Abstract
Anaesthetic molecules act on synaptic transmission via the allosteric modulation of ligand-gated chloride channels, such as hetero-oligomeric α1β2γ2 GABAA receptors. To elucidate the overall activation paradigm via allosteric versus orthosteric sites, we used highly homologous, but homo-oligomeric, ρ1 receptors that are contrastingly insensitive to anaesthetics and respond partially to several full GABA α1β2γ2 receptor agonists. Here, we coexpressed varying ratios of RNAs encoding the wild-type and the mutated ρ1 subunits, which are anaesthetic-sensitive and respond with full efficacy to partial GABA agonists, to generate distinct ensembles of receptors containing five, four, three, two, one, or zero mutated subunits. Using these experiments, we then demonstrate that, in the pentamer, three anaesthetic-sensitive ρ1 subunits are needed to impart full efficacy to the partial GABA agonists. By contrast, five anaesthetic-sensitive subunits are required for direct activation by anaesthetics alone, and only one anaesthetic-sensitive subunit is sufficient to confer the anaesthetic-dependent potentiation to the GABA current. In conclusion, our data indicate that GABA and anaesthetics holistically activate the GABAA ρ1 receptor through distinct subunit level rearrangements and suggest that in contrast to the global impact of GABA via orthosteric sites, the force of anaesthetics through allosteric sites may not propagate to the neighbouring subunits and, thus, may have only a local and limited effect on the ρ1 GABAA receptor model system.
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Introduction
The excitatory and inhibitory ligand-gated ion channels play a central role in the control of synaptic transmission in the central nervous system. Extensively diversified GABAA receptors (γ-aminobutyric acid-gated chloride channels) constitute a principal component of the inhibitory processes1,2,3,4. GABAA receptors are pentamers that can exist as either hetero- or homo-oligomers. Various combinations of homologous subunits with a nomenclature of α (six isoforms), β (three isoforms), γ (three isoforms), δ, ε, π, and θ constitute the hetero-oligomeric receptor-channels (e.g., α1β2γ2 receptors); however, the ρ subunits (three isoforms) aggregate to assemble the homo-oligomeric ρ GABAA receptors (previously known as GABAC receptors, e.g., ρ1 receptor)2. In addition to the GABA-dependent activation via the orthosteric site, structurally diverse compounds, such as anaesthetics, can modulate the GABA-dependent activity of receptors and can directly activate GABAA receptors allosterically, except for the ρ1 receptor, which is insensitive to anaesthetics5,6,7,8,9,10,11. A detailed picture has emerged regarding the positions and the amino acid side chain requirements for anaesthetic- versus GABA-dependent action. Specifically, GABA and anaesthetics act on separate sites, and the crucial amino acids that are required for the effects of GABA are located in the extracellular domain of the receptor, while the residues that are needed for the effects of anaesthetics are situated mainly in the second (TM2) and third (TM3) transmembrane domains. Asn265 in the TM2 and Met286 in the TM3 of the β2/3 subunit have been shown to be the crucial residues for the anaesthetic-dependent action on the hetero-oligomeric GABAA receptor. Converse mutations of the corresponding residues in the ρ1 subunit (Ile307-TM2 and Trp328-TM3) confer sensitivity to structurally distinct classes of anaesthetics, such as barbiturates and benzodiazepines (e.g., diazepam), to the ρ1 receptor7, 12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37. The imparted TM action of diazepam on the ρ1 receptor occurs in the micromolar concentration range (also demonstrated in α1β2γ2) and is distinct from the high-affinity nanomolar effects of the benzodiazepine located at the α-γ interface in the extracellular domain of the α1β2γ2 receptors8, 22, 38. Studies on the ρ1 receptor have demonstrated flexibility in the amino acid side chain requirements for the crucial TM2 and TM3 anaesthetic residues to confer anaesthetic sensitivity. By contrast, even conservative mutations in the crucial amino acids (e.g., Tyr to Phe) in the GABA-dependent activation domain markedly impair the GABA sensitivity13, 14, 39.
The five subunits of a single GABAA receptor exists as a dynamic ensemble that shift between tense and relaxed states in the absence of GABA40,41,42,43,44,45,46,47,48. GABA binds preferentially to the relaxed state in the orthosteric site of the receptor domain, leading to a systematic stabilization of the channel in the open configuration. Studies have elucidated the number of GABA-binding steps that are crucial for maintaining the channel in an open configuration, which is the mechanism underlying the GABA-dependent activation1, 49,50,51,52. For hetero-oligomeric GABAA receptors, such as α1β2γ2, the number of GABA binding steps required to stabilize the channel in its open mode has been shown to be two. In comparison, the number of binding steps (with one GABA binding per subunit) required to maintain the channel in an open configuration in the homo-oligomeric ρ1 receptor is three50, 51. Despite a relatively thorough understanding of the processes involved in the GABA-dependent activation via the orthosteric sites, the mechanism by which anaesthetics act allosterically to open or modulate the GABAA receptors has remained an enigma5, 7, 11, 53,54,55.
