6 μm………H. guangxiensis
-
1.
Ascospores 35–43 (–47) × 4.5–7 μm………H. jonesii
Muripulchra Z.L. Luo, H.Y. Su & K.D. Hyde, Cryptog. Mycol. 38(1): 36 (2017)
Saprobic on submerged wood. Description of this genus see Luo et al. (2017).
Type species: Muripulchra aquatica Z.L. Luo, H.Y. Su & K.D. Hyde
Notes: The monotypic genus Muripulchra was introduced by Luo et al. (2017) for a freshwater species M. aquatica, which is distinct in Tubeufiaceae in producing micronematous conidiophores, obpyriform, muriform, dark brown, thick-walled, granulate conidia.
List of freshwater Muripulchra species
*Muripulchra aquatica Z.L. Luo, H.Y. Su & K.D. Hyde, Cryptog. Mycol. 38(1): 39 (2017)
Freshwater distribution: China (Luo et al. 2017)
Neochlamydotubeufia Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 92: 221 (2018)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Lu et al. (2018b).
Type species: Neochlamydotubeufia fusiformis Y.Z. Lu, Boonmee & K.D. Hyde
Notes: Neochlamydotubeufia was introduced with sexual and asexual morphs which are characterized by superficial ascomata with tapering, unbranched, thick-walled setae and fusiform, multi-septate, hyaline to pale brown ascospores and broadly oval to ellipsoid chlamydospores (Lu et al. 2018b). These characters are similar to Chlamydotubeufia and Dictyospora, but phylogeny separates them as different genera (Boonmee et al. 2011; Brahmanage et al. 2017; Lu et al. 2018b). The sexual and asexual morphs of N. fusiformis were separately collected from natural submerged wood and linked with molecular evidence (Lu et al. 2018b). Neochlamydotubeufia khunkornensis (Boonmee & K.D. Hyde) Y.Z. Lu was collected from dead wood in terrestrial habitats and formed asexual morph in MEA (Boonmee et al. 2011). Lu et al. (2018b) found chlamydospores of N. khunkornensis from submerged wood. Neochlamydotubeufia fusiformis has smaller ascomata than N. khunkornensis and they are separated by molecular data (Lu et al. 2018b).
List of freshwater Neochlamydotubeufia species
*Neochlamydotubeufia fusiformis Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 92: 221 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Neochlamydotubeufia khunkornensis (Boonmee & K.D. Hyde) Y.Z. Lu, Fungal Diversity 92: 222 (2018)
Basionym: Chlamydotubeufia khunkornensis Boonmee & K.D. Hyde, Fungal Diversity 51(1): 80 (2011)
Freshwater distribution: Thailand (Lu et al. 2018b)
Key to freshwater Neochlamydotubeufia species
-
1.
Ascomata 140–180 × 140–170 μm………N. fusiformis
-
1.
Ascomata 180–250 × 200–250 μm………N. khunkornensis
Neohelicomyces Z.L. Luo, Bhat & K.D. Hyde, Cryptog. Mycol. 38(1): 39 (2017)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Luo et al. (2017) and and Lu et al. (2018b).
Type species: Neohelicomyces aquaticus Z.L. Luo, Bhat & K.D. Hyde
Notes: Neohelicomyces was introduced by Luo et al. (2017) for three freshwater species. Lu et al. (2018b) introduced the fourth freshwater species N. hyalosporus Y.Z. Lu et al. which differs from the others in having longer conidiophores and hyaline conidia. Neohelicomyces is characterized by white colonies, macronematous, branched conidiophores, mono- to poly-blastic, integrated conidiogenous cells with lateral minute denticles and helicoid conidia (Luo et al. 2017). Two strains Tubeufia amazonensis Samuels et al. (ATCC 42524) and T. helicomyces Höhn. (MUCL 15702) cluster in Neohelicomyces (Lu et al. 2018b; this study, Fig. 129), but are not synonymized because they lack morphology (Tsui et al. 2006b). We introduce another two freshwater Neohelicomyces species collected from Thailand and China.
List of freshwater Neohelicomyces species
*Neohelicomyces aquaticus Z.L. Luo, Bhat & K.D. Hyde, Cryptog. Mycol. 38(1): 40 (2017)
Freshwater distribution: China (Luo et al. 2017)
*Neohelicomyces dehongensis H. Zhang, W. Dong & K.D. Hyde, sp. nov.
Index Fungorum number: IF557941; Facesoffungi number: FoF09286; Fig. 122
Etymology: referring to Dehong, where the holotype was collected
Holotype: MFLU 18-1168
Saprobic on decaying, submerged wood in freshwater. Sexual morph: Undetermined. Asexual morph: Colonies superficial, effuse, gregarious, white. Mycelium composed of partly immersed, partly superficial, hyaline to pale brown, septate, branched hyphae, with mass of crowded, glistening conidia. Conidiophores 120–250 × 3.3–3.9 µm (\( {\bar{\text{x}}} \) = 180 × 3.5 µm, n = 10), macronematous, mononematous, unbranched or loosely branched, branches often forked close to the base, upper part frequently sterile, erect, cylindrical, pale brown, septate, slightly constricted at septa, guttulate, smooth-walled, thin-walled. Conidiogenous cells 12–17.5 × 3–4 µm (\( {\bar{\text{x}}} \) = 14.5 × 3.5 µm, n = 20), holoblastic, mono- to polyblastic, integrated, sympodial, intercalary, cylindrical, with denticles, hyaline to pale brown, smooth-walled. Conidia solitary, dry, pleurogenous, helicoid, rounded at tip, 20–25 µm diam. and conidial filament 2.2–4 µm wide (\( {\bar{\text{x}}} \) = 22 × 3 µm, n = 15), 145–210 µm long, tightly coiled 2.75–3.75 times, becoming loosely coiled in water, indistinctly multi-septate, guttulate, hyaline, smooth-walled.
Culture characteristics: On PDA, colony circular, reaching 5 mm in 25 days at 25 °C, brown from above and below, surface rough, with dense mycelium, dry, edge entire.
Material examined: CHINA, Yunnan Province, Dehong, on submerged wood in a stream, 25 November 2017, G.N. Wang, H3C-1 (MFLU 18-1168, holotype), ex-type living culture MFLUCC 18-1029; ibid., H3C-2 (HKAS 101728, isotype), ex-type living culture KUMCC 18-0078.
Notes: Neohelicomyces dehongensis clusters with three strains of N. pallidus (Ces.) Y.Z. Lu & K.D. Hyde (Fig. 129). Neohelicomyces dehongensis differs from N. pallidus in having larger conidia (20–25 µm diam. vs. 10–16 μm diam.) and wider conidial filament (2.2–4 µm vs. 1–2 µm) (Linder 1929; Zhao et al. 2007). Neohelicomyces pallidus (UAMH 10535) clusters in the same clade with N. pandanicola Tibpromma & K.D. Hyde, which is apart from the other three strains of N. pallidus. This indicates that N. pallidus UAMH 10535 is a distinct species. However, we do not change its status as there is a lack of morphology.
*Neohelicomyces grandisporus Z.L. Luo, Boonmee & K.D. Hyde, Cryptog. Mycol. 38(1): 44 (2017)
Freshwater distribution: China (Luo et al. 2017)
*Neohelicomyces hyalosporus Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 225 (2018)
Freshwater distribution: China (Lu et al. 2018b)
*Neohelicomyces submersus Z.L. Luo, H.Y. Su & K.D. Hyde, Cryptog. Mycol. 38(1): 40 (2017)
Freshwater distribution: China (Luo et al. 2017)
*Neohelicomyces thailandicus H. Zhang, W. Dong & K.D. Hyde, sp. nov.
Index Fungorum number: IF557942; Facesoffungi number: FoF09287; Fig. 123
Etymology: referring to Thailand, where the holotype was collected
Holotype: MFLU 11-1079
Saprobic on decaying, submerged wood in freshwater. Sexual morph: Undetermined. Asexual morph: Colonies superficial, effuse, gregarious, white. Mycelium mostly immersed in natural substratum, sparsely branched, hyaline to pale brown. Conidiophores 300–400 × 2.8–4.6 µm (\( {\bar{\text{x}}} \) = 345 × 3.6 µm, n = 5), macronematous, mononematous, sparsely branched, erect, slender, uneven in width, cylindrical, smooth-walled, brown to pale brown, septate, slightly constricted at septa, thin-walled. Conidiogenous cells 8–11 × 2–3.5 µm (\( {\bar{\text{x}}} \) = 9.7 × 2.8 µm, n = 10), holoblastic, mono- to polyblastic, discrete, determinate, arising in a whorl from pale brown, ampulliform-like or subcylindrical cells or directly from conidiophores near every septum, with each bearing 1–4 tiny conidiogenous loci, hyaline to pale brown, smooth-walled. Conidia solitary, dry, pleurogenous, helicoid, rounded at tip, 14–18 µm diam. and conidial filament 1.3–1.8 µm wide (\( {\bar{\text{x}}} \) = 15.5 × 1.6 µm, n = 10), 120–145 µm long, tightly coiled 3.75–4.25 times, indistinctly multi-septate, guttulate, hyaline, smooth-walled.
Culture characteristics: On PDA, colony circular, reaching 5 mm in 10 days at 25 °C, brown from above and below, surface rough, with dense mycelium, dry, edge entire.
Material examined: THAILAND, Chiang Rai Province, on submerged wood in a stream, 18 January 2010, H. Zhang, a47 (MFLU 11-1079, holotype), ex-type living culture MFLUCC 11-0005.
Notes: Neohelicomyces thailandicus clusters in Neohelicomyces with high bootstrap support (Fig. 129). It can be distinguished from the other species by its conidiogenous cells arising from ampulliform-like or subcylindrical cells and conidiophores near the septa, with each bearing 1–4 tiny conidiogenous loci (Luo et al. 2017; Lu et al. 2018b; Tibpromma et al. 2018; Crous et al. 2019).
Key to freshwater Neohelicomyces species
-
1.
Conidiophores < 170 μm long………N. grandisporus
-
1.
Conidiophores > 170 μm long………2
-
2.
Conidia hyaline………3
-
2.
Conidia pale brown………5
-
3.
Conidia > 20 μm diam.………N. dehongensis
-
3.
Conidia < 20 μm diam.………4
-
4.
Conidia pleurogenous………N. thailandicus
-
4.
Conidia acropleurogenous………N. hyalosporus
-
5.
Conidiophores 240.5–335.5 μm, conidia coiled 2–2.5 times………N. aquaticus
-
5.
Conidiophores 172–285 μm, conidia coiled 3–3.5 times………N. submersus
Neohelicosporium Y.Z. Lu, J.C. Kang & K.D. Hyde, Mycol. Progr. 17(5): 637 (2017), [7] (2017)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Lu et al. (2018a).
Type species: Neohelicosporium parvisporum Y.Z. Lu, J.C. Kang & K.D. Hyde
Notes: Neohelicosporium was introduced by Lu et al. (2018a) for five freshwater species. Neohelicosporium differs from Helicosporium by its integrated, sympodial conidiogenous cells and acrogenous and/or acropleurogenous conidia (Lu et al. 2018b). Based on phylogeny and morphology, Lu et al. (2018b) transferred some species of Helicoma, Helicosporium and Tubeufia to Neohelicosporium. Two strains HKUCC 10235 and CBS 189.95 were temporarily named as Neohelicosporium sp. until new collections with molecular data are obtained (Lu et al. 2018b). All freshwater species were found from China and Thailand (see list below). Neohelicosporium ellipsoideum Y.Z. Lu et al. is the only freshwater species producing holomorph and N. irregulare Y.Z. Lu et al. is unique in producing two lengths of conidiophores (Lu et al. 2018b). Neohelicosporium species are variable in types of conidiophores and the size of conidia and conidiophores.
List of freshwater Neohelicosporium species
*Neohelicosporium acrogenisporum Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 228 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Neohelicosporium aquaticum Y.Z. Lu, J.C. Kang & K.D. Hyde, Mycol. Progr. 17(5): 639 (2017), [9] (2017)
Freshwater distribution: China (Lu et al. 2018a)
*Neohelicosporium astrictum Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 230 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Neohelicosporium ellipsoideum Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 230 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Neohelicosporium guangxiense Y.Z. Lu, J.C. Kang & K.D. Hyde, Mycol. Progr. 17(5): 639 (2017), [9] (2017)
Freshwater distribution: China (Lu et al. 2018a)
*Neohelicosporium hyalosporum Y.Z. Lu, J.C. Kang & K.D. Hyde, Mycol. Progr. 17(5): 639 (2017), [11] (2017)
Freshwater distribution: China (Lu et al. 2018a)
*Neohelicosporium irregulare Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 235 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Neohelicosporium krabiense Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 236 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Neohelicosporium parvisporum Y.Z. Lu, J.C. Kang & K.D. Hyde, Mycol. Progr. 17(5): 637 (2017)
Freshwater distribution: China (Lu et al. 2018a)
*Neohelicosporium submersum H. Zhang, W. Dong & K.D. Hyde, sp. nov.
Index Fungorum number: IF557943; Facesoffungi number: FoF09288; Fig. 124
Etymology: in reference to the submerged habitats of the fungus
Holotype: MFLU 17-1734
Saprobic on decaying, submerged wood in freshwater. Sexual morph: Undetermined. Asexual morph: Colonies superficial, effuse, gregarious, white. Mycelium composed of partly immersed, partly superficial, hyaline to pale brown, septate hyphae, with mass of crowded conidia. Conidiophores long or short, uneven in width, 50–260 × 4–5.5 µm (\( {\bar{\text{x}}} \) = 147 × 4.9 µm, n = 10), macronematous, mononematous, unbranched, erect, cylindrical, tapering at tip, pale brown, septate, slightly constricted at septa, smooth-walled, thin-walled. Conidiogenous cells 13–17 × 4–5.5 µm (\( {\bar{\text{x}}} \) = 15 × 4.8 µm, n = 5), holoblastic, mono- to polyblastic, integrated, determinate or sympodial, mostly intercalary or rarely terminal, cylindrical, with tiny tooth-like protrusions, mostly bearing one, rarely two tiny conidiogenous loci, 4 × 1.5 µm, pale brown, smooth-walled, loosely arranged. Conidia solitary, dry, mostly pleurogenous or rarely acrogenous, helicoid, rounded at tip, 47–52 µm diam. when tightly coiled, 55–70 µm diam. when loosely coiled, and conidial filament 3–5 µm wide (\( {\bar{\text{x}}} \) = 50 × 4 µm, n = 5), 340–400 µm long, tightly coiled 3–3.25 times, multi-septate, guttulate, hyaline, smooth-walled.
Culture characteristics: On PDA, colony circular, reaching 60 mm in 60 days at 25 °C, black from above and below, surface rough, with sparse mycelium, dry, edge entire. Mycelium mostly immersed, dark brown, septate, smooth.
Material examined: THAILAND, Phang Nga Province, on submerged wood in a stream, 1 September 2017, X.D. Yu, v7 (MFLU 17-1734, holotype), ex-type living culture MFLUCC 17-2376.
Notes: Neohelicosporium submersum clusters with two unnamed Neohelicosporium spp. (HKUCC 10235 and CBS 189.95) (Fig. 129). Our isolate MFLUCC 17-2376 is identical to HKUCC 10235 and CBS 189.95 based on available sequences (LSU of HKUCC 10235 and ITS, LSU, SSU of CBS 189.95). We introduce N. submersum, but do not include these two strains because their morphological data and some molecular data are lacking. Neohelicosporium submersum differs from another phylogenetically related species N. krabiense by longer conidiophores (50–260 × 4–5.5 µm vs. 45–140 × 5–6.5 µm) and larger conidia (47–52 µm diam., 340–400 µm long vs. 30–40 µm diam., 230–320 µm long).
*Neohelicosporium taiwanense (C.H. Kuo & Goh) Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 246 (2018)
Basionym: Helicosporium taiwanense C.H. Kuo & Goh, Mycol. Progr. 17(5): 563 (2018)
Freshwater distribution: Taiwan, China (Kuo and Goh 2018)
*Neohelicosporium thailandicum Y.Z. Lu, J.C. Kang & K.D. Hyde, Mycol. Progr. 17(5): 641 (2017), [11] (2017)
Freshwater distribution: Thailand (Lu et al. 2018a)
Key to freshwater Neohelicosporium species
-
1.
Conidiophores micronematous………2
-
1.
Conidiophores macronematous………4
-
2.
Conidia > 25 μm diam.………N. hyalosporum
-
2.
Conidia < 25 μm diam.………3
-
3.
Conidiophores up to 420 μm long………N. parvisporum
-
3.
Conidiophores 50–280 μm long………N. astrictum
-
4.
Conidiophores two different ranges of length………N. irregulare
-
4.
Conidiophores only one range of length………5
-
5.
Conidiophores up to 74 μm long………N. thailandicum
-
5.
Conidiophores > 75 μm long………6
-
6.
Holomorph………N. ellipsoideum
-
6.
Asexual morph………7
-
7.
Conidia < 32 μm diam.………N. aquaticum
-
7.
Conidia > 32 μm diam.………8
-
8.
Conidial filament > 5.5 μm wide………N. acrogenisporum
-
8.
Conidial filament < 5.5 μm wide………9
-
9.
Maximum length of conidiophores < 150 μm long………N. krabiense
-
9.
Maximum length of conidiophores > 150 μm long………10
-
10.
Conidiogenous cells 10.5–16.5 μm long………N. guangxiense
-
10.
Conidiogenous cells 2.2−3.7 μm long………N. taiwanense
Neotubeufia Chaiwan, Boonmee, Y.Z. Lu & K.D. Hyde, Mycosphere 8(9): 1149 (2017)
Saprobic on submerged wood. Description of this genus see Chaiwan et al. (2017).
Type species: Neotubeufia krabiensis Chaiwan, Boonmee, Y.Z. Lu & K.D. Hyde
Notes: The monotypic genus Neotubeufia was introduced by Chaiwan et al. (2017) for a freshwater sexual species N. krabiensis producing superficial, glabrous ascomata, cylindrical asci and fasciculate ascospores. Neotubeufia formed a distinct clade in Tubeufiaceae (Chaiwan et al. 2017; Lu et al. 2018b).
List of freshwater Neotubeufia species
*Neotubeufia krabiensis Chaiwan, Boonmee, Y.Z. Lu & K.D. Hyde, Mycosphere 8(9): 1149 (2017)
Freshwater distribution: Thailand (Chaiwan et al. 2017)
Pseudohelicomyces Y.Z. Lu, J.K. Liu & K.D. Hyde, Fungal Diversity 92: 248 (2018)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Lu et al. (2018b).
Type species: Pseudohelicomyces talbotii (Goos) Y.Z. Lu & K.D. Hyde
Notes: Pseudohelicomyces was proposed by Valenzuela and Garnica (2000) with P. albus Garnica & E. Valenz. as the type species. Lu et al. (2018b) formally introduced this genus to accommodate two new species and three new combinations based on morphology and multigene phylogenetic analyses, and designed P. talbotii as the type. We follow Jayasiri et al. (2019) and conserve Pseudohelicomyces Y.Z. Lu, J.K. Liu & K.D. Hyde (Tubeufiaceae) against Pseudohelicomyces Garnica & Valenz. (Hymenogastraceae).
Three species of Pseudohelicomyces were found from freshwater habitats, viz. P. aquaticus Y.Z. Lu et al., P. hyalosporus Y.Z. Lu et al. and P. talbotii. Pseudohelicomyces hyalosporus was formerly named as Helicomyces roseus that comprises six isolates, of which five (Luo et al. 2017) are from freshwater habitats and the other (CBS 283.51) from terrestrial habitats was wrongly identified (Tsui et al. 2006b). The specimen HKAS 83995 of Luo et al. (2017) was designated as the holotype of P. hyalosporus by Lu et al. (2018b). Pseudohelicomyces talbotii was found from freshwater habitats by Lu et al. (2018b), with LSU, ITS, TEF and RPB2 sequence data.
List of freshwater Pseudohelicomyces species
*Pseudohelicomyces aquaticus Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 92: 250 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Pseudohelicomyces hyalosporus Y.Z. Lu, J.K. Liu & K.D. Hyde, Fungal Diversity 92: 251 (2018)
Freshwater distribution: China (Luo et al. 2017)
*Pseudohelicomyces talbotii (Goos) Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 252 (2018)
Basionym: Helicosporium talbotii Goos, Mycologia 81(3): 368 (1989)
Freshwater distribution: Thailand (Lu et al. 2018b)
Key to freshwater Pseudohelicomyces species
-
1.