In this study, we have shown that specific mutations in the TM2 and TM3 domains of the ρ1 subunit not only confer marked sensitivity to several classes of diverse anaesthetics, including midazolam, diazepam, barbiturate pentobarbital, ketamine, propofol, and etomidate, but also impart the full efficacy of the known partial GABA agonists to the ρ1 receptor. We coexpressed complementory RNAs (cRNAs) corresponding to the wild-type and the anaesthetic-sensitive ρ1 subunits at different ratios to determine the number of anaesthetic-sensitive subunits that are crucial for 1) imparting the full efficacy of partial GABA agonists, 2) conferring anaesthetic sensitivity at the level of direct activation, and 3) conveying anaesthetic-dependent potentiation of the GABA currents. We then demonstrate that, in the pentamer, the number of anaesthetic-sensitive ρ1 subunits needed to impart full efficacy to the partial GABA agonists is three. By contrast, the number of anaesthetic-sensitive subunits needed for direct activation by anaesthetics alone is five, and the number of anaesthetic-sensitive subunits needed to confer the anaesthetic-dependent potentiation to the GABA current is one. Given that GABA-induced subunit level rearrangements to open the channel appear to be different than those that are induced by anaesthetics, the potential characteristics of the interactions between ligands and orthosteric versus allosteric sites of the GABAA receptors are discussed.
Results
Imparting sensitivity to intravenous anaesthetics to the ρ1 receptor
The homo-oligomeric GABAA ρ1 receptor is insensitive to the intravenous anaesthetics etomidate, propofol, ketamine, midazolam, and pentobarbital56, 57. To impart sensitivity to these structurally diverse classes of anaesthetics to the ρ1 receptor, we mutated the ρ1 subunit in TM2/TM3 at positions 307(Ile)/328(Trp). We then examined the responses of the resulting mutants to different concentrations of anaesthetics in the presence of their respective EC4 GABA (for EC50 values, see Table 1). Figure 1 shows the potentiating action of the GABA-evoked current from ρ1 307/328 mutants in response to these structurally diverse intravenous anaesthetics. Several 307/328 double mutations of the ρ1 receptor conferred striking sensitivity to all the aforementioned anaesthetics (Fig. 1). The double mutants containing substitutions of Ile307 with Asn and Trp328 with Met or Ala exhibited a marked sensitivity to etomidate and propofol. Etomidate evoked 130 to 1700% potentiation at 10 to 50 µM of the ρI307N/W328M receptor (see Fig. 1b and Table 2 for the potentiation values). Propofol also markedly increased the GABA currents, resulting in approximately 50 to 500% potentiation of the ρI307N/W328M and ρI307N/W328A receptors (2 to 20 µM, Fig. 1c). We also assessed the sensitivity of a number of ρ1 307/328 mutants to ketamine, which is a dissociative anaesthetic that acts mainly as an NMDA blocker and shows a positive modulatory action on the α6β2/3δ GABAA receptor subtype58, 59. Regarding ρI307N/W328A, ketamine at 50, 100, and 200 µM potentiated the GABA currents by approximately 30–200% (Fig. 1d). The benzodiazepine (midazolam and diazepam) and barbiturate (pentobarbital) classes of intravenous anaesthetics also significantly increased the GABA-induced currents in the 307/328 mutants (2 to 20 µM). The substitutions of Ile307 with Ser and then Ile307 with Asn produced the highest levels of potentiation with midazolam and pentobarbital, respectively (Fig. 1e and f). Overall, the propofol-, etomidate-, midazolam-, and pentobarbital-dependent modulation of the ρ1 307/328 mutants occurred at clinically relevant concentrations. Thus, the 307/328 mutations conferred marked sensitivity to several classes of diverse anaesthetics including midazolam, pentobarbital, ketamine, propofol, and etomidate.
Pentobarbital and benzodiazepine diazepam were capable of directly activating the ρ1 307/328 mutants at relatively higher concentrations. Figure 2a and d depict the current traces and the concentration-response relationships for pentobarbital and diazepam in the ρ1, ρI307S/W328I, and ρI307S/W328V receptors. The wild-type ρ1 receptor was found to be insensitive to the direct action of these anaesthetics (Fig. 2). By contrast, both pentobarbital and diazepam directly activated the ρ1 307/328 mutants in µM concentrations. Pentobarbital activated ρI307S/W328I with an EC50 of 181 ± 19 µM and a slope of 2.19 ± 0.09, while the corresponding numbers for the action of diazepam on ρI307S/W328V were 102.3 ± 5.9 µM and 5 ± 1. The maximum current amplitudes that were elicited by pentobarbital and diazepam relative to those elicited by GABA were approximately 0.94 in the ρI307S/W328I receptors and 0.68 in the ρI307S/W328V receptors (see Table 3 for the relative maximum amplitudes).
In summary, concomitant substitutions of ρIle307 with Asn or Ser and ρTrp328 with Met or Ala imparted sensitivity to five structurally distinct anaesthetics to ρ1 receptors. In the anaesthetic-sensitive hetero-oligomeric α1β2γ2 GABAA receptor, Asn and Ser were found at the corresponding TM2, while Met and Ala were found at the equivalent TM3 positions of the β2 and α1 subunits, respectively, thereby validating the use of the ρ1 receptor as a model system to study the mechanism of action of anaesthetics.
Co-impartation of full efficacy to partial agonists
The GABA agonists imidazole 4-acetic acid (I4AA) and (Z)-3-[(aminoiminomethyl)thio] prop-2-enoic acid (ZAPA) are partial agonists of the ρ1 receptor but act as full agonists at the α1β2γ2 GABAA receptors60, 61. We then examined the action of the GABA agonists I4AA and ZAPA in the ρ1 307/328 mutants. Several 307/328 mutations, which have been shown here to confer sensitivity to anaesthetics to the ρ1 receptor, also converted the partial agonists I4AA and ZAPA into full agonists. Figure 2b and d show the GABA- and I4AA-induced current traces and the concentration-response relationships in the ρ1, ρI307S/W328I, and ρI307S/W328V receptors. The maximal current amplitudes elicited by I4AA and ZAPA relative to those elicited by GABA in the wild-type ρ1 receptor were approximately 0.04. In marked contrast, both I4AA and ZAPA were full agonists in ρI307S/W328I or ρI307S/W328V (Both I4AA and ZAPA elicited maximal currents relative to that of GABA that were greater than 0.95, Table 3, Fig. 2c). In conclusion, the 307/328 mutations not only conferred sensitivity to diverse classes of anaesthetics but also imparted full efficacy to the partial agonists I4AA and ZAPA in the ρ1 receptor.
Differential contributions of Ile307 and Trp328
We then asked whether the Ile307 and Trp328 mutations contribute differently to the conversion from partial to full GABA agonists and the impartation of anaesthetic sensitivity. To dissect the individual contribution of each mutation, the current maximal value of the I4AA relative to that of GABA was determined in the mutants ρI307S (or N) and ρW328M. The single substitution mutation of Ile307 with Ser (ρI307S) or Ile307 with Asn (ρI307N) conferred nearly full efficacy to I4AA (a maximum-induced current of ~70% with respect to that of GABA). By contrast, I4AA was a partial agonist of ρW328M with an efficacy that was similar to that at the ρ1 receptor (Table 3). It has been shown previously that ρI307S displays a relatively low pentobarbital sensitivity at the potentiation level (with no apparent direct agonist action)20. By contrast, a substitution of Trp328 alone in the TM3 with any hydrophobic residue (e.g., ρW328M) imparts a high sensitivity to pentobarbital to the ρ1 receptor at both the potentiation and direct activation levels (with maxima relative to that mediated by GABA of 10 to 20%)19. Thus, in the double mutant (e.g., ρI307S/W328I), the Ile307 to Ser substitution contribute to the increasing efficacy, whereas the Trp328 mutation is key to conferring anaesthetic sensitivity to the ρ1 receptor.
Distinct activation by GABA versus anaesthetics
We utilized the capacity of the ρ1 307/328 mutations, which collectively impart full efficacy to otherwise partial GABA agonists and anaesthetic sensitivity, to compare the mechanism of activation of GABA agonists to that of anaesthetics. Using co-injection of cRNAs for the wild-type and the mutated ρ1 subunits at different ratios to express different ensembles of receptors containing five, four, three, two, one, or zero mutated subunits, we attempted to identify the number of mutated subunits that is sufficient 1) to confer full efficacy to otherwise partial GABA agonists and 2) impart anaesthetic sensitivity. Prior to the experiments, the maximal GABA-induced current amplitudes of the key mutants (ρI307S/W328I and ρI307S/W328V) relative to that of wild-type were first examined following equivalent injections of each mutant versus wild-type cRNAs (see Materials and Methods). These experiments yielded maximal GABA-induced currents in ρI307S/W328I and ρI307S/W328V relative to that for wild-type ρ1 of 0.93 and 0.43, respectively (Table 4). Thus, ρI307S/W328I exhibited a maximal GABA-induced current that was nearly equal to that of the ρ1 receptor, while for the ρI307S/W328V, this value was approximately half of that of the ρ1 receptor. Then, the cRNAs of ρ1 and ρI307S/W328I or ρ1 and ρI307S/W328V at ratios of 1:6, 2:5, 3:4, 4:3, 5:2, and 6:1 (ρ1: ρ307/328 mutants) were co-injected to express distinct ensembles of the following six subpopulations of receptors: homo-oligomers of wild-type and mutant subunits and hetero-oligomers containing one, two, three, and four mutated subunit(s). For the controls, the cRNAs of ρ1, ρI307S/W328I, or ρI307S/W328V were also injected individually. In each injected oocyte, we then determined the maximal currents evoked by GABA, I4AA, ZAPA, and pentobarbital after injections of different ratios of ρ1: ρI307S/W328I, ρ1 and ρI307S/W328I; we further determined the maxima of GABA, I4AA, ZAPA, and diazepam with varying ratios of ρ1:ρI307S/W328V, ρ1, and ρI307S/W328V. The maximal currents that were evoked by I4AA, ZAPA, and the anaesthetics were then normalized to their respective GABA maximal current values (see Materials and Methods). The averages of the relative current maxima (to that elicited by GABA) with I4AA, ZAPA, or pentobarbital with ρ1; ρI307S/W328I; 1:6, 2:5, 3:4, 4:3, 5:2, and 6:1 cRNA ratios of ρ1: ρI307S/W328I are presented in Fig. 3 whereas the averages of the relative current maxima (to that of GABA) with I4AA, ZAPA, or diazepam with ρ1; ρI307S/W328V; and varying ratios of ρ1: ρI307S/W328V are shown in Fig. 4. With increases in the ratio of the wild-type to mutated cRNAs, a progressive reduction in the relative current maxima (to that elicited by GABA) for I4AA, ZAPA, pentobarbital, or diazepam was discernible, but the degree of the overall decline at each ratio was markedly greater with the anaesthetics (diazepam or pentobarbital) than the GABA agonists (I4AA or ZAPA). For example, for the 1:6 ratio of ρ1: ρI307S/W328I cRNAs, the relative current maxima (to that mediated by GABA) decreased to approximately 0.87 with both GABA agonists, i.e., I4AA and ZAPA (from 0.98 in the homo-oligomeric ρI307S/W328I); the corresponding values of the 1:6 ratio of ρ1: ρI307S/W328V declined to 0.79 and 0.82 with I4AA and ZAPA, respectively (from ~0.95 in ρI307S/W328V, Supplementary Information-Datasets). By contrast, the relative current maxima of pentobarbital or diazepam (to that elicited by GABA) at 1:6 (ρ1: ρ307/328 mutants) exhibited a significantly greater decline compared to that of I4AA or ZAPA, thereby diminishing the corresponding value of the 1:6 ratio of ρ1: ρI307S/W328I to 0.47 with pentobarbital (from 0.94 in ρI307S/W328I) and of the 1:6 ratio of ρ1:ρI307S/W328V to 0.23 with diazepam (from 0.68 in ρI307S/W328V). The differential reductions in the relative current maxima (with respect to that induced by GABA) between the GABA agonists and the anaesthetics continued after increasing the ratio of the wild-type to the mutated cRNAs, showing a greater prominence with diazepam. The decline in the relative current maximum (to that of GABA) with diazepam was markedly greater than that with pentobarbital across the different ratios, which may be due to 1) the lesser maximum current with diazepam (to that mediated by GABA) in the homo-oligomeric ρI307S/W328V than that with pentobarbital in ρI307S/W328I and 2) the lower GABA maximal current (based on maximal GABA-induced current for ρI307S/W328V relative to that for wild-type, at equivalent cRNA injection) of ρI307S/W328V compared to that of the wild-type (Table 3).