Conidiophores micronematous, conidiogenous cells monoblastic………P. hyalosporus
-
1.
Conidiophores macronematous, conidiogenous cells mono- to polyblastic, sympodial………2
-
2.
Conidia coiled 2.5–3.5 times………P. aquaticus
-
2.
Conidia coiled 1.5–2.5 times………P. talbotii
Pseudohelicoon Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 254 (2018)
Saprobic on submerged wood. Description of this genus see Lu et al. (2018b).
Type species: Pseudohelicoon subglobosum (Goh & C.H. Kuo) Y.Z. Lu & K.D. Hyde
Basionym: Helicoon subglobosum Goh & C.H. Kuo [as ‘Helicoön’], Phytotaxa 346(2): 145 (2018)
Notes: Pseudohelicoon is characterized by dark brown, glistening colonies, short branched conidiophores, determinate conidiogenous cells and helicoid conidia that are tightly coiled 7–13 times to form a subglobose or broadly elliptical body, usually incorporating with mucilaginous substances (Lu et al. 2018b). The type species P. subglobosum was transferred from Helicoon to avoid further taxonomic confusion as the polyphyletic nature of Helicoon (Tsui and Berbee 2006; Goh and Kuo 2018; Lu et al. 2018b). Two freshwater species are accepted in Pseudohelicoon and formed a well-supported clade in Tubeufiaceae (Lu et al. 2018b). They can be separated by the conidial shape and length (Goh and Kuo 2018).
List of freshwater Pseudohelicoon species
*Pseudohelicoon gigantisporum (Goh & K.D. Hyde) Y.Z. Lu & J.K. Liu, Fungal Diversity 92: 254 (2018)
Basionym: Helicoon gigantisporum Goh & K.D. Hyde, Mycol. Res. 100(12): 1487 (1996)
Freshwater distribution: Australia (Goh and Hyde 1996)
*Pseudohelicoon subglobosum (Goh & C.H. Kuo) Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 255 (2018)
Basionym: Helicoon subglobosum Goh & C.H. Kuo [as ‘Helicoön’], Phytotaxa 346(2): 145 (2018)
Freshwater distribution: Taiwan, China (Goh and Kuo 2018)
Key to freshwater Pseudohelicoon species
-
1.
Conidia broadly ellipsoidal, 78−123 μm long………P. gigantisporum
-
1.
Conidia subglobose, 66−78 μm long………P. subglobosum
Thaxteriellopsis Sivan., Panwar & S.J. Kaur, Kavaka 4: 39 (1977) [1976]
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Lu et al. (2018b).
Type species: Thaxteriellopsis lignicola Sivan., Panwar & S.J. Kaur
Notes: Boonmee et al. (2011) resurrected Thaxteriellopsis based on morphology and phylogeny, and designated an epitype for the type species, T. lignicola. The sexual and asexual morphs of T. lignicola were described by Boonmee et al. (2011) based on an epitype specimen and ex-epitype culture. Doilom et al. (2017) reported its asexual morph from decaying inner surface of bark of Tectona grandis based on molecular evidence. Lu et al. (2018b) found another collection of this species from submerged wood in freshwater habitats and gave an updated description of sexual and asexual morphs.
List of freshwater Thaxteriellopsis species
*Thaxteriellopsis lignicola Sivan., Panwar & S.J. Kaur, Kavaka 4: 39 (1977) [1976]
Freshwater distribution: Thailand (Lu et al. 2018b)
Tubeufia Penz. & Sacc., Malpighia 11(11–12): 517 (1898) [1897]
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see (Lu et al. 2018b).
Type species: Tubeufia javanica Penz. & Sacc.
Notes: Tubeufia is an old genus comprising over 80 epithets in Index Fungorum (2020). After reassessment of Tubeufiales, Lu et al. (2018b) accepted 50 species and excluded T. helicomyces Höhn. based on multigene phylogeny and morphology. Both sexual and asexual morphs of Tubeufia have various morphology as detailed in Lu et al. (2018b). Tubeufia species are rather difficult to identify without molecular data (Lu et al. 2018b). Recently, 17 new species and six new combinations were added to the genus (Lu et al. 2018b). Tubeufia is one of the largest freshwater dothideomycetous genera comprising 29 freshwater species (see list below). Most species were confirmed in Tubeufia with molecular data, except T. claspisphaeria Kodsueb and T. sympodiophora (Matsush.) Y.Z. Lu & K.D. Hyde. We provide a key to freshwater Tubeufia species, which have been studied well with molecular data.
List of freshwater Tubeufia species
*Tubeufia abundata Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 259 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Tubeufia aquatica Z.L. Luo, Bhat & K.D. Hyde, Cryptog. Mycol. 38(1): 44 (2017); Fig. 125
Freshwater distribution: China (Luo et al. 2017), Thailand (Lu et al. 2018b; this study)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies on natural substratum superficial, effuse, gregarious, white. Mycelium composed of partly immersed, hyaline to pale brown, septate, abundantly branched hyphae, with masses of crowded, glistening conidia. Conidiophores 30–60 × 5–6 μm (\( {\bar{\text{x}}} \) = 48.5 × 5.5 µm, n = 10), macronematous, mononematous, straight or slightly curved, cylindrical, unbranched, 2–5-septate, brown at the base, gradually paler upwards, sometimes swollen at the base, smooth-walled. Conidiogenous cells 9.5–16 × 4–5 µm (\( {\bar{\text{x}}} \) = 12.5 × 4 µm, n = 10), holoblastic, polyblastic, integrated, sympodial, terminal, subcylindrical or irregular, truncate at the apex after conidial secession, denticulate, pale brown, smooth-walled. Conidia solitary, acrogenous or acropleurogenous, helicoid, rounded at the tip, 23–26 μm diam. and conidial filament 3–5 μm wide (\( {\bar{\text{x}}} \) = 25.5 × 3.8 μm, n = 10), 100–165 μm long, coiled 2.25–3.5 times, distinctly multi-septate, guttulate, hyaline, smooth-walled.
Culture characteristics: On PDA, colony circular, reaching 10 mm in 22 days at 25 °C, dark brown from above and below, surface rough, with sparse superficial mycelium, most mycelium immersed in culture, dry, edge entire.
Material examined: THAILAND, Prachuap Khiri Khan Province, on submerged wood in a stream, 30 July 2015, K.D. Hyde, 143A (MFLU 15-2712), living culture MFLUCC 15-0990.
Notes: Our new collection MFLUCC 15-0990 clusters in the same clade with three freshwater strains of Tubeufia aquatica with high bootstrap support, which indicates that they are the same species (Fig. 129). Tubeufia aquatica have been collected from submerged wood in China and Thailand (Luo et al. 2017; Lu et al. 2018b). They have very similar morphological characters, except that the collection of Lu et al. (2018b) has less septa (0–1-septate) of conidiophores than the holotype (> 4-septate) in Luo et al. (2017) and our new collection (2–5-septate). We identify our new collection MFLUCC 15-0990 as T. aquatica based on morphology and phylogenetic analysis (Fig. 129).
*Tubeufia brevis Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 263 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Tubeufia brunnea Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 265 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Tubeufia chlamydospora Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 92: 266 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
Tubeufia claspisphaeria Kodsueb, Mycologia 96(3): 668 (2004)
Freshwater distribution: Hong Kong, China (Kodsueb et al. 2004)
*Tubeufia cylindrothecia (Seaver) Höhn., Sber. Akad. Wiss. Wien, Math.-naturw. Kl., Abt. 1 128(7–8): 562 (1919); Figs. 126, 127
Basionym: Ophionectria cylindrothecia Seaver, Mycologia 1(2): 70 (1909)
Freshwater distribution: China (Luo et al. 2017), Thailand (Lu et al. 2018b; this study)
Saprobic on decaying wood in terrestrial and freshwater habitats. Sexual morph: Undetermined. Asexual morph: Colonies superficial, effuse, gregarious, white to pale brown. Mycelium composed of partly immersed, hyaline to pale brown, septate, sparsely branched hyphae, with masses of conidia. Conidiophores 60–140 × 3–5 μm (\( {\bar{\text{x}}} \) = 108 × 3.8 µm, n = 10), macronematous, mononematous, cylindrical, septate, branched or unbranched, erect, flexuous, pale brown to brown, smooth-walled. Conidiogenous cells 10.5–18 × 3.5–4 μm (\( {\bar{\text{x}}} \) = 15.5 × 3.8 µm, n = 5), holoblastic, mono- to poly-blastic, integrated, terminal, smooth, truncate at the apex after conidial secession, each with single or several conidia. Conidia solitary, acrogenous, helicoid, rounded at tip, 24.5–28 μm diam. and conidial filament 3–4.2 μm wide (\( {\bar{\text{x}}} \) = 26 × 3.6 μm, n = 10), 100–210 μm long, coiled 2.75–3.25 times, indistinctly multi-septate, guttulate, hyaline to pale brown, smooth-walled.
Culture characteristics: On PDA, colony irregular, dark brown to black from above and below, surface rough, with dense superficial or immersed mycelium, most mycelium immersed in medium, dry, edge undulate.
Material examined: THAILAND, Chiang Mai Province, on submerged wood in a stream, 29 November 2010, H. Zhang, d6 (MFLU 11-0969), living culture MFLUCC 10-0919; ibid., d29 (MFLU 11-1107), living culture MFLUCC 11-0076.
Notes: Our two new collections MFLUCC 10-0919 and MFLUCC 11-0076 are identified as Tubeufia cylindrothecia based on the identical ITS and LSU sequence data to the ex-type strain of T. cylindrothecia, and phylogenetic analysis (Fig. 128). The asexual morph of T. cylindrothecia was first reported by Luo et al. (2017) and later encountered by Lu et al. (2018b) from freshwater habitats. Our freshwater collections have longer conidiophores (60–140 μm vs. 50–81 μm) and shorter conidia (100–210 μm vs. 256–314 μm) than the holotype (Luo et al. 2017). Additionally, we found polyblastic conidiogenous cells in MFLU 11-0969, while they are only monoblastic in the holotype (Luo et al. 2017).