We used a binomial equation to determine the relative quantities of the receptor sub-populations that contained five, four, three, two, one, or zero mutated subunits at each ratio and assumed an equivalent assembly of wild-type and mutated subunits (Fig. 3a, Supplementary Information-Datasets). Then, using an iterative process, we conducted simulation studies to determine the likelihood of contribution of each sub-population of receptor(s) in the ensemble toward the total response to I4AA, ZAPA, or the anaesthetics. In the subpopulation ensembles at each ratio, the experimentally determined values were utilized for the homo-oligomers of the wild-type or mutated receptors, while, depending on the model, all (homo-oligomeric mutant-like activity) or none of the weight (wild-type-like activity) was assigned to the hetero-oligomeric receptors that contained four, three, two, or one mutated subunits with unknown activity. Three different models were tested. In the first model, the contribution of only the subpopulation of homo-oligomeric mutant receptors with all the weight activity (homo-oligomeric mutant-like activity) given to the overall current was considered; the remainder of the sub-populations was speculated to have wild-type-like activity (close to zero). In the second model, two receptor sub-populations in the ensemble were simulated to have all the weight mutant-like activity, including the homo-oligomer of the mutant and the hetero-oligomer with the four mutated subunits. The remainder of the four subpopulations was presumed to have wild-type like activity. Finally, in the third model, three subpopulations of receptors containing five, four, and three mutated subunits were assumed to exhibit mutant-like activity, while the remaining three subpopulations were believed to exhibit wild-type-like activity. In the simulation of the total activity at each ratio, the known (homo-oligomer) values and the presumed (hetero-oligomer) values for each receptor sub-population were multiplied by the corresponding sub-population fraction that was present in the ensemble (determined using a binomial equation). The resulting values were then summed (For details regarding the simulation procedures, see Methods and Supplementary Information-Datasets). In comparison to the wild-type, all simulations were corrected for the lower maxima current (relative to that mediated by GABA) of diazepam or pentobarbital in the homo-oligomeric ρI307S/W328V or ρI307S/W328I, as well as the lower GABA maximal current of ρI307S/W328V (based on maximal GABA-induced current for mutant relative to that for wild-type, at equivalent cRNA injection). The conclusions were unaffected even if no corrections for the differences in the GABA-induced maxima were included in the simulation steps for ρI307S/W328V (see Supplementary Information-Datasets). Figures 3 and 4 show the three simulations for the ρ1:ρI307S/W328I and ρ1:ρI307S/W328V co-expression studies (in the form of bars and different shades of grey). A comparison of the data points with the three different simulations at each ratio demonstrated that the summation of the contributions of the receptors containing three or more mutated subunits (i.e., the summation of the receptors containing five, four, and three mutated subunits) with mutant-like activity best matched the experimental data of the GABA agonists I4AA and ZAPA (denoted by a hash # on the bar, Figs 3c and 4b). In striking contrast, the model simulation that represented only the contribution of the homo-oligomer of the 307/328 mutant subunits with mutant-level activity (only the receptor sub-population of five mutated subunits) corresponded to the experimental data of pentobarbital (Fig. 3c, denoted by a hash #) and diazepam (Fig. 4b, denoted by a hash #).
Then, we constructed diazepam concentration-response relationships for the 1:6 and 2:5 ratios from the ρ1: ρI307S/W328V experiments. These experiments were carried out to determine whether the diazepam-induced current arises solely from a single sub-population of receptors (ρI307S/W328V) or a mixture of homo- and hetero-oligomeric receptor-channels (with different EC50s and slopes) in the co-expressional experiments. The derived EC50 and Hill coefficient in these experiments were nearly identical to the corresponding values in the ρI307S/W328V receptor (Table 1), indicating that the diazepam-induced current observed in the experiment using the 6:1 or 2:5 ratios of ρ1: ρI307S/W328V cRNAs arose mainly from the sub-population of the homo-oligomeric ρI307S/W328V.
In summary, our data indicate that GABA and anaesthetics act via distinct mechanisms in terms of the number of mutated subunits that are necessary for direct activation; three 307/328 mutated subunits are sufficient for the GABA-dependent action, while the corresponding mutations must be present in all five subunits for the anaesthetic-dependent activation to transpire.