*Tubeufia dictyospora Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 92: 271 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Tubeufia eccentrica Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 271 (2018)
Freshwater distribution: China (Lu et al. 2018b)
*Tubeufia fangchengensis Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 273 (2018)
Freshwater distribution: China (Lu et al. 2018b)
*Tubeufia filiformis Y.Z. Lu, Boonmee & K.D. Hyde, Mycol. Progr. 16(4): 407 (2017)
Freshwater distribution: Thailand (Lu et al. 2017a, 2018b)
*Tubeufia geniculata (C.H. Kuo & Goh) Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 297 (2018)
Basionym: Helicomyces geniculatus C.H. Kuo & Goh, Mycoscience 59(5): 436 (2018)
Freshwater distribution: Taiwan, China (Lu et al. 2018b)
*Tubeufia guangxiensis Chaiwan, Boonmee, Y.Z. Lu & K.D. Hyde, Mycosphere 8(9): 1150 (2017)
Freshwater distribution: China (Chaiwan et al. 2017; Lu et al. 2018b)
*Tubeufia hechiensis Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 274 (2018)
Freshwater distribution: China (Lu et al. 2018b)
*Tubeufia hyalospora Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 80: 126 (2016)
Freshwater distribution: Thailand (Hyde et al. 2016b)
*Tubeufia inaequalis Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 278 (2018)
Freshwater distribution: China (Lu et al. 2018b), Thailand (Lu et al. 2018b)
*Tubeufia krabiensis Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 92: 279 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Tubeufia latispora Y.Z. Lu, Boonmee & K.D. Hyde, Mycol. Progr. 16(4): 409 (2017)
Freshwater distribution: Thailand (Lu et al. 2017a)
*Tubeufia laxispora Y.Z. Lu, Boonmee & K.D. Hyde, Mycol. Progr. 16(4): 409 (2017)
Freshwater distribution: Thailand (Lu et al. 2017a, 2018b)
*Tubeufia mackenziei Y.Z. Lu, Boonmee & K.D. Hyde, Mycol. Progr. 16(4): 411 (2017)
Freshwater distribution: Thailand (Lu et al. 2017a)
*Tubeufia parvispora Tibpromma & K.D. Hyde, Fungal Diversity 93: 74 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Tubeufia rubra Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 285 (2018)
Freshwater distribution: China (Lu et al. 2018b)
*Tubeufia sympodihylospora Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 289 (2018)
Freshwater distribution: China (Lu et al. 2018b)
*Tubeufia sympodilaxispora Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 289 (2018)
Freshwater distribution: China (Lu et al. 2018b)
Tubeufia sympodiophora (Matsush.) Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 299 (2018)
Basionym: Helicoma sympodiophorum Matsush. [as ‘sympodiophora’], Matsush. Mycol. Mem. 7: 52 (1993)
Freshwater distribution: Hong Kong, China (Ho et al. 2002)
*Tubeufia taiwanensis Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 291 (2018)
Freshwater distribution: Taiwan, China (Lu et al. 2018b)
*Tubeufia tectonae Doilom & K.D. Hyde, Fungal Diversity 82: 150 (2017); Fig. 128
Synonymy: Tubeufia roseohelicospora Y.Z. Lu, Boonmee & K.D. Hyde, Fungal Diversity 80: 128 (2016)
Freshwater distribution: Thailand (Hyde et al. 2016b; Lu et al. 2018b; this study)
Saprobic on submerged wood. Sexual morph: Undetermined. Asexual morph: Colonies on natural substratum superficial, effuse, gregarious, hyaline to white. Mycelium composed of partly immersed, hyaline to pale brown, septate hyphae, with masses of crowded, glistening conidia. Conidiophores 40–60 × 5–7 μm, macronematous, mononematous, erect, cylindrical, unbranched, septate, brown, smooth-walled. Conidiogenous cells 15–20 × 4–5.5 µm, holoblastic, polyblastic, integrated, sympodial, terminal or intercalary, subcylindrical, denticulate, brown, smooth-walled. Conidia solitary, acrogenous or acropleurogenous, helicoid, rounded at tip, 80–130 μm diam. and conidial filament 3.5–6.5 μm wide (\( {\bar{\text{x}}} \) = 105 × 5 μm, n = 10), 370–450 μm long, coiled 1.25–2 times, becoming loosely coiled or uncoiled in water, indistinctly multi-septate, guttulate, hyaline, smooth-walled.
Culture characteristics: On PDA, colony circular, reaching 30 mm in 20 days at 25 °C, grey to brown from above and below, surface rough, with sparse superficial mycelium, most mycelium immersed in culture, dry, edge undulate.
Material examined: THAILAND, Prachuap Khiri Khan Province, on submerged wood in a stream, 30 July 2015, K.D. Hyde, 34D (MFLU 15-2696), living culture MFLUCC 15-0974.
Notes: Tubeufia tectonae was initially collected from bark of Tectona grandis and characterized by subhyaline to white colonies, mostly loosely coiled conidia (Doilom et al. 2017). Later, a new freshwater species T. roseohelicospora Y.Z. Lu et al. was introduced based on light pink colonies, tightly coiled conidia and wider conidial filaments (Hyde et al. 2016b). Lu et al. (2018b) found another two isolates of T. roseohelicospora and two isolates of T. tectonae from freshwater habitats, with additional TEF sequence data. However, all isolates of the two species, including our new collection MFLU 15-2696, do not show phylogenetic difference in the phylogenetic tree (Lu et al. 2018b; this study, Fig. 129). Furthermore, they have nearly identical TEF sequence data which indicates that they are conspecific. We, therefore, synonymize T. roseohelicospora with T. tectonae.
*Tubeufia tratensis Y.Z. Lu, J.C. Kang & K.D. Hyde, Fungal Diversity 92: 295 (2018)
Freshwater distribution: Thailand (Lu et al. 2018b)
*Tubeufia xylophila (P.N. Singh & S.K. Singh) Y.Z. Lu & K.D. Hyde, Fungal Diversity 92: 299 (2018)
Basionym: Helicosporium xylophilum P.N. Singh & S.K. Singh [as ‘xylophilous’], Curr. Res. Envir. & App. Myc. 6(4): 251 (2016)
Freshwater distribution: China (Lu et al. 2018b)
Key to freshwater Tubeufia species
-
1.
Holomorph known………2
-
1.
Holomorph unknown………4
-
2.
Conidial length > 400 μm………T. guangxiensis
-
2.
Conidial length < 400 μm………3
-
3.
Conidia > 330 μm long………T. filiformis
-
3.
Conidia < 330 μm long………T. cylindrothecia
-
4.
Sexual morph………T. latispora
-
4.
Asexual morph………5
-
5.
Conidia non-helicoid………6
-
5.
Conidia helicoid………7
-
6.
Conidia produce chlamydospores, form small globose to subglobose secondary conidia………T. chlamydospora
-
6.
Conidia produce dictyospores, lack secondary conidia………T. dictyospora
-
7.
Conidiogenous cells of two types………8
-
7.
Conidiogenous cells of one type………9
-
8.
Conidia < 40 μm diam.………T. abundata
-
8.
Conidia > 40 μm diam.………T. tectonae
-
9.
Colonies often with stalked sclerotia………10
-
9.
Colonies without stalked sclerotia………11
-
10.
Setae absent………T. taiwanensis
-
10.
Setae present………T. geniculata
-
11.
Colonies red-brown when dried………T. rubra
-
11.
Colonies hyaline to white or pale brown………12
-
12.
Conidiophores unbranched………13
-
12.
Conidiophores branched………17
-
13.
Conidiogenous cells sympodial………14
-
13.
Conidiogenous cells determinate………15
-
14.
Conidiogenous cells truncate at the apex………T. xylophila
-
14.
Conidiogenous cells denticulate………T. aquatica
-
15.
Conidiogenous cells polyblastic, denticulate………T. mackenziei
-
15.
Conidiogenous cells monoblastic, each with single conidium………16
-
16.
Conidia 17.5–40 μm diam., 111–182 μm long………T. laxispora
-
16.
Conidia 16–33 μm diam., 110–225 μm long………T. hyalospora
-
17.
Colonies brown………T. brunnea
-
17.
Colonies hyaline to white or pale brown………18
-
18.
Conidiophores up to 210 μm long………T. hechiensis
-
18.
Conidiophores < 140 μm long………19
-
19.
Conidia < 20 μm diam.………T. parvispora
-
19.
Conidia > 20 μm diam.………20
-
20.
Conidiophores mostly > 300 μm long………21
-
20.
Conidiophores mostly < 300 μm long………25
-
21.
Conidiophores 400–570 μm long………T. eccentrica
-
21.
Conidiophores < 480 μm long………22
-
22.
Conidia 38–45 μm diam.………T. brevis
-
22.
Conidia > 45 μm diam.………23
-
23.
Conidia 310–370 μm long………T. sympodihylospora
-
23.
Conidia up to 480 μm long………24
-
24.
Conidiophores 33–86 μm long………T. inaequalis
-
24.
Conidiophores 25–45 μm long………T. sympodilaxispora
-
25.
Conidia > 260 μm long, 260–305 μm………T. tratensis
-
25.
Conidia < 260 μm long………26
-
26.
Conidiogenous cells intercalary or terminal, 7–13 μm long………T. fangchengensis
-
26.
Conidiogenous cells terminal, 8.5–21 μm long………T. krabiensis
Wiesneriomycetaceae Suetrong, Rungjind., Somrith. & E.B.G. Jones, Phytotaxa 176(1): 288 (2014)
Wiesneriomyces Koord., Verh. K. Akad. Wet., tweede sect. 13(4): 246 (1907)
Saprobic on decaying wood in freshwater or terrestrial habitats. Description of this genus see Suetrong et al. (2014).
Type species: Wiesneriomyces laurinus (Tassi) P.M. Kirk
Notes: Wiesneriomyces has sporodochial conidiomata on a dark pseudoparenchymatous stalk, with subulate setae and cylindrical, hyaline, aseptate, catenate conidia (Suetrong et al. 2014). Wiesneriomyces formed a well-supported clade basal to Tubeufiaceae in Tubeufiales based on molecular data (Suetrong et al. 2014). Three species are accepted in Wiesneriomyces and W. conjunctosporus Kuthub. & Nawawi is found from freshwater habitats (Kuthubutheen and Nawawi 1988), but not confirmed with molecular data.