A single mutated subunit confers anaesthetic-dependent potentiation of GABA currents
We then examined the mechanism underlying the anaesthetic-dependent modulation of the GABA current by deciphering the minimal number of mutated subunits that are necessary to confer potentiation. The co-expression of cRNAs for the wild-type with ρI307S/W328Y or ρI307S/W328A at different ratios were used to determine the mechanism underlying the anaesthetic-dependent potentiation at the subunit level. The ρI307S/W328Y receptor showed a high sensitivity to diazepam, while the ρI307S/W328A receptor exhibited a marked sensitivity to pentobarbital in potentiation action (see Tables 1, 3, and 4). At equivalent cRNA injection, ρI307S/W328A exhibited a maximal GABA-induced current that was nearly equal to that of the ρ1 receptor, while for the ρI307S/W328Y, this value was approximately 0.6 of that of the wild-type (Table 4). The GABA concentration-response relationship was constructed for ρI307S/W328A and ρI307S/W328Y. These experiments demonstrated that the ρI307S/W328A and ρI307S/W328Y mutants had GABA EC50s that were similar to those of the wildtype (~1 and 0.5, respectively, compared to 0.6 µM in the wild type). This finding was an important consideration since the degree of the potentiation magnitude is highly dependent on the relative GABA-induced activity of the receptor-channel22. To determine the minimal number of mutated subunits that are necessary to confer potentiation, the cRNAs of ρ1 and ρI307S/W328Y or ρ1 and ρI307S/W328A were co-injected at ratios of 22:1, 5:2, 4:3, 3:4, and 2:5 (ρ1: ρ307/328 mutant). In the presence of the approximate EC4 GABA, the extents of the diazepam- (30 µM, for ρI307S/W328Y) and pentobarbital- (20 and 50 µM, for ρI307S/W328A) dependent potentiation were then determined at each ratio. Figure 5 shows the pentobarbital (ρI307S/W328A)- and diazepam (ρI307S/W328Y)-dependent potentiation levels of ρ1, ρI307S/W328A, ρI307S/W328Y, as well as of different ratios of ρ1: ρI307S/W328A and ρ1: ρI307S/W328Y. In the presence of the EC4 GABA, pentobarbital (50 µM) caused only a minuscule change in the GABA currents arising from the ρ1 receptor but increased the corresponding GABA current of ρI307S/W328A by 870 ± 89% (Table 2). At the 22:1 ratio (wild-type:mutant), assuming an equal assembly of wild-type and mutant subunits, the binomial calculations predicted that 80% of the constituted receptors in the ensemble were wild-type, while the remainder were comprised of primarily hetero-oligomeric receptors with only a single mutated subunit (four wild-type, Fig. 5a). At the 22:1 ratio of ρ1: ρI307S/W328A, pentobarbital (20, 50, 100, or 200 µM) produced a potentiation that was significantly greater than that in the wild-type (Fig. 5c and d; statistically greater than wild-type, p < 0.05, Supplementary Information-Datasets). In the diazepam-dependent modulation, there was also a statistically greater potentiation compared to that in the wild-type in the experiments corresponding to the 22:1 ratio of ρ1: ρI307S/W328Y (Supplementary Information-Datasets). Thus, in contrast to the direct receptor activation by diazepam or pentobarbital, the modulatory properties of the anaesthetics can be imparted to the receptor sub-population containing a single mutated subunit.
To study the mechanism underlying the anaesthetic-dependent modulation, we constructed models to carry out potentiation simulations at each ratio. For these calculations, we used the experimentally determined potentiation values for the subpopulation of receptors corresponding to the homo-oligomers of the wild-type or mutant subunits. However, the values of the potentiation magnitude arising from hetero-oligomeric receptors containing one, two, three, or four mutated subunit(s) were unknown and were therefore estimated by reducing the known potentiation values of the mutated homo-oligomers by ~0.5n (0.47n, 0.5n, and 0.53n for pentobarbital; 0.57n, 0.6n, and 0.63n for diazepam), where n represents the number of the wild-type subunits in the pentamer. The numbers (~0.5n) used in these simulations to estimate the potentiation values of the hetero-oligomeric channels at the tested concentrations of the anaesthetics were derived using an iterative process. The total potentiation simulations at each ratio, as shown in Fig. 5, were then calculated by multiplying the known (for homo-oligomers) and the presumed (for hetero-oligomers) potentiation values by the corresponding fraction of the subpopulations that were present in each ensemble (determined using the binomial equation) followed by summing the resulting values (Supplementary Information-Datasets). Figure 5 depicts the three simulations for each co-expression at different ratios of wild-type:mutant experiments (in the form of horizontal lines, different shades of grey). For each ratio, the simulation numbers corresponded closely to the data points of the pentobarbital- or diazepam-dependent potentiation (Fig. 5c and e). An examination of the simulated potentiation values of each receptor sub-population reveals that the sequential replacement of each wild-type subunit with a mutant subunit in the pentamer did not appear to increase the potentiation levels synergistically in the tested concentration range of the anaesthetics. For example, a single hetero-oligomeric receptor with two mutated subunits (of ρI307S/W328A) generates a potentiation level (e.g., 0.53(# of wild-type subunits)*870%) that is nearly equal to the sum of the potentiation values of two receptors each having a single mutated subunit (e.g., 0.54(# of wild-type subunits)*870% + 0.54*870% = 2*0.54*870% = 1*0.53*870%).
Collectively, these studies demonstrate that the magnitude of the potentiation declines sequentially along with the reduction in the number of mutated subunits in the pentamer. Importantly, receptors that contain even a single mutated subunit are sensitive to the potentiation action of the anaesthetics.
Discussion
Using coexpression of cRNAs for the wild-type and mutated (307/328) ρ1 subunits at different ratios, we demonstrate that the number of anaesthetic-sensitive ρ1 subunits crucial for imparting full efficacy to the partial GABA agonists in the pentamer is three, while the number needed to confer anaesthetic sensitivity at the level of direct activation is five. Importantly, the number of anaesthetic-sensitive ρ1 subunits needed to convey potentiation by the anaesthetics is one.
Mutations in the key residues ρIle307 and ρTrp328 play distinctive roles in the co-impartation of the full efficacy to the partial GABA agonists (I4AA) and anaesthetic sensitivity to the ρ1 receptor. Both Ile307 and Trp328 are located at the hydrophobic/hydrophilic interface in the upper leaflet of the membrane bilayer; however, the Trp side chain not only constitutes the largest volume among all amino acids, but it also has the potential to anchor the TM3 polypeptide to the membrane interface. Mutations in ρTrp328 could dislodge the TM3 from the membrane interface and create a void, thus exposing the delicate gating components to anaesthetic action. However, the substitution of the highly hydrophobic ρIle307 with the hydrophilic Ser can shift the gating component, which is located in the TM2, closer to the hydrophilic upper leaflet, hence contributing to an increase in the efficacy of the GABA agonists (and allosteric agonists). Collectively, the double 307/328 mutations may create novel relaxed state(s) with relatively reduced free energy levels of activation44, in which access to or efficient alignment with the molecular actions of anaesthetics is probable.
Our key finding is that the activation of GABAA receptors by GABA via orthosteric sites compared to that by anaesthetics via allosteric sites requires numerically distinct subunit level rearrangements. In the GABA-dependent activation mode, the number of GABA binding steps (at the orthosteric sites) needed to open the channel differs between the homo-oligomeric ρ1 and the hetero-oligomeric α1β2γ2 receptors3, 49,50,51,52, 62, 63. It is currently well-established that for the ρ1 receptor, the required number of GABA bindings to open the channel is three (one per subunit, with five total subunits)50, 51, while for the α1β2γ2 receptor, the required number of GABA bindings is only two49, 64 (one per β-α subunits; out of five). This raises the following question: what are the underlying structural and mechanical differences underlying the lower efficiency that is observed in the GABA-dependent activation of ρ1 compared to that of α1β2γ2 receptor? The α1β2γ2 receptor exhibit fixed stoichiometry with two non-equivalent, but predetermined, GABA binding sites intermittingly positioned at the β-α interface of the pentamer (See Fig. 6), which is similar to the homologous hetero-oligomeric nicotinic acetylcholine receptor65. GABA agonists bind to the extracellular domain in the interface of the two subunits with an asymmetrical geometry, presumably via a strong electrostatic bonds66, 67. Thus, the binding of GABA to the higher affinity site may impart structural perturbation to the two subunits, leading to a facilitation of subsequent secondary binding in the α1β2γ2 receptor. Consequently, the sequential but intermittent bindings of two GABA molecules at the orthosteric sites have the capacity to impact four subunits, thus rendering them into the relaxed state. In comparison, for the ρ1 receptor, the first binding can occur randomly at any of the five potential GABA binding sites at the interface, potentially transforming two subunits into their relaxed states. This first binding then cooperatively facilitates the second consecutive binding at the adjacent subunit. However, the perturbation (stabilization) caused by the secondary binding to the ρ1 receptor may transmit to only three subunits. Therefore, to complete the stabilization of the four subunits into their relaxed states, GABA binding to a third consecutive site is needed (see the presented model in Fig. 6). Therefore, in a model where rendering four subunits into the relaxed state via the orthosteric sites dictates an open configuration, the number of GABA molecules required for the α1β2γ2 receptor binding is two, while for the ρ1 receptor, the number required is three. Thus, through efficient inter-subunit action (location) and the presumed strong nature of its binding force, GABA can exert a relatively global action on the structure of the receptor-channel68. In contrast to GABA action, our data support the notion that anaesthetics act locally and transmit a more limited force on the stabilization of the channel in the open configuration. The following three findings support the local effects of anaesthetics: 1) Anaesthetic molecules act allosterically in the channel in the transmembrane medium close to the gating component likely through a weak hydrophobic interaction. 2) The five-subunit (the entire pentamer) requirement to confer anaesthetic-dependent direct activation indicates the weak nature of the transduction in opening the channel. 3) A single anaesthetic-sensitive subunit, paradoxically, confers an anaesthetic-dependent potentiation, but the addition of each mutated subunit does not appear to increase the potentiation levels synergistically. How can one explain the differences in the requirement for activation versus modulation (all 5 subunits versus 1 subunit)? In the modulatory mode, in a model in which three sequential GABA binding events stabilize the channel in the open state, the anaesthetic-dependent activation of a single subunit needs to enhance the binding of GABA to the receptor only in the first binding step, thus increasing the efficiency of the subsequent GABA bindings and the eventual channel opening. Collectively, these findings indicate that, unlike GABA, the force of anaesthetics does not appear to propagate to the neighbouring subunits, is limited in its scope and poses only a local effect on the channel.
The interaction between the GABA agonist and the orthosteric sites required to open the channel has been evolutionarily optimized through precise/specific positioning of the GABA binding sites, the tuning of the inter-subunit dynamics, and the facilitation of the transduction/stabilization processes. Anaesthetic effects, by contrast, appear to be more generic, their site of action is not as fine-tuned, and their transduction/stabilization is not as enhanced. In the evolutionary ladder of ligand-gated ion channels, the hetero-oligomeric receptors (e.g., α1β2γ2) evolved more recently69. The fact that two versus three GABA molecules are needed to bind the receptor to open the hetero- versus homo-oligomer of GABAA receptors suggests that the optimization in terms of the tuning of the inter-subunit dynamic and the facilitation of the transduction/stabilization processes has resulted in a binding/opening process in the hetero-oligomeric α1β2γ2 that is more efficient than that in the ρ1 receptor. Thus, the difference in the α1β2γ2 receptor versus the ρ1 receptor predicts that in the allosteric-dependent activation by anaesthetics, the number of subunits required to bind (sense) the anaesthetic may be lower in the α1β2γ2 receptors relative to that in the ρ1 GABAA receptors.