List of freshwater Wiesneriomyces species
*Wiesneriomyces conjunctosporus Kuthub. & Nawawi, Trans. Br. mycol. Soc. 90(4): 619 (1988)
Freshwater distribution: Malaysia (Kuthubutheen and Nawawi 1988)
Dothideomycetes families incertae sedis
Argynnaceae Shearer & J.L. Crane, Trans. Br. mycol. Soc. 75(2): 193 (1980)
Lepidopterella Shearer & J.L. Crane, Trans. Br. mycol. Soc. 75(2): 194 (1980)
Saprobic on submerged twigs. Sexual morph: Ascomata slightly immersed to superficial, solitary, globose to subglobose, dark brown to black, lacking ostioles. Peridium pseudoparenchymatic, composed of several layers of brown to black cells. Pseudoparaphyses numerous or sparse, cellular, hyaline, septate, branched. Asci 8-spored, bitunicate, subglobose to globose, pedicellate, lacking an ocular chamber, thick-walled. Ascospores overlapping, irregularly arranged, papilionaceous, brown to orange-brown, 1-septate, constricted and darker at the septum, smooth-walled (Shearer and Crane 1980). Asexual morph: Undetermined.
Type species: Lepidopterella palustris Shearer & J.L. Crane
Notes: Lepidopterella, typified by L. palustris, was placed in Argynnaceae together with the type genus Argynna Morgan based on the papilionaceous ascospores (Shearer and Crane 1980). Lepidopterella probably does not belong to Argynnaceae because of the different ascomata. Lepidopterella possesses globose to subglobose ascomata and brown to orange-brown ascospores, while Argynna has discal apothecia and pale brown ascospores with a dark band at the septum (Shearer and Crane 1980; Raja and Shearer 2008; Hyde et al. 2013). Phylogenetic analyses showed L. palustris did not form strong relationships with any families and orders in Dothideomycetes (Shearer et al. 2009; Peter et al. 2016). Lepidopterella is retained in Argynnaceae (Hyde et al. 2013), which is accepted by Wijayawardene et al. (2018, 2020). Two species are accepted in Lepidopterella and both of them are from freshwater habitats. They can be distinguished by ascospore morphology and size (see key below).
List of freshwater Lepidopterella species
*Lepidopterella palustris Shearer & J.L. Crane, Trans. Br. mycol. Soc. 75(2): 194 (1980); Fig. 130
Freshwater distribution: USA (Shearer and Crane 1980; Raja et al. 2009b)
*Lepidopterella tangerina Raja & Shearer, Mycologia 100(3): 481 (2008)
Freshwater distribution: USA (Raja and Shearer 2008; Raja et al. 2009b)
Key to freshwater Lepidopterella species
-
1.
Ascospores papilionaceous, 15.6–22.8 µm × 25–30 µm………L. palustris
-
1.
Ascospores broadly reniform, 16–19 µm × 30–35 µm………L. tangerina
Pseudorobillardaceae Crous, Fungal Systematics and Evolution 3: 108 (2019)
Pseudorobillarda M. Morelet, Bull. Soc. Sci. nat. Arch. Toulon et du Var 175: 5 (1968)
Saprobic on decaying plant materials in terrestrial and freshwater habitats. Sexual morph: Undetermined. Asexual morph: Pycnidia solitary, scattered or gregarious, immersed, uniloculate, ellipsoidal, glabrous, dark brown to black, ostiolate. Periduim composed of several layers of cells of textura angularis or textura prismatica, darker in the outer layers, paler in the inner layers. Conidiophores sparsely septate and branched at the base, or reduced to conidiogenous cells. Pseudoparaphyses present or absent, cellular. Conidiogenous cells discrete or integrated, cuboid, short-cylindrical, subcylindrical, ampulliform, or lageniform, colourless, smooth. Conidia fusiform, subcylindrical, ellipsoid, naviculate, unicellular or euseptate, hyaline, smooth, bearing attenuated, divergent appendages (Nag Raj 1993).
Type species: Pseudorobillarda phragmitis (Cunnell) M. Morelet
Notes: Pseudorobillarda is a coelomycetous genus, characterized by hyaline conidia with divergent appendages (Nag Raj 1993). The placement of Pseudorobillarda is unstable as it either clustered with Pleosporales (Rungjindamai et al. 2012), or nested between Tubeufiales and Mytilinidiales (Tangthirasunun et al. 2014). Recently, it was placed in a newly established family Pseudorobillardaceae which resides in Minutisphaerales (Crous et al. 2018a, 2019b). However, Pseudorobillardaceae was shown to not belong to Minutisphaerales in our phylogenetic tree (Fig. 2), and therefore placed in Dothideomycetes families incertae sedis.
The freshwater species Pseudorobillarda sojae Uecker & Kulik was transferred to Stauronematopsis Abbas et al. based on re-examination of an isotype (IMI 1298796) (Abbas et al. 2002). However, P. sojae (BCC 20495, NTCL090) formed a well-supported, monophyletic clade with other Pseudorobillarda species (Rungjindamai et al. 2012; Tangthirasunun et al. 2014; Crous et al. 2018a; this study, Fig. 2). We place P. sojae in Pseudorobillarda.
List of freshwater Pseudorobillarda species
*Pseudorobillarda sojae Uecker & Kulik, Mycologia 78: 450 (1986)
Synonymy: Stauronematopsis sojae (Uecker & Kulik) Abbas, B. Sutton & Ghaffar, Pakist. J. Bot. 34: 123 (2002)
Freshwater distribution: Thailand (Plaingam et al. 2005)
Dothideomycetes genera incertae sedis
Alascospora Raja, Violi & Shearer, Mycologia 102(1): 33 (2010)
Saprobic on submerged, decomposed petioles. Sexual morph: Ascomata scattered, partly immersed to superficial, uniloculate, globose, subglobose or hemispherical and flattened at the base, translucent to light brown when young, darkening with age, membranous, ostiolate. Peridium composed of hyaline to brown pseudoparenchymatic cells, dark amorphous material irregularly arranged on the surface. Pseudoparaphyses sparse, celular, broadly filamentous, sometimes irregular, hyaline, septate. Asci 8-spored, bitunicate, fissitunicate, globose to subglobose, thick-walled, short pedicellate. Ascospores overlapping irregularly arranged, ellipsoidal, straight, hyaline when young, brown at maturity, 1-septate, septum becoming thicker and darker in older ascospores, asymmetrical, upper cell longer and wider than lower cell, with a gelatinous sheath; sheath often condenses on ascospores to give a verruculose appearance (Raja et al. 2010b). Asexual morph: Undetermined.
Type species: Alascospora evergladensis Raja, Violi & Shearer
Notes: Alascospora evergladensis was isolated from submerged, decomposed petioles of Nymphaea odorata in Florida, USA (Raja et al. 2010b). A gelatinous wing-like sheath surrounds the ascospores in A. evergladensis (Raja et al. 2010b). Alascospora shares similar morphological characters with Minutisphaera, such as subglobose, thick-walled asci and 1-septate, brown ascospores (Raja et al. 2010b, 2015; Ferrer et al. 2011). The sequence data of A. evergladensis are unavailable and the relationship between Alascospora and Minutisphaera is pending molecular data. The holotype of the type species A. evergladensis was examined and described by Pem et al. (2019b). They placed Alascospora in Dothideomycetes genera incertae sedis based on morphology and this was accepted by Wijayawardene et al. (2020). We follow this placement and illustrate the holotype specimen of A. evergladensis in this study (Fig. 131).
List of freshwater Alascospora species
Alascospora evergladensis Raja, Violi & Shearer, Mycologia 102(1): 36 (2010); Fig. 131
Freshwater distribution: USA (Raja et al. 2010b)
Ascominuta Ranghoo & K.D. Hyde, Mycoscience 41: 1 (2000)
Saprobic on submerged wood. Sexual morph: Ascomata solitary or aggregated, partly immersed to superficial, uniloculate, globose, dark brown to black, ostiolate, periphysate. Peridium composed of several layers of hyaline to dark brown, compressed cells of textura angularis. Pseudoparaphyses sparse, cellular, comprising short chains of globose cells, often breaking up into individual cells. Asci 4-spored, bitunicate, globose, short or non-pedicellate, without an apical apparatus. Ascospores overlapping multiseriate, broadly fusiform or ovoid, occasionally curved, hyaline, 1-septate, constricted at the septum, smooth-walled, with a distinct sheath (Ranghoo and Hyde 2000; Hu et al. 2010a). Asexual morph: Undetermined.
Type species: Ascominuta lignicola Ranghoo & K.D. Hyde
Notes: Ascominuta comprises two freshwater species, characterized by globose asci containing four spores and broadly fusiform or ovoid, hyaline, 1-septate ascospores with a distinct sheath (Ranghoo and Hyde 2000; Hu et al. 2010a). Ascominuta was probably an earlier name for Natipusilla based on morphology and habitat (see notes of Natipusilla) (Hyde et al. 2013), but needs to be established by molecular data. Ascominuta was initially placed in Ascomycetes genera incertae sedis (Ranghoo and Hyde 2000), then placed in Dothideomycetes genera incertae sedis (Lumbsch and Huhndorf 2007), which was accepted by Wijayawardene et al. (2018, 2020). Ascominuta lignicola cannot be aligned with other Dothideomycetous species in our sequence dataset, so we exclude this species from our phylogenetic analyses.
Ascominuta lignicola Ranghoo & K.D. Hyde has broadly fusiform ascospores surrounded by an irregular, mucilaginous sheath, while A. ovalispora D.M. Hu & K.D. Hyde has ovoid ascospores surrounded by sac-like, persistent sheath. Ascominuta lignicola has smaller ascospores than A. ovalispora (see key below) (Ranghoo and Hyde 2000; Hu et al. 2010a).
List of freshwater Ascominuta species
*Ascominuta lignicola Ranghoo & K.D. Hyde, Mycoscience 41: 1 (2000); Fig. 132a–c
Freshwater distribution: China (Ranghoo and Hyde 2000), Thailand (Hu et al. 2010b)
Ascominuta ovalispora D.M. Hu & K.D. Hyde, Sydowia 62: 192 (2010); Fig. 132d
Freshwater distribution: Thailand (Hu et al. 2010a)
Key to freshwater Ascominuta species
-
1.
Ascospores 22–25 × 8–10 μm………A. lignicola
-
1.
Ascospores 28–30 × 9–10 μm………A. ovalispora
Lucidascocarpa A. Ferrer, Raja & Shearer, Mycologia 100(4): 642 (2008)
Saprobic on submerged wood. Sexual morph: Ascomata scattered to clustered, immersed or superficial, uniloculate, globose to subglobose, white, membranous, with long, cylindrical, white necks, periphysate. Peridium composed of several layers of elongate, thin-walled, hyaline cells of textura angularis. Pseudoparaphyses absent. Asci 8-spored, bitunicate, fissitunicate, clavate, pedicellate, with gelatinous material around the apex of the endoascus. Ascospores overlapping biseriate, ellipsoidal to fusiform, hyaline, septate, verruculose, thin-walled, surrounded by a large gelatinous sheath (Ferrer et al. 2008). Asexual morph: Undetermined.
Type species: Lucidascocarpa pulchella A. Ferrer, Raja & Shearer
Notes: The monotypic genus Lucidascocarpa, typified by L. pulchella, is unusual in Dothideomycetes. It has white ascomata with long neck, gelatinous material around the apex of the endoascus, and phragmoseptate, rough-walled ascospores surrounded by a large gelatinous sheath (Ferrer et al. 2008). The light coloured ascomata and well-developed sheath of Lucidascocarpa are similar to Aliquandostipite (Jahnulales) (Inderbitzin et al. 2001), but no pseudoparaphyses and wide, brown, septate hyphae in Lucidascocarpa. Lucidascocarpa was suggested in Dothideales based on fissitunicate asci without pseudoparaphyses, but it cannot be assigned to any existing families (Ferrer et al. 2008). It is now placed in Dothideomycetes genera incertae sedis (Wijayawardene et al. 2018, 2020). Distributional studies of freshwater ascomycetes indicated that L. pulchella might be restricted to the neotropics (Ferrer et al. 2008; Shearer et al. 2015). Sequence data of L. pulchella are needed.
List of freshwater Lucidascocarpa species
Lucidascocarpa pulchella A. Ferrer, Raja & Shearer, Mycologia 100: 644, 2008; Fig. 133
Freshwater distribution: Costa Rica and Ecuador (Ferrer et al. 2008), Peru (Shearer et al. 2015)
Monodictys S. Hughes, Can. J. Bot. 36: 785 (1958)
Saprobic on various hosts in freshwater, terrestrial and marine habitats. Sexual morph: Undetermined. Asexual morph: Colonies on natural substrate effuse or sporodochial, green, greenish blue, lavender, blackish brown or black. Mycelium superficial or partly immersed, consisting of branched, septate, thin-walled, smooth or verrucose, pale to medium brown hyphae. Conidiophores micronematous or semi-macronematous, mononematous, scattered or closely packed together in the sporodochia, straight or flexuous, unbranched or irregularly branched, hyaline to brown, septate or aseptate, smooth, thin-walled, sometimes with swollen cells. Conidiogenous cells monoblastic, integrated, terminal, determinate, single, cylindrical, doliiform or subspherical, hyaline or subhyaline. Conidia acrogenous, solitary, dry, simple, oblong, pyriform, clavate, ellipsoidal, subspherical or irregular, rounded at the ends, straight, sometimes spirally twisted, brown to black, muriform, smooth or verrucose, basal cell sometimes inflated, paler and thinner-walled than the other cells. Conidial secession mostly schizolytic (Cai et al. 2006a).
Type species: Monodictys putredinis (Wallr.) S. Hughes
Notes: Monodictys is characterized by muriform, irregular-shaped conidia usually formed on micronematous conidiophores (Cai et al. 2006a). Monodictys species were isolated from wood, leaves, stems, litter, lichens, soil and dung (Seifert et al. 2011), and human skin (Singh and Barde 1985) in freshwater and marine habitats (Rao and De Hoog 1986; Goh and Hyde 1999).
The sexual morphs of several monodictys-like species were linked to Ascotaiwania Sivan. & H.S. Chang, Hyaloscypha Boud., Nereiospora E.B.G. Jones et al., Ohleria Fuckel and Tubeufia based on cultural methods (Samuels 1980; Mouzouras and Jones 1985; Chang 2001; Hosoya and Huhtinen 2002). Monodictys is similar to Berkleasmium Zobel in conidial morphology, but differs by the micronematous conidiophores (Cai et al. 2006a). Monodictys is polyphyletic (Tanaka et al. 2015). The sequence data of the type species M. putredinis are unavailable, thus Monodictys is tentatively placed in Dothideomycetes genera incertae sedis (Wijayawardene et al. 2018, 2020).
Ten species occur in freshwater habitats (see list below) and none of them has sequence data. They can be distinguished by sporodochial conidiomata, conidial shape, size, septa and ornamentation.
List of freshwater Monodictys species
Monodictys castaneae (Wallr.) S. Hughes, Can. J. Bot. 36: 785 (1958)
Basionym: Hyphelia castaneae Wallr. [as ‘castanea’], Fl. crypt. Germ. (Norimbergae) 2: 244 (1833)
Freshwater distribution: USA (Shearer 1972)
Monodictys cruciseptata J.L. Crane & Schokn., in Schoknecht & Crane, Can. J. Bot. 61(8): 2244 (1983)
Freshwater distribution: USA (Schoknecht and Crane 1983)
Monodictys fluctuata (Tandon & Bilgrami) M.B. Ellis, Mycol. Pap. 125: 5 (1971)
Basionym: Acrospeira fluctuata Tandon & Bilgrami, Sci. Cult. 27: 408 (1961)
Freshwater distribution: Thailand (Hu et al. 2010b)
Monodictys melanocephaloides Goh & K.D. Hyde, Fungal Diversity 3: 77 (1999)
Freshwater distribution: China (Goh and Hyde 1999), Thailand (Hu et al. 2010b)
Monodictys pandani Matsush., Matsush. Mycol. Mem. 4: 12 (1985)
Freshwater distribution: Australia (Hyde and Goh 1998a), China (Tsui et al. 2001c)
Monodictys paradoxa (Corda) S. Hughes, Can. J. Bot. 36: 786 (1958)
Freshwater distribution: Thailand (Hu et al. 2010b)
Monodictys putredinis (Wallr.) S. Hughes, Can. J. Bot. 36: 785 (1958)
Basionym: Melanconium putredinis Wallr., Fl. crypt. Germ. (Norimbergae) 2: 181 (1833)
Freshwater distribution: South Africa (Hyde et al. 1998), China (Tsui et al. 2000, 2001c)
Monodictys sessilis Hol.-Jech., in Holubová-Jechová & Mercado Sierra, Česká Mykol. 40(3): 151 (1986)
Freshwater distribution: China (Tsui et al. 2000, 2001c)
Monodictys striata (Petch) V. Rao & de Hoog, Stud. Mycol. 28: 30 (1986)
Basionym: Sporidesmium striatum Petch, Ann. R. bot. Gdns Peradeniya 6(3): 249 (1917)
Freshwater distribution: China (Tsui et al. 2000)
Monodictys trichocladiopsis Goh & K.D. Hyde, Fungal Diversity 3: 79 (1999)
Freshwater distribution: China (Goh and Hyde 1999)
Key to freshwater Monodictys species
-
1.
Sporodochial conidiomata present………2
-
1.
Sporodochial conidiomata absent………4
-
2.
Conidia dictyoseptate………M. melanocephaloides
-
2.
Conidia irregularly septate………3
-
3.
Conidia 16–22 × 27–35 μm………M. striata
-
3.
Conidia 68–115 × 36–48 μm………M. sessilis
-
4.
Conidia < 10 cells………5
-
4.
Conidia > 10 cells………6
-
5.
Conidia globose to subglobose………M. cruciseptata
-
5.
Conidia pyriform to ellipsoidal………M. trichocladiopsis
-
6.
Basal cell conspicuous………M. paradoxa
-
6.
Basal cell inconspicuous if hyaline………7
-
7.
Conidia subglobose to broadly obovoidal, brown to black………M. castaneae
-
7.
Conidia ellipsoidal to elongate, medium brown if obovoidal………8
-
8.
Mature conidia rough-walled………M. fluctuata
-
8.
Mature conidia smooth-walled………9
-
9.
Conidia sessile………M. pandani
-
9.
Conidia with some hyaline or pale brown supporting cells………M. putredinis
Ocala Raja & Shearer, Fungal Diversity 34: 80 (2009)
Saprobic on submerged wood. Sexual morph: Ascomata scattered, immersed or superficial, uniloculate, globose to subglobose, brown to dark brown, or semi-transparent, membranous, with ostiolate papilla. Peridium thin-walled, composed of textura angularis to epidermoidea in surface view. Pseudoparaphyses sparse, cellular, broad, hyaline, septate, branched. Asci 8-spored, bitunicate, fissitunicate, obclavate to fusoid, flattened at the apex, with an elongate, tapered pedicel. Ascospores overlapping uni- to bi-seriate, narrowly ellipsoidal to fusiform, straight or slightly curved, hyaline, phragmoseptate, thick-walled, with or without amorphous apical gelatinous appendages (Raja et al. 2009a). Asexual morph: Undetermined.
Type species: Ocala scalariformis Raja & Shearer
Notes: The monotypic genus Ocala was introduced for a freshwater species O. scalariformis collected from Florida (Raja et al. 2009a). Ocala is characterized by obclavate to fusoid asci, narrowly ellipsoidal to fusiform, hyaline, phragmoseptate, thick-walled ascospores with or without amorphous apical gelatinous appendages (Raja et al. 2009a). The phylogenetic placement of Ocala is questionable because the ex-type strain F121 of O. scalariformis clustered with Natipusilla bellaspora in Natipusillales with high bootstrap support (Raja et al. 2015). However, Ocala has brown to dark brown ascomata, obclavate to fusoid asci and phragmoseptate ascospores contrasting with the hyaline to light brown ascomata, subglobose asci and mostly one-septate ascospores of Natipusilla (Raja et al. 2009a, 2012; Ferrer et al. 2011). We notice that only SSU sequence data of O. scalariformis (NG_061098, F121, from holotype) is deposited in GenBank and included in the phylogenetic analysis of Raja et al. (2015). The phylogenetic placement of O. scalariformis is pending awaiting more sequences. Ocala is presently placed in Dothideomycetes genera incertae sedis (Wijayawardene et al. 2018, 2020).