Our findings demonstrate that, in comparison to GABA, anaesthetic molecules not only use a different site of action but also exhibit a different activation paradigm to maintain the channel in the open state. Thus, allosteric molecules such as anaesthetics can modulate GABA-gated ion channels in a dynamically distinct fashion.
Methods
Oocyte preparation and electrophysiology
The oocyte isolation, site-directed mutagenesis, complementary RNA (cRNA) synthesis, cRNA injection into the oocyte, the drug perfusion system, and the oocyte electrophysiology have been previously described22, 58. The quality of the cRNAs was determined by electrophoresis of set dilutions of the cRNA on a 1% formaldehyde-containing agarose gel. The amount of cRNA was first determined and matched by interpolation of lanes containing different dilutions of the cRNA and then quantified spectrophotometrically. Following the injection, the oocytes were incubated in a solution containing the following (in mM): 5 HEPES, 82.5 NaCl, 2.5 KCl, 1 CaCl2, 1 MgCl2, 1 Na2HPO4, and 2.5 Na pyruvate, with the pH adjusted to 7.5 with NaOH. This mixture was supplemented with 50 U/ml penicillin, 50 µg/ml streptomycin, and 2% horse serum. The oocytes were maintained at 14 °C. The recording solution (OR2) contained the following (in mM): 5 HEPES, 92.5 NaCl, 2.5 KCl, 1 CaCl2, and 1 MgCl2, with the pH adjusted to 7.5 with NaOH. All methods relating to animal procedures were approved by Animal Care and Use Committee of University of South Florida, and were carried out in accordance with Guidelines of the National Institute of Health for the Use of Laboratory Animals.
Comparison of the wild-type and mutant expression levels
To measure the expression levels of the key mutant subunits (ρI307S/W328I, ρI307S/W328V, ρI307S/W328Y, and ρI307S/W328A) relative to those of the wild-type subunits, the cRNAs of the wild-type or mutant ρ1 subunit were injected individually into sets of oocytes at equal quantities. The same needle was used for the injections of the wild-type and the mutant cRNA to ensure equal quantities of the cRNA injection. The needle was washed several times between injections to avoid cross contamination. The maximal GABA-induced currents were then determined 4 days post-injection (see Supplementary Information-Datasets). To evoke the maximal GABA current in the wild-type and mutant subunits, concentrations of GABA equivalent to 20 to 100 times the corresponding EC50 values were used. The average and SEM of the maximal elicited GABA current were first determined for each injection set of the wild-type and mutant subunits. To calculate the relative expression levels of the key mutants, the average of the maximal GABA current in the mutant was divided by the average of the maximal GABA current in the wild-type (Table 4).
Determination of the maximal current in the co-expressional studies
To evoke the maximal current for the wild-type, mutant, and different wild-type:mutant ratios, concentrations of agonists equivalent to 3 to 100 times the corresponding EC50 values were used. To determine the maximal-induced current of the different agonists, each oocyte injected with cRNA of ρ1, ρI307S/W328I, ρI307S/W328V, different ratios of ρ1: ρI307S/W328I, or that of ρ1: ρI307S/W328V was tested with two applications of GABA, followed by applications of two GABA agonists (I4AA and then ZAPA), anaesthetics, and finally GABA again. Washes of several minutes each were conducted between applications. To determine the relative maxima, the maximal current values for each I4AA, ZAPA, or anaesthetic were then normalized to their respective maximal GABA current values. The current values used in the calculations were limited to those with a magnitude that was less than 1 µA.
Data fitting and binomial calculations
The data points for the concentration-response relationships were fitted to the following logistic equation:
where I is the peak current at a given concentration of agonist A, and Imax is the maximum current. EC50 is the concentration of the agonist yielding a half-maximal current, and n is the slope.
The EC4 values were determined based on the concentration-response relationships. The extrapolated values were tested and then adjusted empirically.
The fraction of each sub-population of receptors (containing five, four, three, two, one, or zero mutated subunits) at each ratio was determined using the binomial equation based on the following assumptions: (1) the receptor is a pentamer, (2) the efficiency of the assembly was not affected by the mutations, and (3) the two different stoichiometries present in the receptor chimaeras containing two or three mutated subunits are equivalent in function. The binomial equation is as follows:
where for a given ratio, r is the number of wild-type subunits incorporated at a given time (e.g., 3); n is the number of subunits in the receptor complex (5); P(r) is the sub-population fraction of the receptor comprising the r wild-type subunits; and p and q are the probabilities of the wild-type and the mutant subunit assimilation, respectively. For example, for the 6:1 ratio of the wild-type to mutant injection, p is equal to 6/7, while q is equal to 1/7.
The percent increases in the GABA currents induced by the anaesthetic (% potentiation) were calculated using the following equation:
where IGABA is the current value elicited by a given concentration of GABA, and IGABA+Anaesthetic is the evoked current induced by the same concentration of GABA plus the anaesthetic.