List of freshwater Ocala species
*Ocala scalariformis Raja & Shearer, Fungal Diversity 34: 80 (2009); Fig. 134
Freshwater distribution: USA (Raja et al. 2009a)
Quintaria Kohlm. & Volkm.-Kohlm., Bot. Mar. 34: 34 (1991)
Saprobic on submerged wood in freshwater or dead tip of prop root of Rhizophora mangle in terrestrial habitats. Sexual morph: Ascomata scattered or loosely gregarious, immersed, with or without clypeus, uniloculate, subglobose to globose, conical with flattened bases or obpyriform, glabrous, dark brown to black, coriaceous or carbonaceous, with ostiolate papilla. Ostiole central or ecentric, circular, short, brown to black, periphysate. Clypeus when present composed of host cells, brown fungal hyphae and melanin particles. Peridium thin to medium, comprising several layers of brown pseudoparenchymatous angular cells mixing with host cells. Pseudoparaphyses numerous, trabeculate, hyaline, branched, anastomosing above the asci, embedded in a gelatinous matrix. Asci 8-spored, bitunicate, fissitunicate, cylindrical to clavate, with conspicuous or inconspicuous IKI negative apical structures, short pedicellate, persistent. Ascospores overlapping bi- to tri-seriate, ellipsoidal to cylindrical or fusiform, straight to slightly curved, hyaline, multiseptate, constricted at the septa, wall minutely verrucose or smooth, guttulate, with or without sheath (Hyde and Goh 1999b; Cai et al. 2006a). Asexual morph: Undetermined.
Type species: Quintaria lignatilis (Kohlm.) Kohlm. & Volkm.-Kohlm.
Notes: Quintaria was initially described for a marine species, Q. lignatilis, which is characterized by immersed ascomata with fusoid, hyaline, multiseptate ascospores (Kohlmeyer and Volkmann-Kohlmeyer 1991). Quintaria is morphologically similar to Trematosphaeria, but can be distinguished by completely immersed ascomata with black incrustations lining the sides of the ostiolar canal, and hyaline ascospores (Kohlmeyer and Volkmann-Kohlmeyer 1991; Zhang et al. 2012b). Quintaria resembles the members of Lophiostomataceae in having cylindrical to clavate asci and fusiform, hyaline ascospores, but they are phylogenetically distant (Suetrong et al. 2009; Zhang et al. 2012b).
The placement of Quintaria is unstable. Quintaria was referred to Lophiostomataceae (Cai et al. 2006a; Jones et al. 2009), Pleosporales genera incertae sedis (Zhang et al. 2012b) and Dothideomycetes genera incertae sedis (Wijayawardene et al. 2017; Hongsanan et al. 2020a) in different papers. Two strains of Q. lignatilis, BCC 17444 and CBS 117700, clustered with Lophiostomataceae and Astrosphaeriellaceae, respectively (Zhou et al. 2013). However, two strains clustered together and close to Testudinaceae in Suetrong et al. (2009) and Zhang et al. (2012b). We found that there are over 100 nucleotide differences in LSU sequence data between BCC 17444 and CBS 117700, which indicates that they are different generic species and even probably belong to different families. The morphology of BCC 17444 and CBS 117700 are unknown, so we can not compare their morphology with the holotype specimen No. 4365a of Q. lignatilis examined by Zhang et al. (2012b). Based on the unstable relationships of Quintaria, the difference of sequences of two strains, we place Quintaria in Dothideomycetes genera incertae sedis, following Wijayawardene et al. (2017), until the new collections of Q. lignatilis are obtained.
Two freshwater species Quintaria aquatica K.D. Hyde & Goh and Q. microspora Yin. Zhang et al. lack sequence data. Quintaria aquatica has larger ascospores than Q. microspora (42–52 × 11–14 μm vs. 26–31 × 5–5.5 μm) and posses a sheath (Hyde and Goh 1999b; Zhang et al. 2008a). Zhang et al. (2012b) suspected that all freshwater species are likely to be excluded from this genus and only the generic type Q. lignatilis retained, but this needs confirmation. The freshwater species Q. submersa K.D. Hyde & Goh now is placed in Neolindgomyces Jayasiri et al. as N. submersus (K.D. Hyde & Goh) Jayasiri & K.D. Hyde based on molecular data (Jayasiri et al. 2019).
List of freshwater Quintaria species
Quintaria aquatica K.D. Hyde & Goh, Nova Hedwigia 68: 258 (1999)
Freshwater distribution: Australia (Hyde and Goh 1999b)
Quintaria microspora Yin. Zhang, K.D. Hyde & J. Fourn., Cryptogamie Mycologie 29: 180 (2008)
Freshwater distribution: France (Zhang et al. 2008a)
Key to freshwater Quintaria species
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1.
Ascospores without sheath………Q. microspora
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1.
Ascospores with sheath………Q. aquatica
Wettsteinina Höhn., Sber. Akad. Wiss. Wien, Math.-naturw. Kl., Abt. 1 116: 126 (1907)
Saprobic or hemibiotrophic on submerged wood in freshwater or plant leaves and stems in terrestrial habitats. Sexual morph: Ascomata small-sized, scattered, immersed with a protruding broad papilla. Peridium composed of several layers of large, polygonal, thin-walled cells. Pseudoparaphyses deliquescing at maturity. Asci bitunicate, fissitunicate, subglobose to obpyriform, sessile, with a small ocular chamber, thick-walled. Ascospores 2–4-seriate, broadly clavate, hyaline and become pale brown when mature, septate, smooth, surrounded by a hyaline gelatinous sheath (Zhang et al. 2012b). Asexual morph: Undetermined.
Type species: Wettsteinina gigantospora (Rehm) Höhn.
Notes: Wettsteinina is characterized by thick-walled, obpyriform asci, asymmetrical ascospores, and lack pseudoparaphyses at maturity (Zhang et al. 2012b). The placement of Wettsteinina is confused because of lack of sequences of the type species, W. gigantospora. Wettsteinina was placed in Pleosporaceae based on its “pleospora-type” centrum (Shoemaker and Babcock 1987), later excluded from Pleosporaceae based on molecular data of three species, but not assigned to other families (Kodsueb et al. 2006). Wettsteinina is placed in Dothideomycetes genera incertae sedis by Wijayawardene et al. (2018, 2020). The molecular data of freshwater species W. moniliformis Van Ryck. & Aptroot and W. niesslii E. Müll. are unavailable. They can be distinguished from each other by the size of ascospores (see key below).
List of freshwater Wettsteinina species
Wettsteinina moniliformis Van Ryck. & Aptroot, Nova Hedwigia 73(1–2): 164 (2001); Fig. 135f–h
Freshwater distribution: Denmark (Van Ryckegem and Aptroot 2001)
Wettsteinina niesslii E. Müll., Sydowia 4(1-6): 204 (1950); Fig. 135a–e
Freshwater distribution: England (Ingold 1955; Apinis et al. 1972; Taligoola et al. 1972), USA (Shearer 1972)
Key to freshwater Wettsteinina species
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1.
Ascospores with pointed ends, 55–70 × 9.5–12 μm………W. niesslii
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1.
Ascospores with rounded ends, 19–23 × 7–9 μm………W. moniliformis
Genus formerly placed in Dothideomycetes
Bahusutrabeeja Subram. & Bhat, Can. J. Bot. 55: 2204 (1977)
Saprobic on submerged wood in freshwater or rotten leaf, wood in terrestrial habitats. Sexual morph: Undetermined. Asexual morph: Colonies hairy on wood. Mycelium mostly immersed, composed of septate, brown hyphae. Conidiophores macronematous, erect, straight, cylindrical, smooth, brown, paler towards the apex, lacking hyphopodia at the base, septate, simple or branched, thick-walled, often proliferating percurrently through the collarette. Conidiogenous cells monophialidic, with a distinct collarette, terminal, integrated. Phialides producing many conidia singly and successively from the tip. Phialoconidia acrogenous, initial conidium pear-shaped, others globose to subglobose, hyaline with granular cytoplasm, aggregated in slimy mass at the tip of the phialide, aseptate, with some slender appendages, with or without a large, lipid globule (Subramanian and Bhat 1977; Tsui et al. 2001a).
Type species: Bahusutrabeeja dwaya Subram. & Bhat
Notes: Bahusutrabeeja was established to accommodate a taxon producing pear-shaped to subglobose, unicellular, hyaline phialoconidia with some slender surface appendages (Subramanian and Bhat 1977). The type species B. dwaya was initially isolated from dead twigs of Coffea arabica in India (Subramanian and Bhat 1977), subsequently collected from freshwater habitats in Hong Kong, China (Tsui et al. 2000, 2001a, c) and Malaysia (Kuthubutheen et al. 1992). The collection from Malaysia (IMI 344362) has longer appendages than the holotype (MUBL 2351) (up to 12 μm vs. 4.5–5.5 μm). The collection of Tsui et al. (2001a) has a large lipid globule, which was not found in other collections.
Bahusutrabeeja dwaya clustered with Neodeightonia subglobosa C. Booth with strong bootstrap support and Bahusutrabeeja was placed in Botryosphaeriaceae (Shenoy et al. 2010). Wijayawardene et al. (2017) listed Bahusutrabeeja in Botryosphaeriales genera incertae sedis. A strain GUFCC 4904 of B. dwaya collected from India (Shenoy et al. 2010), is included in our phylogenetic tree. The result shows that B. dwaya nests between Botryosphaeriaceae and Phyllostictaceae in Botryosphaeriales with strong bootstrap support (Fig. 2). However, Pem et al. (2019b) thought that GUFCC 4904 is a wrong isolation and transferred Bahusutrabeeja to Chaetosphaeriales in Sordariomycetes based on a ITS sequence of CBS 261.77 derived from the ex-type culture of B. dwaya. The hyphomycetous species B. dwaya also can not be placed in Botryosphaeriales based on morphology (Hyde et al. 2013; Crous et al. 2015b; Linaldeddu et al. 2016; Tao et al. 2016). Only ITS sequence of B. dwaya (CBS 261.77) is deposited in GenBank. Additional sequences are expected, so the placement of B. dwaya would be clear with phylogenetic analyses. We follow Pem et al. (2019b) and Wijayawardene et al. (2020) and place Bahusutrabeeja in Chaetosphaeriales (Sordariomycetes).