Mathematical simulations
To determine the number of mutated subunits that are required for the activation by the GABA agonist compared to that required for the activation by the anaesthetics, simulations were carried out by assigning experimentally determined values to the sub-population of the homo-oligomers of the wild-type (wild-type-like, close to zero activity) or mutated receptors (mutant-like, close to 100% activity). For the hetero-oligomer receptors containing four, three, two, or one mutated subunits (with unknown activity), depending on the model, either all (homo-oligomeric mutant-like activity) or none weight (wild-type-like activity) was assigned to each receptor sub-population. Three models were considered as follows:
-
1)
The contribution from only the subpopulation of the homo-oligomeric mutant receptors with all weight activity (homo-oligomeric mutant-like activity, ~100%) on the overall current was considered; the remainder of the sub-populations was then speculated to have wild-type-like activity (close to zero).
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2)
Two receptor sub-populations in the ensemble were simulated to have mutant-like activity. These included the homo-oligomer of the mutated subunit and the hetero-oligomer with four mutated subunits. The remaining four subpopulations were presumed to have wild-type-like activity.
-
3)
Finally, three subpopulations of receptors containing five, four, and three mutated subunits were assumed to exhibit mutant-like activity, while the remaining three subpopulations were instead assumed to have wild-type-like activity (Figs 3 and 4; see Supplementary Information-Datasets for the simulation steps).
To derive the final value of each ratio, the known (homo-oligomers) and the presumed values (hetero-oligomers) of each receptor sub-population were multiplied by the corresponding sub-population fraction present in the ensemble (determined using binomial equation), and the resulting numbers were then summed.
To correct for the differences in the expression levels (determined based on maximal GABA-induced current for mutant relative to that for wild-type, at equivalent cRNA injection), between the wild-type ρ1 and ρI307S/W328V and the ρ1 and ρI307S/W328Y in the simulations, the relative sub-population (fraction) of the receptors containing five, four, three, two, one and zero mutated subunit(s) at each ratio was first estimated using the binomial equation, which assumed the equal assembly of wild-type and mutated subunits. Each subpopulation of receptors was then corrected for the difference in GABA maximal using the following procedure. First, the determined fraction (binomial calculation) of each receptor subpopulation containing 3 or more mutated subunits in each ensemble was multiplied by the relative GABA maximal determined for the mutant (e.g., ~0.5 for ρI307S/W328V, mutant-like expression), while the expression of the receptor subpopulations containing 3, 4 and 5 wild-type subunits was corrected by the wild-type-like expression in terms of GABA maximal (~1). Second, the products from the first step were summed. Finally, each receptor sub-population, corrected for its GABA maximal levels, was normalized to the derived sum in the second step (Supplementary Information-Datasets). Notably, the number of required mutated subunits for the GABA agonist-dependent versus the anaesthetic-dependent activation and the number of mutated subunits needed for potentiation were unaffected if the lower maxima of ρI307S/W328V or ρI307S/W328Y were not considered in the calculations of the simulation studies (Supplementary Information-Datasets).
To conduct the simulation of the anaesthetic-dependent potentiation at each ratio, we used experimentally determined potentiation values for the sub-populations of homo-oligomers of ρI307S/W328A and ρI307S/W328Y receptors in the ensemble. The values of the potentiation magnitude arising from hetero-oligomeric receptors containing one, two, three, and four mutated subunit(s) (unknown) in the ensemble were estimated by reducing the known potentiation values by ~0.5n (0.47n, 0.5n, and 0.53n for pentobarbital, 0.57n, 0.6n, and 0.63n for diazepam), where n represents the number of the wild-type subunits in the pentamer. The numbers (~0.5n) used for these simulations were determined using an iterative process. To calculate the final values for the potentiation simulations at each ratio, the known (homo-oligomers) and the presumed (hetero-oligomers) potentiation values for each receptor sub-population were multiplied by the corresponding sub-population fraction present in the ensemble (determined using the binomial equation). The resulting values were then summed. The detailed steps of all simulation procedures corresponding to the I4AA-, ZAPA-, anaesthetic-dependent direct activation, and anaesthetic-dependent potentiation are presented as excel spreadsheets in the Supplementary Information-Datasets.
Reagents
Drugs and chemical were purchased from Sigma-Aldrich, except for diazepam and propofol (Biomol) and ZAPA (Tocris). Diazepam, propofol, etomidate and midazolam were first dissolved in DMSO. The final solutions of these drugs were prepared by adding the stock to a rapidly agitating solution of OR2. Other drugs were directly dissolved in OR2.
Statistics
A student’s t-test (two-tailed, Sigma Plot) was used to determine the statistically significant differences between the values of the anaesthetic-dependent potentiation at different ratios of wild-type to mutant versus the ρ1 receptor (Supplementary Information-Datasets). All data are presented as the Mean ± Standard error (s.e.m.).
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Acknowledgements
The authors thank Stephen Hadley for his technical assistance during the initial stages of the work, and Joshua Ortiz and Rajay Seudath for their help with the collection of the preliminary data. We would also like to extend our gratitude to both reviewers of the manuscript for their accurate assessments and just criticisms, which have resulted in significant improvements in the manuscript. This work was funded by the Established Investigator Award from the American Heart Association (to J.A.).
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J.A. designed the research study; M.S.S. and J.A. conducted the experiments, performed the data analysis and contributed to the writing of the manuscript.
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Amin, J., Subbarayan, M.S. Orthosteric- versus allosteric-dependent activation of the GABAA receptor requires numerically distinct subunit level rearrangements. Sci Rep 7, 7770 (2017). https://doi.org/10.1038/s41598-017-08031-9
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DOI: https://doi.org/10.1038/s41598-017-08031-9
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