List of freshwater Bahusutrabeeja species
*Bahusutrabeeja dwaya Subram. & Bhat, Can. J. Bot. 55: 2204 (1977); Fig. 136
Freshwater distribution: China (Tsui et al. 2000, 2001a, 2001c), Malaysia (Kuthubutheen et al. 1992)
Discussion
Studies of lignicolous freshwater fungi have greatly advanced in the last decade, with molecular data allowing a better resolution of species, the linking of asexual and sexual morphs, as well as placements at the family, ordinal and class levels (Zhang et al. 2012a, 2016, 2017a; Su et al. 2016b; Dong et al. 2018; Luo et al. 2019). As a result, many new species have been published (Lu et al. 2018b; Luo et al. 2019; Dong et al. 2020; Hyde et al. 2020b). Many other collections and new records have also been made, but not published as it is hard to find a publishing outlet (Hyde et al. 2020a). With the new AJOM notes (Hyde et al. 2020a), this should become easier, while surveys of fungi in streams with their percentage occurrence and ecology should also be encouraged as in previous earlier papers (Goh and Hyde 1999; Ho et al. 2001; Cai et al. 2003a). Hyde et al. (2020a) noted the need to publish new records and contributed 100 new records and collections of taxa, and found morphology and sequence variability for each taxon. It is, therefore, important to define and understand a species using different collections from different regions or habitats (Hyde et al. 2020d).
Adaptions of freshwater Dothideomycetes to dispersal
Adaptations of microfungi in freshwater were thought to include a) disappearance of an ascus apical ring and release of ascospores via deliquescent asci and b) the presence of ascospore appendages (Shearer 1993a). Hyde and Goh (2003) reviewed the adaptations of filamentous fungi for dispersal in freshwater and should be consulted. The aquatic hyphomycetes generally have spore shapes or trap air bubbles which are conductive for dispersal in water and efficient at becoming trapped in debris or river foam. Ascomycetes on the other hand, have passive of active dispersal of spores from the asci and appendages for effective entrapment in debris or foam. Thus, although release of ascospores is not often seen, an ascus apical ring (often very large) can be seen in many freshwater species (Luo et al. 2019; Hyde et al. 2020a, b, d). We consider the key characteristics in the adaptions of freshwater Dothideomycetes for dispersal in freshwater are 1) the active ejection of ascospores (fissitunicate dehiscence), 2) the ornamentation and appendages of ascospores through which they attach to debris, and 3) some special adaptations of ascomata which hang on mycelial strands as in Jahnulales. In Table 2, the key characters of freshwater sexual genera are summarized with species numbers. Among 30 freshwater genera examined, 22 have ascospores with sheaths, appendages or ornamentations, and three have fasciculate or papilionaceous ascospores (Table 2). These characters are likely to help taxa in dispersal and adapt to life in flowing freshwater. Genera which have with most freshwater species, such as Ascagilis, Jahnula, Lindgomyces and Neohelicascus support our conclusion. Most ascospores in Ascagilis have pads at each end (Figs. 6f, g, 10, 11, see key to freshwater Ascagilis species) or other appendage types. The ascomata of Jahnula are special in having ascomata with a stalk-like strand (Figs. 6c, 7, 9). This possibly enables the ascomata to trail in running water which may aid in the dispersal of ascospores. The ascospores of Lindgomyces usually have a sheath or bipolar mucilaginous appendages (Fig. 57, see key to freshwater Lindgomyces species). Neohelicascus has pseudostromata that comprises brown to black fungal material growing in the host cortex (Figs. 81, 82, 83).
Are freshwater species taxonomically unique?
Marine, freshwater and terrestrial fungi are treated as different groups because they survive in different habitats (Jones et al. 2009, 2019; Suetrong et al. 2009; Doilom et al. 2017; Luo et al. 2019; Dong et al. 2020). In phylogenetic analyses, freshwater fungi mostly group in Dothideomycetes and Sordariomycetes (Luo et al. 2019; Hyde et al. 2020a, b), and some in Eurotiomycetes (Dong et al. 2018, 2020; Yu et al. 2018; Wang et al. 2019). Lu et al. (2018b) showed that many freshwater species clustered in Tubeufiaceae in Dothideomycetes, especially the helicosporous hyphomycetes. Luo et al. (2019) showed that freshwater species mostly clustered in Diaporthomycetidae in Sordariomycetes. In our study, freshwater species mostly belong in Pleosporales and Tubeufiales, some in Jahnulales, Kirschsteiniotheliales, Minutisphaerales and Natipusillales (Fig. 2). These examples indicate that freshwater fungi are a distinctive group, and habitat will affect classification. A good example from our study is Helicascus. Freshwater Helicascus species differ from marine Helicascus species in their asci and ascospores, and our phylogenetic analyses clarifies that they belong in different genera (see entry on Morosphaeriaceae). We suggest that as further genera and species are studied in more detail, this conclusion will become more clear.
Cellular and trabeculate pseudoparaphyses in the classification of freshwater Dothideomycetes
Pseudoparaphyses have always been regarded as an important criterion in the subdivision of Dothideomycetes (Liew et al. 2000). In previous phylogenetic studies, species having trabeculate pseudoparaphyses did not form a monophyletic clade at the ordinal level (Liew et al. 2000). Also, our study reveals that Pleosporales members have two types of pseudoparaphyses, e.g. Astrosphaeriellaceae, including our new genus Aquatospora, have obviously trabeculate pseudoparaphyses (Figs. 28–35), while most members of Lentitheciaceae have cellular pseudoparaphyses (Figs. 49, 52). Natipusillales is distinctive in having sparse or lacking pseudoparaphyses. Jahnulales mostly has cellular pseudoparaphyses, but Jahnula apiospora has obviously trabeculate pseudoparaphyses and differs from other Jahnula species in having asymmetric ascospores (Fig. 6i). The phylogenetic placement of J. apiospora is pending awaiting molecular data, but it clearly does not belong in this order. To clearly describe pseudoparaphyses is important in fungal classification (Liew et al. 2000), and also difficult as in some species they deliquesce at maturity. Therefore, it is important to study the early stages of ascoma, which was earlier proposed by Eriksson (1981).
Future work
The world map in Fig. 1 illustrates the world distribution of freshwater Dothideomycetes. Among 35 countries from where freshwater Dothideomycetes have been collected, China has almost 150 species, followed by Thailand with almost 140 species (Fig. 1). This is undoubtedly because many researchers reside in these areas, however, Thailand has been shown to have an amazing diversity (Hyde et al. 2018b). Studies of freshwater fungi in poorly studied areas (shown in Fig. 1) are encouraged as they should reveal numerous undiscovered species.
It is now becoming more and more urgent to study freshwater fungi due to the melting of glaciers with climate change (Vargo et al. 2020; Wang et al. 2020). This has had a major impact on the global climate, such as storms, flooding, heatwaves and drought. This may cause the disappearance of freshwater in certain areas or periodic drying of streams and rivers and result in the extinction of freshwater species, including fungi (Tsui et al. 1998). Thus the diversity should be studied before it disappears.
Several freshwater genera comprise only a single species (Table 2), e.g. Alascospora evergladensis, Angustospora nilensis and Aquatospora cylindrica. It is highly likely that other species exist as has been shown in Acrogenospora, where nine species were discovered in a relatively small region (Bao et al. 2020). Additionally, some speciose genera (Index Fungorum 2020), contain only a single freshwater species, e.g. Byssosphaeria schiedermayeriana, Herpotrichia dalisayi, Keissleriella linearis, Lophiotrema rubi, Melanomma australiense and Splanchnonema britzelmayrianum. Whether those species are terrestrial immigrants from nearby forests, different genera or regular freshwater inhabitants is unclear. Thus, a better understanding of the ecology of freshwater fungi is needed.
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Acknowledgements
The authors would like to thank the Sichuan Science and Technology Program (Grant No. 2019YFH0175, Grant No. 2018SZDZX0020), the National Key R&D Program of China (Grant No. 2019YFC1803504; Grant No. 2016YFC0502204). Huang Zhang would like to thank National Natural Science Foundation of China (Project ID: NSF 31500017 to Huang Zhang) and State Scholarship fund of China (201908530031). Kevin D. Hyde thanks the Foreign Experts Bureau of Yunnan Province, Foreign Talents Program (2018; Grant No. YNZ2018002), Thailand Research grant entitled Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion (Grant No. RDG6130001). Kevin D. Hyde also thanks Chiang Mai University for the award of Visiting Professor. Mingkwan Doilom would like to thank the 5th batch of Postdoctoral Orientation Training Personnel in Yunnan Province (Grant No. Y934283261) and the 64th batch of China Postdoctoral Science Foundation (Grant No. Y913082271). Rungtiwa Phookamsak thanks CAS President’s International Fellowship Initiative (PIFI) for young staff (Grant No. Y9215811Q1), the National Science Foundation of China (NSFC) project code 31850410489 (Grant No. Y81I982211) and Chiang Mai University for financial support. Sinang Honsanan would like to thank National Natural Science Foundation of China for supporting the project Biodiversity, Taxonomy, Phylogeny, Evolution and Phytogeography of phytopathogens in Dothideomycetes from Southern China (Grant No. 31950410548) for funding this research. Dhanushka Wanasinghe would like to thank CAS President’s International Fellowship Initiative (PIFI) for funding his postdoctoral research (number 2019PC0008), the 64th batch of China Postdoctoral Science Foundation (Grant No. Y913083271) and the National Science Foundation of China and the Chinese Academy of Sciences (Grant No. 41761144055). Saranyaphat Boonmee would like to thank the Thailand Research Fund (No. TRG6180001) and Mae Fah Luang University Research Fund (No. 631C15001). Wei Dong would like to thank Dr. Chayanard Phukhamsakda for her suggestions on the manuscript. Prof. D. Jayarama Bhat is sincerely thanked for his review on hyphomycetes. Dr. Ying Zhang is thanked for her help on the discussion of Neomassariosphaeria. Chenxue Liu, Mingjie Wei, Chunxue Li, Melvina J. D’souza, Dr. Haixia Wu and Prof. Di Zhang are thanked for their helps on the herbarium work. We would like to thank Dr. Shaun Pennycook for his essential nomenclatural review. Kazuaki Tanaka would like to thank the Japan Society for the Promotion of Science (JSPS, 19K06802).
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Dong, W., Wang, B., Hyde, K.D. et al. Freshwater Dothideomycetes. Fungal Diversity 105, 319–575 (2020). https://doi.org/10.1007/s13225-020-00463-5
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DOI: https://doi.org/10.1007/s13225-020-00463-5